LOC110505184 (LOC106582443)


Basic Information

Item Value
gene id LOC110505184
gene name LOC106582443
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 26729074 ~ 26736469 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021584224.2
caggaaattATCATTTTCAGCACAGCTTGTATTATCACTTTCGTCTCTTGCTGATAAAAGTCTAATCAGATAATTATTGTGGTTAAAAGGAAGATGGCAAAAGTTTTGATGACTTCAAATTCAAAGAGAGATTTGTGGAACATTCTAAGTATTGCCCTCATCACTGCAGGAGCCTGGGCCCAGACAGTTACCCAGAAACCTGATGAGGTTGTGTATAAACTGGCTCAGAATGCCTCAATGGACTGCCAGTTCATCCACACTCCAGACCAGCAGGTGGCAAAGAATCCCATTCTCTACTGGCATAAAATTACAAATTTGACCCAAATGACAAGACTGTGGCCTGACCCAGAGTCACCGTACAAGGATCGTGTGGAGGTTCTGGACAGCGACCGCAACTCACCGAACAGATCTGTACTTCTGAAGAATGTCCAGTGGGAGGATAGCAGTGGAAAGTATGAGTGTAAACTGTCTTATAGGGCCGCCAAACAAGATAAGAGGACGAAAGGGAGCGGCGTTAAGCTGTTGATACATGATTCGATGTTCTTTGGGCTTGACCCTGAGAATGAGACCCAACTCATGTGTGCTGTGAATGTTTCCCGGGATGATGGGTTTTTCTTATCCTTGCTACAAGACGGATCTAAAGTATTCCAAAAGACCATTGATCCTCTTCACCCCAGCATGTCACTGTATGTTACCCTGTCTGTGATCCTCCCCTTGGAGAAGGGAAAGAATTATGAGTGTCAAATCCACCTGAGCTCCACCATGATAATGAGCCAGCCCTTCAAACAGCCGCTTGAGACGCCAGCAGTAGAGAAGGTGCTTCCTGAACCAGTTTTCTTGTTCGTGGCCATCCTCCTGGTCCCCATCACCGTGCTTCTGACTCTGCTCACAGCCCTTCTTGTTCTAAGCAGATAAGACAGGAGATAGTAAGACTGACAATGccagatatacagtgcattcagaacgtTTTgtatttgatttcacctttatttaaccaggtaggctagttgagaacaagttctcatttgcaactgtgacctggccaagataaagcctagcaattcgacacataaaaacaacagagttacgcatggaacaaacaaaacatacagtaaataataca

Function

NR:

description
uncharacterized protein LOC110505184

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021584224.2 True 1123 mRNA 0.44 4 26729074 26736469

Neighbor

gene id symbol gene type direction distance location
LOC110516285 LOC106582421 coding downstream 13610 26691738 ~ 26715464 (-)
LOC110516273 NA coding downstream 79084 26647025 ~ 26649990 (-)
LOC110505173 NA coding downstream 91925 26636727 ~ 26637149 (-)
LOC110516190 fli1 coding downstream 107276 26608152 ~ 26621798 (-)
dhx16 LOC106582345 coding downstream 161444 26548090 ~ 26567630 (-)
LOC110516341 LOC106582531 coding upstream 75997 26812466 ~ 26817929 (-)
LOC110516351 LOC106605237 coding upstream 94707 26831176 ~ 26881042 (-)
LOC110516494 NA coding upstream 196909 26933378 ~ 26939575 (-)
LOC110516475 NA coding upstream 233929 26928593 ~ 26978577 (-)
LOC110516606 LOC106605168 coding upstream 313523 27049992 ~ 27064472 (-)
G240472 NA non-coding downstream 29469 26699281 ~ 26699605 (-)
G240463 NA non-coding downstream 58173 26670628 ~ 26670901 (-)
G240458 NA non-coding downstream 61745 26667059 ~ 26667329 (-)
G240456 LOC106582397 non-coding downstream 65007 26662995 ~ 26664067 (-)
G240438 NA non-coding downstream 69726 26659071 ~ 26659348 (-)
G240497 NA non-coding upstream 26244 26762713 ~ 26763620 (-)
G240519 NA non-coding upstream 48956 26785425 ~ 26828419 (-)
G240574 NA non-coding upstream 120600 26857069 ~ 26857277 (-)
G240579 NA non-coding upstream 125293 26861762 ~ 26861967 (-)
G240588 NA non-coding upstream 137656 26874125 ~ 26874648 (-)
G240464 NA other downstream 54041 26674592 ~ 26675033 (-)
G240409 NA other downstream 159552 26569101 ~ 26569522 (-)
LOC110515750 LOC106582146 other downstream 904317 25822812 ~ 25825108 (-)
LOC110515384 LOC106582009 other downstream 1492707 25171287 ~ 25236536 (-)
LOC110515208 LOC106581894 other downstream 1762866 24936516 ~ 25052970 (-)
LOC110516631 LOC106582601 other upstream 334586 27070914 ~ 27097259 (-)
LOC110516667 LOC106582624 other upstream 375713 27111084 ~ 27127488 (-)
LOC110516678 LOC106605187 other upstream 419099 27154680 ~ 27159987 (-)
G240906 NA other upstream 448191 27184660 ~ 27185105 (-)
G242021 LOC106582922 other upstream 1518688 28205275 ~ 28256509 (-)

Expression


Co-expression Network