LOC110515972 (LOC106582276)


Basic Information

Item Value
gene id LOC110515972
gene name LOC106582276
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 26275762 ~ 26316108 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021594663.2
TGGAGAGTGAAATAAAACGACACAATTATCTCGCAGTTCAAATGACGTTTGATGACTGTGCGAGTATCACCCGGTAGTTAAAATTCCCCAGAGGATCGGTTTAGCATCACCTTGGGTAGAGGGATTGAAGGTGCATACAATGGCGCAATTCATGGATGTCGTCTCATTGACCAAGGGAATTCGGTCCATGTTTTACATTGTCACACCGAACGAATCATCATTTGAAAATGTGGAGGATGTCCCGCCATATGTTCAACAGGCCACCCCGTTCTTTATGGGCTTGATGGTTGTCGAGCTGGTGGTGAGCCTGCTGAAGGATGGAACCCCATTGGCCTGCGTCAGTGATGTCGTCACCTCAGTGTCAGCTGGTATCATTTCCAGAATGCCCACGCTATTTGCAAGAGGTTTTGAAATAACGACTTACATCTACGTGTGGGACAACTTGCGTCTCCTGGAGCTACCCTGGGACTCTGCCTGGGCATGGTGGCTGGCTTTCCTAGTGGTGGACTTCAGCTACTACTGGGTCCATCGCTTTGCTCACGAGTTGAACTTCCTGTGGGCTGCCCACCAGGTCCACCACAGCTCAGAGTACTACAACCTTTCCACAGCCCTCAGACAATCCCTCACACAGCAGTTCTCATCATGGGTGTTCTATCTCCCCATGGCGTTGGCAGTACCACCCTCTGTGTTTGCTGTTCACATCCAATTCAACCTGCTCTACCAGTTCTGGATCCACACTGAGCTGATCAGAGATTTGGGACCTCTGGAGTGGGTCCTAAACACCCCCAGTCACCACAGAGTTCACCACGGGCGAAATGAATATTGCATTGATAAGAATTACGGGGGAGCTCTGATAATATGGGACAGACTATTCGGTACCTTTGCTCCAGAGGGCAATAAAGTTGTCTACGGTCTCGTAcacaaaataaacacatttgagATCTTCCATATTCAGTTCCATTACTATAAATACTTGTGGAGGAGGTTCAACAGATACAAGAAAATCTTCAATAAATTGGGCGTCCTCTGGAAAGGACCCAGTTGGAAACCTGGCAAACCAAGGCTGGGGGATCACGCAGAGGTGCCCGAGGTTACTGGAGAAGAGCTGCCATTCAATCCCAGTTGGCCTCTGGCTCTGAAAGTCTATGTCTGCATACATGGTCTAATGTTGTTGGGTGTTTACCAGGATCTGTTTGAGTCAAGGCTGATGCTATCCCAGCTGACTGTTCTGATGATGACTGGCTATATTCTACTCAGTCTGACCTCCATTGGCTTCATCATTGACCAACGGCCAACGGCACCCATGTTGGAGTTTTTGCGCTGTGTTCTGATGATGATGCTGCATCGATATGGCTACATGACTGCACCAGCACCACTGTTTGTGCCCATTGAGgcCTTTGTCTCCATCTCCCTGCTGTACTGGGGCCTGCAGACATTCAGCCAATTGATTTCAGTCAAGAAGAAGACAACATGAGATTGTCAGGTCCCATTGGCTTACTGTACCTGGCTCCATCAAATGTTTGAAGGACTTTAGCCATGACTTTAGGTAGCCACACTTTCCCACATATTAACCAACATACAAGCTTCTATGAATCATATAATATATGTAATGTGCATATCTTGCCTCATAATAATATTTGTTAATGTTTTTAATCGGACAAGCATAGTGTGTATGAATGGCCATAGGCACTATACCTTTATGGCCATGCTTAGTGTTTCTACGTTTCTTATGGAAGGTAGCTTTTCTGATTTTGTTCAAATTGTACTGTTATATGGTGCTATTCAGTGATTGATTGATGACAATCAATGTAATACATTCCTGTTTAGTGAGCCATTGAGAATATTATGAATGACTTTTAAAACTGTCTTCACCTACACCTTTACCTGTACAACAAATACCTCCTAAAACTGCAGGGTAACTTTTCCTAGGATCCCTTTTTTCATGAAATGTAATACTTCTTAACTCTATATTTTTCAGTTCCATTTTTCACTAAACAGTTTTCTGTTA

Function

NR:

description
alkylglycerol monooxygenase

GO: NA

KEGG:

id description
K15537 AGMO; alkylglycerol monooxygenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021594663.2 True 2008 mRNA 0.45 13 26275762 26316108

Neighbor

gene id symbol gene type direction distance location
LOC110515948 LOC106582257 coding downstream 22812 26188922 ~ 26252950 (-)
LOC110515941 etv1 coding downstream 89728 26167468 ~ 26186034 (-)
LOC110515898 LOC106582196 coding downstream 181543 26071056 ~ 26094219 (-)
LOC110515882 LOC106582184 coding downstream 251205 25918915 ~ 26024557 (-)
LOC110515870 LOC106584533 coding downstream 357281 25911707 ~ 25918481 (-)
LOC110515986 meox2 coding upstream 1466 26317574 ~ 26331168 (-)
LOC110515999 LOC106582287 coding upstream 35052 26351160 ~ 26387451 (-)
LOC110516015 LOC106582291 coding upstream 73703 26389811 ~ 26392182 (-)
LOC110516029 ankmy2 coding upstream 80708 26396816 ~ 26401897 (-)
LOC110503977 bag6 coding upstream 92376 26408484 ~ 26424365 (-)
G239864 NA non-coding downstream 66658 26208684 ~ 26209104 (-)
G239853 NA non-coding downstream 88559 26187003 ~ 26187203 (-)
G239836 NA non-coding downstream 129259 26146220 ~ 26146503 (-)
G239822 NA non-coding downstream 149628 26125883 ~ 26126134 (-)
G239515 NA non-coding downstream 218761 26055575 ~ 26057001 (-)
G239904 NA non-coding upstream 4207 26320315 ~ 26320540 (-)
G239939 NA non-coding upstream 54644 26370752 ~ 26370991 (-)
G240348 NA non-coding upstream 99294 26415402 ~ 26443224 (-)
G240371 NA non-coding upstream 150327 26466435 ~ 26466854 (-)
LOC110515750 LOC106582146 other downstream 451005 25822812 ~ 25825108 (-)
LOC110515384 LOC106582009 other downstream 1039395 25171287 ~ 25236536 (-)
LOC110515208 LOC106581894 other downstream 1309554 24936516 ~ 25052970 (-)
LOC110515154 LOC106605289 other downstream 1505439 24767049 ~ 24799511 (-)
G237832 NA other downstream 1754218 24521219 ~ 24521544 (-)
G240409 NA other upstream 252993 26569101 ~ 26569522 (-)
G240464 NA other upstream 358484 26674592 ~ 26675033 (-)
LOC110516631 LOC106582601 other upstream 754947 27070914 ~ 27097259 (-)
LOC110516667 LOC106582624 other upstream 796074 27111084 ~ 27127488 (-)
LOC110516678 LOC106605187 other upstream 839460 27154680 ~ 27159987 (-)

Expression


Co-expression Network