Item | Value |
---|---|
gene id | LOC110516537 |
gene name | LOC106582465 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048567.1 |
NCBI id | CM023221.2 |
chromosome length | 85311031 |
location | 27004845 ~ 27011081 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
sialic acid-binding Ig-like lectin 7 isoform X1 |
id | description |
---|---|
K24329 | SIGLEC14; sialic acid binding Ig-like lectin 14 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021594949.2 | False | 2805 | mRNA | 0.46 | 10 | 27004845 | 27011081 |
XM_036973691.1 | False | 3193 | mRNA | 0.46 | 10 | 27004845 | 27011081 |
XM_021594943.2 | False | 2709 | mRNA | 0.45 | 9 | 27004846 | 27011081 |
XM_021594967.2 | False | 2699 | mRNA | 0.45 | 9 | 27004847 | 27011081 |
XM_021594971.2 | False | 2418 | mRNA | 0.46 | 9 | 27004852 | 27011081 |
XM_021594977.2 | False | 2406 | mRNA | 0.46 | 9 | 27004855 | 27011081 |
XM_021594983.2 | False | 2303 | mRNA | 0.46 | 8 | 27004874 | 27011081 |
XM_021594955.2 | True | 2427 | mRNA | 0.45 | 8 | 27007483 | 27011081 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110516512 | LOC106582493 | coding | upstream | 10529 | 26981634 ~ 26994316 (+) |
LOC118936488 | LOC106582510 | coding | upstream | 56096 | 26938805 ~ 26948749 (+) |
LOC110516373 | LOC106582469 | coding | upstream | 90282 | 26896609 ~ 26914563 (+) |
LOC110516464 | lsr | coding | upstream | 114457 | 26866410 ~ 26890388 (+) |
LOC110516329 | LOC106582539 | coding | upstream | 207499 | 26769148 ~ 26797346 (+) |
irgq2 | LOC106582554 | coding | downstream | 1896 | 27012977 ~ 27014227 (+) |
si:dkey-24p1.1 | LOC106582456 | coding | downstream | 5377 | 27016458 ~ 27048676 (+) |
LOC110505196 | NA | coding | downstream | 172702 | 27183783 ~ 27185128 (+) |
LOC110516690 | LOC106584585 | coding | downstream | 174301 | 27185382 ~ 27195271 (+) |
LOC110504003 | LOC106605005 | coding | downstream | 186788 | 27197869 ~ 27200027 (+) |
G240208 | LOC100194703 | non-coding | upstream | 125786 | 26878814 ~ 26879059 (+) |
G240206 | NA | non-coding | upstream | 127956 | 26876434 ~ 26876889 (+) |
G240181 | NA | non-coding | upstream | 165668 | 26838250 ~ 26839177 (+) |
G240242 | NA | non-coding | downstream | 39023 | 27050104 ~ 27050575 (+) |
G240272 | NA | non-coding | downstream | 65784 | 27076865 ~ 27077077 (+) |
G240304 | NA | non-coding | downstream | 118938 | 27130019 ~ 27132621 (+) |
G240316 | NA | non-coding | downstream | 131389 | 27142470 ~ 27143522 (+) |
G240324 | NA | non-coding | downstream | 143605 | 27154686 ~ 27155500 (+) |
G239752 | meox2 | other | upstream | 676514 | 26327408 ~ 26328331 (+) |
G239697 | LOC106582257 | other | upstream | 784662 | 26213642 ~ 26220183 (+) |
G239026 | NA | other | upstream | 1463232 | 25540769 ~ 25541613 (+) |
G238540 | LOC106582009 | other | upstream | 1805611 | 25195287 ~ 25199234 (+) |
G238050 | NA | other | upstream | 2228900 | 24775279 ~ 24775945 (+) |
G240244 | NA | other | downstream | 40105 | 27051186 ~ 27051954 (+) |
LOC110516767 | LOC106605158 | other | downstream | 245507 | 27240708 ~ 27264405 (+) |
G241150 | LOC106582751 | other | downstream | 545091 | 27556172 ~ 27558532 (+) |
LOC110516984 | NA | other | downstream | 703962 | 27705985 ~ 27723794 (+) |
LOC110516993 | LOC106605183 | other | downstream | 736266 | 27725189 ~ 27749972 (+) |