Item | Value |
---|---|
gene id | LOC110503999 |
gene name | LOC106582397 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048567.1 |
NCBI id | CM023221.2 |
chromosome length | 85311031 |
location | 26654888 ~ 26690523 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
GRAM domain-containing protein 1A-like isoform X2 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036973624.1 | False | 5627 | mRNA | 0.50 | 20 | 26654888 | 26690523 |
XM_036973598.1 | False | 6793 | mRNA | 0.50 | 20 | 26656537 | 26690523 |
XM_036973605.1 | False | 6781 | mRNA | 0.50 | 19 | 26656537 | 26690523 |
XM_036973615.1 | True | 5102 | mRNA | 0.52 | 20 | 26663077 | 26690523 |
26,636,000
26,640,000
26,644,000
26,648,000
26,652,000
26,656,000
26,660,000
26,664,000
26,668,000
26,672,000
26,676,000
26,680,000
26,684,000
26,688,000
26,692,000
26,696,000
26,700,000
26,704,000
26,708,000
26,712,000
NC_048567.1
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gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110503991 | NA | coding | upstream | 18250 | 26634307 ~ 26636638 (+) |
LOC110516260 | LOC106582385 | coding | upstream | 24802 | 26628240 ~ 26630086 (+) |
LOC110516250 | LOC106605227 | coding | upstream | 26806 | 26622661 ~ 26628082 (+) |
zp3d.2 | LOC106582366 | coding | upstream | 46802 | 26605173 ~ 26608086 (+) |
ccdc105 | ccdc105 | coding | upstream | 54048 | 26597478 ~ 26600840 (+) |
LOC110516307 | psmc4 | coding | downstream | 62314 | 26752837 ~ 26763638 (+) |
LOC110516329 | LOC106582539 | coding | downstream | 78625 | 26769148 ~ 26797346 (+) |
LOC110516464 | lsr | coding | downstream | 175887 | 26866410 ~ 26890388 (+) |
LOC110516373 | LOC106582469 | coding | downstream | 206086 | 26896609 ~ 26914563 (+) |
LOC118936488 | LOC106582510 | coding | downstream | 248282 | 26938805 ~ 26948749 (+) |
G240065 | fli1 | non-coding | upstream | 32481 | 26611137 ~ 26622407 (+) |
G240052 | NA | non-coding | upstream | 107069 | 26547238 ~ 26547819 (+) |
G240043 | LOC106582341 | non-coding | upstream | 119930 | 26533660 ~ 26534958 (+) |
G240010 | NA | non-coding | upstream | 167140 | 26485679 ~ 26487748 (+) |
G240009 | LOC106605218 | non-coding | upstream | 170068 | 26479206 ~ 26484820 (+) |
G240094 | LOC106605233 | non-coding | downstream | 7691 | 26698214 ~ 26698450 (+) |
G240095 | NA | non-coding | downstream | 8710 | 26699233 ~ 26699537 (+) |
G240097 | NA | non-coding | downstream | 11632 | 26702155 ~ 26702405 (+) |
G240098 | NA | non-coding | downstream | 12223 | 26702746 ~ 26703096 (+) |
G240102 | NA | non-coding | downstream | 20480 | 26711003 ~ 26712290 (+) |
G239752 | meox2 | other | upstream | 326557 | 26327408 ~ 26328331 (+) |
G239697 | LOC106582257 | other | upstream | 434705 | 26213642 ~ 26220183 (+) |
G239026 | NA | other | upstream | 1113275 | 25540769 ~ 25541613 (+) |
G238540 | LOC106582009 | other | upstream | 1455654 | 25195287 ~ 25199234 (+) |
G238050 | NA | other | upstream | 1878943 | 24775279 ~ 24775945 (+) |
G240244 | NA | other | downstream | 360663 | 27051186 ~ 27051954 (+) |
LOC110516767 | LOC106605158 | other | downstream | 566065 | 27240708 ~ 27264405 (+) |
G241150 | LOC106582751 | other | downstream | 865649 | 27556172 ~ 27558532 (+) |
LOC110516984 | NA | other | downstream | 1024520 | 27705985 ~ 27723794 (+) |
LOC110516993 | LOC106605183 | other | downstream | 1056824 | 27725189 ~ 27749972 (+) |