Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110516260 |
| gene name | LOC106582385 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 26628240 ~ 26630086 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| apoptosis-associated speck-like protein containing a CARD |
| id | description |
|---|---|
| K12799 | PYCARD, ASC; apoptosis-associated speck-like protein containing a CARD |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021594781.2 | True | 885 | mRNA | 0.45 | 3 | 26628240 | 26630086 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110516250 | LOC106605227 | coding | upstream | 158 | 26622661 ~ 26628082 (+) |
| zp3d.2 | LOC106582366 | coding | upstream | 20154 | 26605173 ~ 26608086 (+) |
| ccdc105 | ccdc105 | coding | upstream | 27400 | 26597478 ~ 26600840 (+) |
| LOC110516161 | LOC106582353 | coding | upstream | 31119 | 26574152 ~ 26597121 (+) |
| LOC110516147 | ppt2a | coding | upstream | 54540 | 26567609 ~ 26573700 (+) |
| LOC110503991 | NA | coding | downstream | 4221 | 26634307 ~ 26636638 (+) |
| LOC110503999 | LOC106582397 | coding | downstream | 24802 | 26654888 ~ 26690523 (+) |
| LOC110516307 | psmc4 | coding | downstream | 122751 | 26752837 ~ 26763638 (+) |
| LOC110516329 | LOC106582539 | coding | downstream | 139062 | 26769148 ~ 26797346 (+) |
| LOC110516464 | lsr | coding | downstream | 236324 | 26866410 ~ 26890388 (+) |
| G240065 | fli1 | non-coding | upstream | 5833 | 26611137 ~ 26622407 (+) |
| G240052 | NA | non-coding | upstream | 80421 | 26547238 ~ 26547819 (+) |
| G240043 | LOC106582341 | non-coding | upstream | 93282 | 26533660 ~ 26534958 (+) |
| G240010 | NA | non-coding | upstream | 140492 | 26485679 ~ 26487748 (+) |
| G240009 | LOC106605218 | non-coding | upstream | 143420 | 26479206 ~ 26484820 (+) |
| G240080 | NA | non-coding | downstream | 34364 | 26664450 ~ 26664817 (+) |
| G240082 | NA | non-coding | downstream | 36725 | 26666811 ~ 26667027 (+) |
| G240094 | LOC106605233 | non-coding | downstream | 68128 | 26698214 ~ 26698450 (+) |
| G240095 | NA | non-coding | downstream | 69147 | 26699233 ~ 26699537 (+) |
| G240097 | NA | non-coding | downstream | 72069 | 26702155 ~ 26702405 (+) |
| G239752 | meox2 | other | upstream | 299909 | 26327408 ~ 26328331 (+) |
| G239697 | LOC106582257 | other | upstream | 408057 | 26213642 ~ 26220183 (+) |
| G239026 | NA | other | upstream | 1086627 | 25540769 ~ 25541613 (+) |
| G238540 | LOC106582009 | other | upstream | 1429006 | 25195287 ~ 25199234 (+) |
| G238050 | NA | other | upstream | 1852295 | 24775279 ~ 24775945 (+) |
| G240244 | NA | other | downstream | 421100 | 27051186 ~ 27051954 (+) |
| LOC110516767 | LOC106605158 | other | downstream | 626502 | 27240708 ~ 27264405 (+) |
| G241150 | LOC106582751 | other | downstream | 926086 | 27556172 ~ 27558532 (+) |
| LOC110516984 | NA | other | downstream | 1084957 | 27705985 ~ 27723794 (+) |
| LOC110516993 | LOC106605183 | other | downstream | 1117261 | 27725189 ~ 27749972 (+) |
