LOC110515986 (meox2)


Basic Information

Item Value
gene id LOC110515986
gene name meox2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 26317574 ~ 26331168 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021594668.2
GGCCTGCATACATGTGGCACAGCCGGCTGCAGTAGCATAGTCTCTGAAGCTCTGGTGTGTGTGGTACTGACCATGATGCCTAAGCAATAAGCATTAGCCGTACATCAGGTGAACACATGCAGCTATTGGAATATCTTGATTGATCGAAAAAGGtctccagtctcctctctctcctgtcatctgAGAATCTCTCCGGCAGCTTATCTAGGGTTCACTGTTTATCCTGCGCAGCCTGGCAACTGTCCGCATGCCCAGGATTATTACTGGAGCCCCCTTtcaacacacacacggacatacaCACAACTTTTTTATCGAACTCTTATCAAGGAGACGAATTTGGGGTGAGCTAAGGAAAGAGCACAAGTTGTGGATTTTGGATCTTCTGTGTTTTGTTTGAccctttttttttatatatatatatttttaacttaGTTGGCTTACTTTTTTGTTACGTTTCATTTTTTGTCCCCCTCCTTATCTTTCTGGAGGGCTGTGTGTTTGCATGCGATGGATCACACACTCTTTGGCTGCCTCCGCAGCCCCCATGCCACTGTGCAGGCCCTGCACCCTGCCTTCACCCAGTCTCCGCTGACTCTCCACGGACGCACGGACCACGTCTCCTACCCTGACCTGGCCTCTTCCACCGCCACCTCCTCTCCTTCGGCCTGCATCATCTCCGGCTATCCCGGTGACGAGGGCCTGTTCGGTGGGCATCACCACCATCACCGTGGGCATCACCCGGCACAGCAACAGCAGCATCACCCGCCTCAGCACCAGGCTGGCTGGCACATTCCACAGATGCCCTCTCCTGGCAATGCGAGCTCCCGCCACAACCTCtgccacccccacccccactctCACTCGGCCCAGGACAGTGCCCTCGCACCCCCAGACCTAGGCACCCCTGGCAGGAACAGTCTCTGTTCCAGCACCCCCAACCTGGGCAGCAGCACCCCCACaggggccaattgtgtgcctgCAGACTTTGGAAGACAGACACTGTCACCTGCTGAGGCAGAGAAGAGAAATGGCAAGAGGAAAAGTGACAGCTCAGAGTCCCAAGACGGGAATTACAAGTCAGATGTGAGCAGCAAACCCAGGAAGGAGCGGACGGCGTTCACCAAAGAGCAAATCCGTGACCTGGAGGCCGAGTTCGCCCATCACAACTATCTGACGAGACTGAGGCGCTACGAGATAGCAGTCAACCTCGATCTCACAGAGAGACAAGTAAAGGTGTGGTTCCAGAACAGGAGAATGAAGTGGAAACGAGTAAAAGGAGGTCAACAGGGGGCTGTAGCGAGGGAAAAGGAACTGGTGAACGTGAAAAAGGGGACATTGCTGCCGTCCGAATTCTCCAGCATAGTGGCTCTTCATCACTCCACAGACTCCCTGGCCAATGAGGACAGTCACGAAAGCGACCAGAGTTCTGAGCATGCTCACTTATGATGCACAGCAGCAGGCCACTCCTACACAAAGTGGGTTCAGCCTCACATCTCAGGAACGTCCTTAAAAGGACATGTTATCTGGTCGTCATTAGCAAAGTTTAACGATGCTAAATAAATGTGTACAAATGTACAAAGAAATGACGTGTGTTACTTGATCTAAGAAGATACATGTTAGGACGTTGGTTAAACCAAACTAAGATCACCAATACGTTTCAAGAACTGCGAACCCAACGCAGGAATATGAGATATTGCAAAAGGTCAATGCACATTAAGCATACGTTACGAACGTGCTTCCACTCAACACTGCTCTTGGAAGCAGAACATATTCTTTGAATATTAGGACAGATTCAGAATTGGCCGAATTGTTATGAACATTCCATGTTGTGTGTCTTACATTGAAAAAGGGGCAAGTTCATGCTTTTGATTTGCACTGGTGAACACTTGCCTCAATTGGTTTCTACTGTTTGTCATAAAAATTGCGATGTAATCAAATTATTATCAAGTGTGCGGGAGAATCAAATTTGCTCAGCTAATATACAGTATACTCTGAACTTAATTATCTGTCATTTTCTTACCTTTTCTCTAGCAACAATTTCTAATACACACTATACCACTCACACAGTAATAAACATTTATGATGTT

Function

symbol description
meox2 Enables DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in negative regulation of cell migration involved in sprouting angiogenesis and positive regulation of transcription by RNA polymerase II. Located in cytoplasm and nucleus.

NR:

description
homeobox protein MOX-2-like isoform X1

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K09322 MEOX, MOX; homeobox protein MOX

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021594668.2 True 2087 mRNA 0.48 4 26317574 26331168

Neighbor

gene id symbol gene type direction distance location
LOC110515972 LOC106582276 coding downstream 1466 26275762 ~ 26316108 (-)
LOC110515948 LOC106582257 coding downstream 64624 26188922 ~ 26252950 (-)
LOC110515941 etv1 coding downstream 131540 26167468 ~ 26186034 (-)
LOC110515898 LOC106582196 coding downstream 223355 26071056 ~ 26094219 (-)
LOC110515882 LOC106582184 coding downstream 293017 25918915 ~ 26024557 (-)
LOC110515999 LOC106582287 coding upstream 19992 26351160 ~ 26387451 (-)
LOC110516015 LOC106582291 coding upstream 58643 26389811 ~ 26392182 (-)
LOC110516029 ankmy2 coding upstream 65648 26396816 ~ 26401897 (-)
LOC110503977 bag6 coding upstream 77316 26408484 ~ 26424365 (-)
trnaa-ugc-3 NA coding upstream 130681 26461849 ~ 26461922 (-)
G239864 NA non-coding downstream 108470 26208684 ~ 26209104 (-)
G239853 NA non-coding downstream 130371 26187003 ~ 26187203 (-)
G239836 NA non-coding downstream 171071 26146220 ~ 26146503 (-)
G239822 NA non-coding downstream 191440 26125883 ~ 26126134 (-)
G239515 NA non-coding downstream 260573 26055575 ~ 26057001 (-)
G239939 NA non-coding upstream 39584 26370752 ~ 26370991 (-)
G240348 NA non-coding upstream 84234 26415402 ~ 26443224 (-)
G240371 NA non-coding upstream 135267 26466435 ~ 26466854 (-)
G240384 NA non-coding upstream 142601 26473769 ~ 26474043 (-)
LOC110515750 LOC106582146 other downstream 492817 25822812 ~ 25825108 (-)
LOC110515384 LOC106582009 other downstream 1081207 25171287 ~ 25236536 (-)
LOC110515208 LOC106581894 other downstream 1351366 24936516 ~ 25052970 (-)
LOC110515154 LOC106605289 other downstream 1547251 24767049 ~ 24799511 (-)
G237832 NA other downstream 1796030 24521219 ~ 24521544 (-)
G240409 NA other upstream 237933 26569101 ~ 26569522 (-)
G240464 NA other upstream 343424 26674592 ~ 26675033 (-)
LOC110516631 LOC106582601 other upstream 739887 27070914 ~ 27097259 (-)
LOC110516667 LOC106582624 other upstream 781014 27111084 ~ 27127488 (-)
LOC110516678 LOC106605187 other upstream 824400 27154680 ~ 27159987 (-)

Expression


Co-expression Network