si:dkey-256h2.1 (pngf)


Basic Information

Item Value
gene id si:dkey-256h2.1
gene name pngf
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 25825181 ~ 25837840 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021594512.2
GCGCCCACTTCATACATCCCTTGGAATAAACAAGGAAGTACTCGTTATTGTACAATCTGTCAAGTCCTGGCTTAATGCTATcagtttaataaaaaaataaaaaaaataataataatacatattttgCATTTAAACAGCAATGACCCAAGATACTGCTGTGTGCAAATTGATTTAGAAAATTATCGACATACCGCCACAGTTGTGGGAGGAACAAATGGCTTGGTTATCATCAACTTTGGTGCTGTGCTGCTTAACAGTAACGTTAGGCCTACATGTAATTCAAATTGATGCAACAGCGAAAATCAGAGGGATGAAGTCAACTCATAATTTAGACTACGACGAGCGTGAATTCTCACCATCTACATTTGCGCATAGCACCATCAACTTCGGATCCAAAATAACTCTTCAACAAGTCACAGAATTGGAGCCAGGTAACACAGCTCCAGCTTTCAAAGTGGTAACCCTTGATGGAGAATTCGTTTACCCGCCACTTGCAGGGTTGAAAGGGCCATTGATAATTCATGCTTTTACCAACAAGTCTGCCTTTTTGGAGTGCCTGTGGAACTCCGAGTCGTCATTAACCGACTTGGTCCAGAACCTACCCGATAGCACACAAGTCCTCTTCGTGTCTcttgatgacagctctgtcaACGATGCCTTATGGATGAGAGATCAAGTCCTTCGGGTAACATCGCATAGAAAGAAAGAGGTTTTGTCCAGATTGCACTTCTCCCCTGTTCCTGTATTTTGTTTGGGAAACTGGATTCCCAGTGTGCTGTACTCTTGGGGTTGTTCCGGACACAACTGTGGCCTTTCTCAGGCAGTTTTTACATCTACAGGGTGGAATATGCCGGTGATTGTCAAGAGACTTGATGCGCGATACGATTGGCTGATGGGCTCCTGGAGCCAGATGAAACACCAGTTGATTGATGCAGGCAATGGATGTGAGCCCGCCCCCTCCGCTGCAGGTGCTGTTGCCTGGGTTTCCGAGGGCAACTGCTCCTTTTTCACCAAGGTGAAGAACATGGCCAAGTCCAATGCCACGGGTGTCCTTGTCCATGCAGGTCCTGGAAACCCGATCCAGGATATGAACTGTGTGGGAGACGAATGTTCTACGCCACTAGGCATACCTGCTGCCATGGTGCATTGCGAGCCCTCGGTAGCCCAGGCCCTTAGatATGGGCACATGGTGAACGTGTCCTTTCAGAGTACCCCCTCTCCAAACTTCTTCATTGGCATTGACCAGCAGGGGGCACTGTCTGAGATGGGCTGGTTCCTCTACCCCTCCTTTAAGTTTATCAACTGGCAGGCCCAGTGGTTTGATTTCTATGAAGGGCTTCAGACTAGACTCCATGACCCAGCCTGGGTGGTCCCTGTGTTTGAGAAGGTCCAGATGCAAGGACAGAGTGGAGCAGTAGCCACTGTGAACCTGCCTTCTGACATGTTGGATTTTGACATGCTGGAGCTGGACGCGTCTCTGTCCTGTCCCAGCGAGAGGGATGACTCCTGCGCCCACTGGGaccacactgtgcagctgtttGTGTGCTGTGACCATTTCAGTCCCCACTGCAACATGGAGATGGGGCGCTGGATAACAGCCTTCCGCAGAGGCATTGGGCGCTGGCTCACTGATGTTTCTCCTCTGGTGCCTCTGTTGGACAATGGGAGATGTACCTTCACCATGAAGACTGTGCCTTGGGCTATGCCCTGGGTGGTGTCTCTGAGTCTGAGATTCAGCCACACAAATCACTCAACCAATCACTCAGACAAGCTTTACCCCTTTAAGCTGATGTCATTGTACAGTGGAGGCACCTTTGACAAGGAATACAACAAGAGATACCAACCAATCAAATTCACTGTCCCAGACTCAACAAAAAAGGTGGAGTTGTATGCCGTAATCACAGGCCACGGGAGCGACGAGAACGGCTGCTGCGAGTTCTGTGTGACATCACACCACTTCCTCGTCAACGGAGCATTCAATAACACCCGTATTTTTGACTCGGCAGGTTCAGCCCTGGGGTGTGCCATGCGGGTGGGAGAGGGGGCGGTGCCCAACGAGCATGGCACTTGGCTGTACGGCCGTGGAGGCTGGTGTGATGGGCTACAGGTCAACCCCTGGAGGTTTGACATCACCACACAGCTGGACATGAGTGGGATTGAAGCCAATACTCTGCTCTACTTTGGCCTTTACAGTGGACAGGACCCCAATCCGTCTCACGACCCTGGCTACATTGTCATGTTCTCTTATCTGGTGTTCTACAAGTAGTCTCCCTGACAACCAGGTTGTCTTGAATGTGAATTGTAATGACTGTGATTAATGCGAATGAGAACCAATCATGCTAAAATATAAATTTTATCCAGTAATATTGTAGCCTATTCTATGTTTGGGTGTGTCACCAACTTGCACTGTTTTCCCACTCAAGAGTTTTCACTCAAGTTCGATACAAAGAAGACGTCATCTTGAATAGCTCATTTTGCTCTTCAGAAAAGTTGAAGGAGTTATTGCTATCTTGCTACTTAACCTGGTCAAGTATGTGTAATTACACAAACTTAGCTTTTAGTGTCAAACTTAAACTTTCAGGTGACGACAAGACGCTTTTCCTGACGCAAGATCAACCACTCTCTGATCCTTCAATTATTCAAGTATCTCTTTTTGAACGGTTTACCTGCAAAGGTTAGAGGAGTGGGGGTTGGTTACATTTGCCACCACAGACACGAATGCATTAAACAGTGTAATATTTCTGAAAATGTGAAAATATATCTGGATGTTCAAATTAA

Function

NR:

description
uncharacterized protein LOC110515712

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016715 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021594512.2 True 2778 mRNA 0.47 12 25825181 25837840

Neighbor

gene id symbol gene type direction distance location
LOC110515724 LOC106582140 coding upstream 2060 25811027 ~ 25823121 (+)
LOC110515656 LOC106582123 coding upstream 24958 25782275 ~ 25800223 (+)
LOC110515629 LOC106582110 coding upstream 53388 25760214 ~ 25771793 (+)
LOC110515611 LOC106582094 coding upstream 67940 25747786 ~ 25757241 (+)
LOC110515597 LOC105021876 coding upstream 77777 25717287 ~ 25747404 (+)
LOC110515778 LOC106582151 coding downstream 17515 25855355 ~ 25865532 (+)
LOC110515810 LOC106582161 coding downstream 28333 25866173 ~ 25883288 (+)
LOC110515888 LOC106582194 coding downstream 211481 26049321 ~ 26057011 (+)
LOC110515914 LOC106582211 coding downstream 230702 26068542 ~ 26070879 (+)
LOC110515923 LOC106582214 coding downstream 277442 26115282 ~ 26117797 (+)
G239217 NA non-coding upstream 115477 25709421 ~ 25709704 (+)
G239196 NA non-coding upstream 140554 25684411 ~ 25684627 (+)
G239073 NA non-coding upstream 233297 25591619 ~ 25591884 (+)
G239043 NA non-coding upstream 263376 25561588 ~ 25561805 (+)
G239280 LOC106582155 non-coding downstream 1762 25839602 ~ 25840173 (+)
G239295 NA non-coding downstream 49650 25887490 ~ 25887835 (+)
G239296 NA non-coding downstream 54444 25892284 ~ 25894425 (+)
G239321 LOC106582184 non-coding downstream 108955 25946795 ~ 25947982 (+)
G239604 LOC106582196 non-coding downstream 236608 26074448 ~ 26075042 (+)
G239026 NA other upstream 283568 25540769 ~ 25541613 (+)
G238540 LOC106582009 other upstream 625947 25195287 ~ 25199234 (+)
G238050 NA other upstream 1049236 24775279 ~ 24775945 (+)
G238047 NA other upstream 1058818 24765666 ~ 24766363 (+)
G238034 NA other upstream 1074798 24749405 ~ 24750383 (+)
G239697 LOC106582257 other downstream 375802 26213642 ~ 26220183 (+)
G239752 meox2 other downstream 489568 26327408 ~ 26328331 (+)
G240244 NA other downstream 1213346 27051186 ~ 27051954 (+)
LOC110516767 LOC106605158 other downstream 1418748 27240708 ~ 27264405 (+)
G241150 LOC106582751 other downstream 1718332 27556172 ~ 27558532 (+)

Expression

si:dkey-256h2.1(pngf) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 15.
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si:dkey-256h2.1(pngf) Expression in each Bioproject

Bar chart with 21 bars.
si:dkey-256h2.1(pngf) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
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Co-expression Network