Item | Value |
---|---|
gene id | LOC110516735 |
gene name | LOC106582654 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048567.1 |
NCBI id | CM023221.2 |
chromosome length | 85311031 |
location | 27212189 ~ 27228503 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
myelin-associated glycoprotein-like isoform X1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036973715.1 | False | 2812 | mRNA | 0.51 | 9 | 27212189 | 27217527 |
XM_036973719.1 | False | 2545 | mRNA | 0.52 | 10 | 27212189 | 27217527 |
XM_021595089.2 | False | 2861 | mRNA | 0.52 | 11 | 27212189 | 27217984 |
XM_036973718.1 | False | 3850 | mRNA | 0.50 | 11 | 27212189 | 27222555 |
XM_036973716.1 | False | 3432 | mRNA | 0.52 | 14 | 27212189 | 27228503 |
XM_036973717.1 | False | 3882 | mRNA | 0.51 | 14 | 27212189 | 27228503 |
TU275313 | True | 272 | lncRNA | 0.53 | 1 | 27214903 | 27215174 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
lim2.5 | LOC106605161 | coding | downstream | 419 | 27206115 ~ 27211770 (-) |
LOC110516678 | LOC106605187 | coding | downstream | 52202 | 27154680 ~ 27159987 (-) |
LOC110516655 | LOC106582635 | coding | downstream | 60531 | 27128099 ~ 27151658 (-) |
LOC110516667 | LOC106582624 | coding | downstream | 84701 | 27111084 ~ 27127488 (-) |
LOC110516644 | LOC106582613 | coding | downstream | 109135 | 27098540 ~ 27103054 (-) |
LOC110516750 | LOC106582677 | coding | upstream | 1132 | 27229635 ~ 27233978 (-) |
LOC110516838 | LOC106582709 | coding | upstream | 295764 | 27524267 ~ 27526325 (-) |
LOC110516862 | LOC106582717 | coding | upstream | 314061 | 27542564 ~ 27549343 (-) |
LOC110516872 | LOC106582751 | coding | upstream | 325526 | 27554029 ~ 27564456 (-) |
LOC118944661 | NA | coding | upstream | 364566 | 27593069 ~ 27609600 (-) |
G240696 | NA | non-coding | downstream | 45908 | 27165801 ~ 27166281 (-) |
G240695 | NA | non-coding | downstream | 46631 | 27165108 ~ 27165558 (-) |
G240694 | NA | non-coding | downstream | 47389 | 27164489 ~ 27164800 (-) |
G240691 | NA | non-coding | downstream | 48793 | 27163187 ~ 27163396 (-) |
G240690 | LOC106605163 | non-coding | downstream | 49335 | 27162521 ~ 27162854 (-) |
G240951 | LOC106584591 | non-coding | upstream | 48702 | 27277205 ~ 27286809 (-) |
G240960 | NA | non-coding | upstream | 60792 | 27289295 ~ 27289513 (-) |
G240966 | NA | non-coding | upstream | 71440 | 27299943 ~ 27300330 (-) |
G241015 | NA | non-coding | upstream | 148979 | 27377482 ~ 27472982 (-) |
G241050 | NA | non-coding | upstream | 195767 | 27424270 ~ 27424578 (-) |
G240906 | NA | other | downstream | 27084 | 27184660 ~ 27185105 (-) |
LOC110516631 | LOC106582601 | other | downstream | 127129 | 27070914 ~ 27097259 (-) |
G240464 | NA | other | downstream | 537156 | 26674592 ~ 26675033 (-) |
G242021 | LOC106582922 | other | upstream | 1026654 | 28205275 ~ 28256509 (-) |
LOC110517114 | pnrc2 | other | upstream | 1047269 | 28275767 ~ 28280077 (-) |
LOC110517222 | NA | other | upstream | 1490951 | 28719454 ~ 28725294 (-) |
G242539 | LOC106582989 | other | upstream | 1498467 | 28726970 ~ 28730375 (-) |
LOC110517244 | LOC106582991 | other | upstream | 1553097 | 28781383 ~ 28786278 (-) |