LOC110516029 (ankmy2)


Basic Information

Item Value
gene id LOC110516029
gene name ankmy2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 26396816 ~ 26401897 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021594678.2
ACACGTGGTACAGTCTGAAACCACCAGTTTAACCCCAACAGCCAGCTAGCAAGCTTCAGAATGAAAACCAAACAACGTGATAGTCTATAATTTAGTTTCACTCATAATTATCCATATTTGTCTTATGTCATTGActgatttttttaaacacacaatTCTAGCCAATATGTCAGCTCCGAAGAAGGGAGATCTATCTCCCACGGAGAGGGAATTATTCGTAGTTATTGCTGCAGGAAATGTTCAAGAAGCCTCAAGATTATTGGGCTGCAAGGATGTCAGAGTCAACTGTTTGGATGAGAATGGGATGACACCCCTCATGCACGCTGCATACAAGGGCAAGGCGGACATGTGCAAGCTGCTACTGCAACATGGGGCAGATGTGAACTGTAATGAACACGAGCATGGATACACGGCACTGATGTTCGCCGGGCTATCAGGTAAGACTGATATCACCTGGATGATGTTAGATGCAGGAGCGGAGACAGATGTGGTCAACTCCGTCGGGCGAACAGCATCTCAGATGGCTGCGTTTGTCGggcAGCACGACTGTGTGACGGTGATCAACAACTTCTTCTCGCGGGCCAAGCTGGAGTATTACACCAAACGCCAGGGGCTGGAGAAGGAGCCCAAGCTGCCCCCCAAACTGGCAGGGCCCCTCCACAAGATCATCATGAGCACCAACCTCAACCCCGTCAAGATGGTGCTTCTGGTGAAGGAGAACCCGGTGCTGGCCGAGGTGGAGGCCCTGGAGAAGTGCCGGCGGGTGATGGAGCTGATCTGTGAGAAGTGTGTGAAGCAGCAGGACATGAACGAGGTGCTGGCAATGAAGATGCACTACATTAGCTGTGTGCTGCAGAAGTGTGCCTCCTTCCTCAAGGAGCGTGATGACAAGCTGGAAGGACTCATCAAGAGCTTGTTGAAGGGCCGGGACAGTGACGGCTTCCCGCTGTTCCAGGAGAAGTTCATCAGAGAGTGCATCCGCAAGTTCCCCCACCGCGACGCCACGctgctgcagcagctggtacGAAGTATCGCTCCCGTGGAGATCGGTAACGATCCTACAGCCATCTCAGTTTTGACCCAGGCTATAACAGGACAGGTGGGCTTCATGGATGCAGAGTTCTGTACCACCTGTGGGGAGAAGGGAGCAGAGAAGAGATGCTCCATCTGTAAAATGGTGATTTACTGTGCCCCAGCCTGCCAGAAAATGCACTGGTTCACCCATAAGAAGGTCTGCAAGCAGCTTCAGGAGCAGAGAGAAAAGCACGAGGCAGAGTCAGCCAAGCTGATGGAGCGACAGAGGAAAGAGCAGAGCCAGGCGGTAGAGTCGGCGACAGGCTCCATGCAGGACCTCTCAGTAGGACCCAATGAAGACTCTCCAACTTCCCCGTCAACCTCTGACAACCAAGcagacccccctccccccagcccTGTCTCCACCACTCCAGCCACAGAGAACTGAAGGAGGTCTGTAAGGGACGTCCAACACAGGTGCACAATGCCTATACACCCTGCTGTCTCCCCTACTACAGGTCTACACTGTTGTCCTAGAAGGTCTAAGGGAGGCCTGCCATGTAAGGCCCAACAGTTAACCTGGGGATGAAGTACGCAGGAGCTTCACACAAGCTTAAGGCCTGAACCCATGGGAAAGGATCCCTTATTTATTGATGATCTGACATTGTTTTCCACCAAAGCAACGCAACACTATTGCACACGatggaataagggttagggtcacgAGTGTCtatgctttttttttattttttattattccaTGTTTTTTTTCATCATTCATGTCCAATGTTAAATTGTACactaatgtttttttttcaagaaTAATGCGAAGTGCTTCAGGGAGTGTTATGTAAAGAAGTAGTCGTAGGTTTAATTGCTTTTCTGTTTGTTCATGTCCttaatttccctagttaatagaTAAAGGACATTGTTTCCAAACATACAGTAAAGTGGCTTGAATTGGCCAAGAACAAAATAATTAAGTGACTGTAACCTCCTGAAAAAGCAATTTGGCAAATCCCTCTAACAATGtggcttttttttgttgttgaatactGATCTTTCGAAGATGTCAAATGACTGTGATTGCAATACAACAGAATAAACACCA
>XM_036973486.1
TATCAATAATTAACTTTCTAAACTTCTGTGGAACTGCTAACAAATGTTGAAAAGGGGGAGGAGAATGGGCTTTGAAAGCGGAAATGTTCAAGAAGCCTCAAGATTATTGGGCTGCAAGGATGTCAGAGTCAACTGTTTGGATGAGAATGGGATGACACCCCTCATGCACGCTGCATACAAGGGCAAGGCGGACATGTGCAAGCTGCTACTGCAACATGGGGCAGATGTGAACTGTAATGAACACGAGCATGGATACACGGCACTGATGTTCGCCGGGCTATCAGGTAAGACTGATATCACCTGGATGATGTTAGATGCAGGAGCGGAGACAGATGTGGTCAACTCCGTCGGGCGAACAGCATCTCAGATGGCTGCGTTTGTCGggcAGCACGACTGTGTGACGGTGATCAACAACTTCTTCTCGCGGGCCAAGCTGGAGTATTACACCAAACGCCAGGGGCTGGAGAAGGAGCCCAAGCTGCCCCCCAAACTGGCAGGGCCCCTCCACAAGATCATCATGAGCACCAACCTCAACCCCGTCAAGATGGTGCTTCTGGTGAAGGAGAACCCGGTGCTGGCCGAGGTGGAGGCCCTGGAGAAGTGCCGGCGGGTGATGGAGCTGATCTGTGAGAAGTGTGTGAAGCAGCAGGACATGAACGAGGTGCTGGCAATGAAGATGCACTACATTAGCTGTGTGCTGCAGAAGTGTGCCTCCTTCCTCAAGGAGCGTGATGACAAGCTGGAAGGACTCATCAAGAGCTTGTTGAAGGGCCGGGACAGTGACGGCTTCCCGCTGTTCCAGGAGAAGTTCATCAGAGAGTGCATCCGCAAGTTCCCCCACCGCGACGCCACGctgctgcagcagctggtacGAAGTATCGCTCCCGTGGAGATCGGTAACGATCCTACAGCCATCTCAGTTTTGACCCAGGCTATAACAGGACAGGTGGGCTTCATGGATGCAGAGTTCTGTACCACCTGTGGGGAGAAGGGAGCAGAGAAGAGATGCTCCATCTGTAAAATGGTGATTTACTGTGCCCCAGCCTGCCAGAAAATGCACTGGTTCACCCATAAGAAGGTCTGCAAGCAGCTTCAGGAGCAGAGAGAAAAGCACGAGGCAGAGTCAGCCAAGCTGATGGAGCGACAGAGGAAAGAGCAGAGCCAGGCGGTAGAGTCGGCGACAGGCTCCATGCAGGACCTCTCAGTAGGACCCAATGAAGACTCTCCAACTTCCCCGTCAACCTCTGACAACCAAGcagacccccctccccccagcccTGTCTCCACCACTCCAGCCACAGAGAACTGAAGGAGGTCTGTAAGGGACGTCCAACACAGGTGCACAATGCCTATACACCCTGCTGTCTCCCCTACTACAGGTCTACACTGTTGTCCTAGAAGGTCTAAGGGAGGCCTGCCATGTAAGGCCCAACAGTTAACCTGGGGATGAAGTACGCAGGAGCTTCACACAAGCTTAAGGCCTGAACCCATGGGAAAGGATCCCTTATTTATTGATGATCTGACATTGTTTTCCACCAAAGCAACGCAACACTATTGCACACGatggaataagggttagggtcacgAGTGTCtatgctttttttttattttttattattccaTGTTTTTTTTCATCATTCATGTCCAATGTTAAATTGTACactaatgtttttttttcaagaaTAATGCGAAGTGCTTCAGGGAGTGTTATGTAAAGAAGTAGTCGTAGGTTTAATTGCTTTTCTGTTTGTTCATGTCCttaatttccctagttaatagaTAAAGGACATTGTTTCCAAACATACAGTAAAGTGGCTTGAATTGGCCAAGAACAAAATAATTAAGTGACTGTAACCTCCTGAAAAAGCAATTTGGCAAATCCCTCTAACAATGtggcttttttttgttgttgaatactGATCTTTCGAAGATGTCAAATGACTGTGATTGCAATACAACAGAATAAACACCA

Function

symbol description
ankmy2 Predicted to enable enzyme binding activity and metal ion binding activity. Predicted to be located in cilium.

NR:

description
ankyrin repeat and MYND domain-containing protein 2-like

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K24633 ANKMY2, ZMYND20, DAF25; ankyrin repeat and MYND domain-containing protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021594678.2 False 2125 mRNA 0.48 10 26396816 26401667
XM_036973486.1 True 1972 mRNA 0.49 10 26396816 26401897

Neighbor

gene id symbol gene type direction distance location
LOC110516015 LOC106582291 coding downstream 4634 26389811 ~ 26392182 (-)
LOC110515999 LOC106582287 coding downstream 9365 26351160 ~ 26387451 (-)
LOC110515986 meox2 coding downstream 65648 26317574 ~ 26331168 (-)
LOC110515972 LOC106582276 coding downstream 80708 26275762 ~ 26316108 (-)
LOC110515948 LOC106582257 coding downstream 143866 26188922 ~ 26252950 (-)
LOC110503977 bag6 coding upstream 6587 26408484 ~ 26424365 (-)
trnaa-ugc-3 NA coding upstream 59952 26461849 ~ 26461922 (-)
LOC110503983 LOC106582320 coding upstream 73201 26475098 ~ 26524060 (-)
LOC110516068 LOC106582335 coding upstream 122482 26524379 ~ 26533272 (-)
mgat1a LOC106582341 coding upstream 131747 26533644 ~ 26536641 (-)
G239939 NA non-coding downstream 25825 26370752 ~ 26370991 (-)
G239904 NA non-coding downstream 76276 26320315 ~ 26320540 (-)
G239864 NA non-coding downstream 187712 26208684 ~ 26209104 (-)
G239853 NA non-coding downstream 209613 26187003 ~ 26187203 (-)
G240348 NA non-coding upstream 13505 26415402 ~ 26443224 (-)
G240371 NA non-coding upstream 64538 26466435 ~ 26466854 (-)
G240384 NA non-coding upstream 71872 26473769 ~ 26474043 (-)
G240402 NA non-coding upstream 137029 26538926 ~ 26539245 (-)
LOC110515750 LOC106582146 other downstream 572059 25822812 ~ 25825108 (-)
LOC110515384 LOC106582009 other downstream 1160449 25171287 ~ 25236536 (-)
LOC110515208 LOC106581894 other downstream 1430608 24936516 ~ 25052970 (-)
LOC110515154 LOC106605289 other downstream 1626493 24767049 ~ 24799511 (-)
G237832 NA other downstream 1875272 24521219 ~ 24521544 (-)
G240409 NA other upstream 167204 26569101 ~ 26569522 (-)
G240464 NA other upstream 272695 26674592 ~ 26675033 (-)
LOC110516631 LOC106582601 other upstream 669158 27070914 ~ 27097259 (-)
LOC110516667 LOC106582624 other upstream 710285 27111084 ~ 27127488 (-)
LOC110516678 LOC106605187 other upstream 753671 27154680 ~ 27159987 (-)

Expression


Co-expression Network