LOC110503974


Basic Information

Item Value
gene id LOC110503974
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 25583941 ~ 25589424 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036964726.1
ATGCTTGTTTTAGTCCTGGAGCAACTCTCCAAACAGGACCCCTTGCTCTCCTTGGAGAAGGACCAGGTGAAGCTACTGTCACGCTTTGAGGCCCTGTTCCAGGAATACTACAACAGACCTTACCCAGGCCAAGCCCAGAACATTGCACTAGGCCTAGGCACTAAGCAGCTGGAGAATCTGACTAAAGTGGAACAGGTGAACCTAGCCTTCACCACAGCCTTCTGGAAGATGGACCGGCTCCTGGGGCTTGGCAAGGACGAGACCTCCAAGATCCGCTGGAGTGGTTGCACAGCGCTATTCTGCCTTATCGACAGTGGGCTGCCCTCCTCAGACGAGAAGGAGCAGGGTACAGGACAGGAGAGTAATATACCAAAGCCCTCACAGGAGTTACAGGGTGGAAGAATTCTCATTGCTGACTGTGGTAAAGTCCATTCGGAGCGCAAACACATCCTCTGGTCCGGAGAGACAATCAGCATCAACAAACAGCACGGTCTGGTGGAGTGGCTGACCAAGGCCACCCGAGTGCTTAGTCATTATGGCGATCGCAAGCTGAAGTCAGTCATCCCTGTGCCTTACTCTGTGTCGCTGCCCACGGACCCATCCTACCAGCTGCTGGTTCTAGCGTCCAGTGACCTCTGGGAAGTATTGGATGATCACGCATCCTGCAGCAGGAGTGAGGTCAATGTGAAGGAAACTATGGCTGACAGTCTGAAGAATCTCACCTTGAACTACGAGTGCCTTGCAGCTGACATTTGTAGAGAGCTAATGGACACAGTGTTGGTCTCAGGTTCaaaggaaaacatttcagtcatgACGGAGATGTCGTCATCTCGGCAGCAGGTGCAAGGGGGAATGCTTGATTTGATAGTCCTTACCTGA

Function

NR:

description
protein phosphatase 2C-like domain-containing protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036964726.1 True 879 mRNA 0.52 5 25583941 25589424

Neighbor

gene id symbol gene type direction distance location
LOC110515528 LOC106582056 coding downstream 8134 25568039 ~ 25575807 (-)
LOC110515443 LOC106605270 coding downstream 62112 25465851 ~ 25521829 (-)
LOC110515384 LOC106582009 coding downstream 347405 25171287 ~ 25236536 (-)
notchl LOC106581966 coding downstream 458499 25119183 ~ 25125442 (-)
LOC110515302 LOC106581964 coding downstream 472825 25107822 ~ 25111116 (-)
LOC110515569 LOC106605268 coding upstream 7280 25596704 ~ 25643498 (-)
LOC110515676 LOC106582133 coding upstream 210813 25800237 ~ 25810648 (-)
LOC110515750 LOC106582146 coding upstream 233388 25822812 ~ 25825108 (-)
LOC110515765 LOC106582155 coding upstream 248213 25837637 ~ 25854424 (-)
ica1 LOC106582178 coding upstream 294394 25883818 ~ 25895863 (-)
G239133 NA non-coding downstream 5246 25577220 ~ 25578695 (-)
G239050 NA non-coding downstream 42537 25540874 ~ 25541404 (-)
G238922 NA non-coding downstream 119394 25464226 ~ 25464547 (-)
G238816 NA non-coding downstream 191311 25392404 ~ 25392630 (-)
G238802 NA non-coding downstream 202190 25381521 ~ 25381751 (-)
G239138 NA non-coding upstream 1927 25591351 ~ 25591550 (-)
G239402 NA non-coding upstream 221781 25811205 ~ 25813187 (-)
G239480 pngf non-coding upstream 242588 25832012 ~ 25834240 (-)
G239502 NA non-coding upstream 285387 25874811 ~ 25875963 (-)
LOC110515208 LOC106581894 other downstream 617733 24936516 ~ 25052970 (-)
LOC110515154 LOC106605289 other downstream 813618 24767049 ~ 24799511 (-)
G237832 NA other downstream 1062397 24521219 ~ 24521544 (-)
G237657 LOC106605316 other downstream 1399977 24180556 ~ 24183964 (-)
G240409 NA other upstream 979677 26569101 ~ 26569522 (-)
G240464 NA other upstream 1085168 26674592 ~ 26675033 (-)
LOC110516631 LOC106582601 other upstream 1481631 27070914 ~ 27097259 (-)
LOC110516667 LOC106582624 other upstream 1522758 27111084 ~ 27127488 (-)

Expression


Co-expression Network