LOC110516838 (LOC106582709)


Basic Information

Item Value
gene id LOC110516838
gene name LOC106582709
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 27524267 ~ 27526325 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021595167.2
ACGGATGTTGTTTCAATTACACCCTCCACTTGGCAAACTTAAAAGGGGTGAGTAGTGAGTAACAAAAAGCCGTAAGAAACCGTAATGTAGCATGTTGTAATCTCTTTCTATCCTCTCTTGCCATCAGAGTCTTGGAGCCCTTGAAGAGACGATGAGTTGGTTTATTGTCAGAGACAGGAAAACCACGCTGTCTACCCGGGTTTGTTCCAGGCTGTTGACCCAATAAGCAGCCTTCGCCTCTGAAGCCTCAGACTGTCTGACAGATCAAGCCCCTTGCGCTGCAACGTTTTCATCCCCCCCAGACTGCACTGAGATGATGTGACAGATCTTGCTCCCTGTGCCTTCCAGTAACTGTACCCACCGCCGAGGCCACCATGCAGGAGTGCCATACTgcgttgtgtctgtctgtctaccttgTCACCTTTTTGACGGGCTTCCCAGCCAATGCTGTGGCCTTCTACACCTTCAGCAAGAAGGTAAGGCAAAAACCCACGCCCATCGACATCCTGCTCCTCAACCTGACCATCTCGGACCTCCTCTTCCTGCTCTTCCTGCCCTTCAAGATGCAGGAAGTCACGAACGATATGACCTGGAGTCTACCCTACATCCTCTGTCCTTTATCTGGCTTCTTCTTCTACATGACTATCTACGTCAGCACCTTATTCCTGACAGCGGTCAGTGTGGAGCGCTACCTGGGCGTGGCCTTCCCCATCCAACACTCGCTGAAGCGCCGGCCCCTGTATGCCGTGgtggccagtgtatttatctggGTCTTCTCCGTCCTCCACCTGAGCATCGTCGTCATCATGCCCTACTACAACCCACCGCAAGACTCCCTCAGTTCCACAACCAACTCTTCCAACAGCTATGAATTCTCCAACGTCTCCATTGCGCCTCTTAGTGACGTCAACAACATTGCGTCTTCCAGGAATGTTTGCTATGAGGACTTCAGCGAGAAGCAACTGGCGATCCTCCTGCCTGTGCGTCTGGAGCTCTGCCTGGTTCTATTCTGTGTACCTTTCCTCATCTGCAGCTTCTGCTACATCAACTTCATCCGCATACTCTCCGGCCTGCCCCACATCGGGCGTCGCAGACGCCTCCGTGCTATCGGCCTGGCTCTGGGGACACTGCTGGTGTTTGCCTTCTGCTTCGGCCCCTACAACGTCTCCCACATTGTGGGCTTTATAACCAGGAAGAACCCCGACTGGAGGGACATGGCCTTGCTCTGCAGCACCTTCAACGCCTGCTTGGACCCCTTCATCTTCTACTTCTCCTCCTCAGCTGTCAGAGGGACCCTAGGGAGTATGTTGCAGGGGGCCAGAATCAGGCTGGCCAAGTGTATGTTCTGTGGCTGTCACATCCACTGGTCCCCTTGGAATGGAACGAGCGAGCCTCAGAAAGATAAGGGACCCAAACAAGTAGAGATGAATGCTATCTGAAGTTAATTGAATAAGGCCTGTATTAACTGAAATGAGATGTTGTGCTCCTCATGTCTAGTGGCAGGATATGAGTGCTCTGATGTTTATGTTTTCACATTttactgtatctgtgtctctgtttgATCATTGGCGGGCAAACTTCCTACTTAGAGTAGAGATAGGATATGGTAGACACGGAGCCTGCCTTCCTCCTGAGAGACACAAAACAAGGGCTCACATTAGGGAGTTACTGCCTAGCTGCAGTTAGCTGGAATCAAGTACAGTCATTGCCAATTATGTATTATAAGTACACACCTACTGTGACAGTGCGTGAAATAAGTTTGAGAATACATTTGTTCTATTGGGTTGCCTGACAAGATTGGCAAACAGAACAGAAAATGATCATTGATTATAATTGTATTTCACAAGGTTGAAGCCCATTTACACAACTAGGAGCGGTTATGGTGAACTGTAGAGAACAACAGCTCTAACATCTGAGAGACACATCAGAACAACATCTCTCAGCACTGACGGATAAGCACCTCAAACAAGTATCACAGTCGTATCGCTGAAAAGGAAACAATGTTGAAAAGGAACAATGAATTTGAGCACTGAGcagagttggtgtgtgtgtgtgtgtg

Function

NR:

description
free fatty acid receptor 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021595167.2 True 2059 mRNA 0.49 1 27524267 27526325

Neighbor

gene id symbol gene type direction distance location
LOC110516750 LOC106582677 coding downstream 290289 27229635 ~ 27233978 (-)
LOC110516735 LOC106582654 coding downstream 295764 27212189 ~ 27228503 (-)
lim2.5 LOC106605161 coding downstream 312497 27206115 ~ 27211770 (-)
LOC110516678 LOC106605187 coding downstream 364280 27154680 ~ 27159987 (-)
LOC110516655 LOC106582635 coding downstream 372609 27128099 ~ 27151658 (-)
LOC110516862 LOC106582717 coding upstream 16239 27542564 ~ 27549343 (-)
LOC110516872 LOC106582751 coding upstream 27704 27554029 ~ 27564456 (-)
LOC118944661 NA coding upstream 66744 27593069 ~ 27609600 (-)
LOC110516971 LOC106582842 coding upstream 84760 27611085 ~ 27658858 (-)
ago1 LOC106582818 coding upstream 132818 27659143 ~ 27682917 (-)
G241122 NA non-coding downstream 340 27523700 ~ 27523927 (-)
G241101 NA non-coding downstream 6412 27517605 ~ 27517855 (-)
G241100 NA non-coding downstream 7224 27510628 ~ 27517043 (-)
G241015 NA non-coding downstream 51285 27377482 ~ 27472982 (-)
G241050 NA non-coding downstream 99689 27424270 ~ 27424578 (-)
G241126 NA non-coding upstream 1340 27527665 ~ 27527964 (-)
G241135 NA non-coding upstream 14038 27540363 ~ 27540616 (-)
G241311 NA non-coding upstream 14814 27541139 ~ 27541481 (-)
G241316 NA non-coding upstream 25036 27551361 ~ 27551675 (-)
G241317 NA non-coding upstream 25728 27552053 ~ 27552333 (-)
G240906 NA other downstream 339162 27184660 ~ 27185105 (-)
LOC110516667 LOC106582624 other downstream 411645 27111084 ~ 27127488 (-)
LOC110516631 LOC106582601 other downstream 439207 27070914 ~ 27097259 (-)
G240464 NA other downstream 849234 26674592 ~ 26675033 (-)
G242021 LOC106582922 other upstream 728832 28205275 ~ 28256509 (-)
LOC110517114 pnrc2 other upstream 749447 28275767 ~ 28280077 (-)
LOC110517222 NA other upstream 1193129 28719454 ~ 28725294 (-)
G242539 LOC106582989 other upstream 1200645 28726970 ~ 28730375 (-)
LOC110517244 LOC106582991 other upstream 1255275 28781383 ~ 28786278 (-)

Expression


Co-expression Network