zp3d.2 (LOC106582366)


Basic Information

Item Value
gene id zp3d.2
gene name LOC106582366
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 26605173 ~ 26608086 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021594772.2
TATGAACGCAGTATACCTATGGATATGAATTGACGCAGGGCCTGATTTTGCTCGAGATATTGTACCATTTTGGTACAGGAATATAgatatgttttatattttcaaCTTGGCGTTGTTGTTTCTTTTGCATTCTCTAAGAGCAGAGGGAGGCTCAAATGCACGCCAGTCTTCTGTGAAGGTATTCGCCGAAGACTCACCATCTTACCTCGAACTACCTGTGTTCCAGCACTCAAGGGTGCCGCTGGTAGACAAGGAACATTTCTCTCCAGTCCGTGGAACTGGACACGAACAATTACCGGATAAAGTTAGGAAAATACTGGTCCCGGTGTACCCAACACAGAAGCCCTCTGGTCCAAAAAGTCAAGCCCGCGAAGTGATAACACTTTGTAACATCAACAAGATGTTCGTGCAGGtaaagaaaaacattttgggCACCGGGAGTTCACTGTCTCAACTGACACTCGGAACATGCCATGCCAATAAATCTACAAAAGTTTCCCTCATCTTCGAATACGACCTCGGCCTCTGTGGGAGCAAGCGCTCGCTCCAAGGGCCTATCAGACGAGCTGCACCATTCACCTTGCGAGTTGTCTGTCACTTCAACAGATATCATTACTCCTACAAAATAGGATACATGCTGAACGTGGTACACAAGGTCTCTAAACCAATGAAGAACAGAACCCGTTCCATGCTCACTGCACGTAATGctcaATGGGAGAGACTTGCCCCATCCGATGGGTACTCTATGGGAAAGCCCATGTACTTTCAGGCTGAAGTGCCTTCCATGTCTAAAGATGGACGTCTCTATGTCCACTCATGTAATGTGACCATTAAGCCGTCACACTCCTCAACGCCTCAGTTCACTGTCATTGACAATTTTGGGTGCATGGTTGAGAGCAAAAACAACAGTGGCTCCAGATTCATCCCATCTAAAAGGAATGTTGTGAGGTTTACCATGGATGCCTTTCTGTTTCAGGGAATGACAGCAGGGCAGCTCAAGCCGCCTCTTCAGCCACAGCAGCTCTACATGTACTGTGCTATGTCTGTGGGGAGGTCTGTCCCCTCTTCAACTGCGAAGGCCTGCACTTACGATTCTGCAGCAGGAGGATGGAAGGAGCTGTATGGAGCTTCTTCAGTCTGCTCCTGTTGTGAGTCCACATGTAGCTCTGCTGTCCCCTCTGCCACCACCAAGATGGTCACCAGCAAGTCGTGGTCGGTGGAATACAGCACAAAGCCTGCCCAGGAGTTGACGACTACCTCACAGCCCGAGACCGTTGTGGCGGGGCAGTTCGGTGTGAGGCAGGTGGAGAGACTTAAAGAGAGGCCTGTGAAGGGATTTGCTGTTGTGGAAGTGGAGCAGGTCTCTGAACCACACAGAATATTTGAAGAGTTCTTTGGTGTGGACAAATAGACAGCGAGTGTGGTCACTGCCCGATGTTCATGTCGATAATTCATTTTGGCAATAAAACAAATTACCGATACA
>XM_021594771.2
GAACGCAGTATACCTATGGATATGAATTGACGCAGGGCCTGATTTTGCTCGAGATATTGTACCATTTTGGTACAGGAATATAgatatgttttatattttcaaCTTGGCGTTGTTGTTTCTTTTGCATTCTCTAAGAGCAGAGGGAGGCTCAAATGCACGCCAGTCTTCTGTGAAGGTATTCGCCGAAGACTCACCATCTTACCTCGAACTACCTGTGTTCCAGCACTCAAGGGTGCCGCTGGTAGACAAGGAACATTTCTCTCCAGTCCGTGGAACTGGACACGAACAATTACCGGATAAAGTTAGGAAAATACTGGTCCCGGTGTACCCAACACAGAAGCCCTCTGGTCCAAAAAGTCAAGCCCGCGAAGTGATAACACTTTGTAACATCAACAAGATGTTCGTGCAGGtaaagaaaaacattttgggCACCGGGAGTTCACTGTCTCAACTGACACTCGGAACATGCCATGCCAATAAATCTACAAAAGTTTCCCTCATCTTCGAATACGACCTCGGCCTCTGTGGGAGCAAGCGCTCGTTAGTAAATAATCGTGTGGCCTACTCCAACACTCTCCGATATGATCCCCCGAAGCTCCAAGGGCCTATCAGACGAGCTGCACCATTCACCTTGCGAGTTGTCTGTCACTTCAACAGATATCATTACTCCTACAAAATAGGATACATGCTGAACGTGGTACACAAGGTCTCTAAACCAATGAAGAACAGAACCCGTTCCATGCTCACTGCACGTAATGctcaATGGGAGAGACTTGCCCCATCCGATGGGTACTCTATGGGAAAGCCCATGTACTTTCAGGCTGAAGTGCCTTCCATGTCTAAAGATGGACGTCTCTATGTCCACTCATGTAATGTGACCATTAAGCCGTCACACTCCTCAACGCCTCAGTTCACTGTCATTGACAATTTTGGGTGCATGGTTGAGAGCAAAAACAACAGTGGCTCCAGATTCATCCCATCTAAAAGGAATGTTGTGAGGTTTACCATGGATGCCTTTCTGTTTCAGGGAATGACAGCAGGGCAGCTCAAGCCGCCTCTTCAGCCACAGCAGCTCTACATGTACTGTGCTATGTCTGTGGGGAGGTCTGTCCCCTCTTCAACTGCGAAGGCCTGCACTTACGATTCTGCAGCAGGAGGATGGAAGGAGCTGTATGGAGCTTCTTCAGTCTGCTCCTGTTGTGAGTCCACATGTAGCTCTGCTGTCCCCTCTGCCACCACCAAGATGGTCACCAGCAAGTCGTGGTCGGTGGAATACAGCACAAAGCCTGCCCAGGAGTTGACGACTACCTCACAGCCCGAGACCGTTGTGGCGGGGCAGTTCGGTGTGAGGCAGGTGGAGAGACTTAAAGAGAGGCCTGTGAAGGGATTTGCTGTTGTGGAAGTGGAGCAGGTCTCTGAACCACACAGAATATTTGAAGAGTTCTTTGGTGTGGACAAATAGACAGCGAGTGTGGTCACTGCCCGATGTTCATGTCGATAATTCATTTTGGCAATAAAACAAATTACCGATACA

Function

NR:

description
zona pellucida sperm-binding protein 3-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021594772.2 False 1483 mRNA 0.48 8 26605173 26608086
XM_021594771.2 True 1534 mRNA 0.48 8 26605176 26608086

Neighbor

gene id symbol gene type direction distance location
ccdc105 ccdc105 coding upstream 4333 26597478 ~ 26600840 (+)
LOC110516161 LOC106582353 coding upstream 8052 26574152 ~ 26597121 (+)
LOC110516147 ppt2a coding upstream 31473 26567609 ~ 26573700 (+)
tnf tnf coding upstream 132310 26470473 ~ 26472863 (+)
LOC100136321 LOC100136321 coding upstream 143079 26447862 ~ 26462094 (+)
LOC110516250 LOC106605227 coding downstream 14575 26622661 ~ 26628082 (+)
LOC110516260 LOC106582385 coding downstream 20154 26628240 ~ 26630086 (+)
LOC110503991 NA coding downstream 26221 26634307 ~ 26636638 (+)
LOC110503999 LOC106582397 coding downstream 46802 26654888 ~ 26690523 (+)
LOC110516307 psmc4 coding downstream 144751 26752837 ~ 26763638 (+)
G240052 NA non-coding upstream 57354 26547238 ~ 26547819 (+)
G240043 LOC106582341 non-coding upstream 70215 26533660 ~ 26534958 (+)
G240010 NA non-coding upstream 117425 26485679 ~ 26487748 (+)
G240009 LOC106605218 non-coding upstream 120353 26479206 ~ 26484820 (+)
G240065 fli1 non-coding downstream 3051 26611137 ~ 26622407 (+)
G240080 NA non-coding downstream 56364 26664450 ~ 26664817 (+)
G240082 NA non-coding downstream 58725 26666811 ~ 26667027 (+)
G240094 LOC106605233 non-coding downstream 90128 26698214 ~ 26698450 (+)
G240095 NA non-coding downstream 91147 26699233 ~ 26699537 (+)
G239752 meox2 other upstream 276842 26327408 ~ 26328331 (+)
G239697 LOC106582257 other upstream 384990 26213642 ~ 26220183 (+)
G239026 NA other upstream 1063560 25540769 ~ 25541613 (+)
G238540 LOC106582009 other upstream 1405939 25195287 ~ 25199234 (+)
G238050 NA other upstream 1829228 24775279 ~ 24775945 (+)
G240244 NA other downstream 443100 27051186 ~ 27051954 (+)
LOC110516767 LOC106605158 other downstream 648502 27240708 ~ 27264405 (+)
G241150 LOC106582751 other downstream 948086 27556172 ~ 27558532 (+)
LOC110516984 NA other downstream 1106957 27705985 ~ 27723794 (+)
LOC110516993 LOC106605183 other downstream 1139261 27725189 ~ 27749972 (+)

Expression

zp3d.2(LOC106582366) Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 100.
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zp3d.2(LOC106582366) Expression in each Bioproject

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zp3d.2(LOC106582366) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
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Co-expression Network