dnali1 (dnali1)


Basic Information

Item Value
gene id dnali1
gene name dnali1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 29034928 ~ 29039438 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021595420.2
TATGGACTAGTTCACTTTAGTTCCGTTGTAATATTGCAGACATATTCTATCATCTTTTCAATAAGGTCATACACCTACACAATGTTATACTGAAATGTATGTACTTAATTTTCCTTCCCCATTTCATAGCGTCAAGTTTGAAACAACTCCGAATCATGCCTTCGAGCAGCTCGGATAGGTTAGTGAGTAGCGCATGGAATTAAGTTGCCATGgtaaaaataaacaattaaacGTCTTCAATTCACATTTCAACAACACACATTCCTTGAGACGTTACCTGCTACAACAAAACACTTTATGTGTAGTGTAATCAAAGTATCACAATGATTCCTCCGGCTGATTCTCTGCTGAAATATGACAACCCAGTCTTGGTGAGCAGAAACACAGAAAAGAAGTCTCCAAAGGCCCGACCCCTGAAAGTGGCTCCACAACAGCCTGCCATGACTGGCCCTGTGCCACCTCCACCCAAACCCAAGACCCCCTCAGCCGATACCAACAAACAGCAAACCGAGGAGATCCTCAATGCCATCCTACCACCCAGGGAATGGATGGAGACCAACCAGCTGTGGGTGCAGCAGGTGTCCAGCACGCCGTGTACCCGCATGGACGTGGTGCACCTACAGGAGCAGCTGGATCTGAAGCTGCAGcagagacaggccagggagacggGCATCTGCCCAGTCCGCAGGGAGCTCTACTCCCAGTGCTTcgATGAGTTGATCAGACAGGTAACCATCAACTGTGCTGAGAGAGGACTGCTGTTGTTGCGTGTGCGAGACGAAATCCGTATGACCATTGCTGCTTACCAGACACTGTACGAGAGCAGTGTGGCCTTTGGCATGAGAAAAGCCCTGCAGGCTGAGCAGGGCAAGTCTGACATGGAGAAGAGGATCTCCGATTTGGAGAACGAGAAGCGGGACCTGGAGAGACAGGTTAATGAGCAGAAGGCCAAGTGTGAGGCCATTGagaagagggagactgagagacgGCAGGTAGAGGAGAAGAAACACACAGAGGAGATTCAGTTCCTGAAGAGAACCAACCAGCAGCTCAAGGCCCAGCTGGAGGGGATCATTGCCCCAAAAAAGTGACTCCTCCACTCCACAACTGATCTATATCCAGCAGATTTCAGATGGTCCAACACAGCATTATGTAATAGAAGTCTACTTCATAACCATAAAGCATTGCATTACTATagcagaataaaataaaaaaatg

Function

symbol description
dnali1 Predicted to enable dynein heavy chain binding activity. Predicted to be active in axoneme and filopodium. Orthologous to human DNALI1 (dynein axonemal light intermediate chain 1).

NR:

description
PREDICTED: axonemal dynein light intermediate polypeptide 1

GO: NA

KEGG:

id description
K10410 DNALI; dynein light intermediate chain, axonemal

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021595420.2 True 1218 mRNA 0.48 6 29034928 29039438

Neighbor

gene id symbol gene type direction distance location
rspo1 LOC106605132 coding downstream 113404 28891420 ~ 28921524 (-)
LOC110517244 LOC106582991 coding downstream 248650 28781383 ~ 28786278 (-)
LOC110517222 NA coding downstream 309634 28719454 ~ 28725294 (-)
LOC110517198 LOC106582967 coding downstream 681266 28343744 ~ 28353662 (-)
LOC110517114 pnrc2 coding downstream 754851 28275767 ~ 28280077 (-)
LOC110517348 LOC106604987 coding upstream 156708 29196146 ~ 29201564 (-)
LOC110517416 LOC106605123 coding upstream 282593 29322031 ~ 29388582 (-)
stk40 LOC106583156 coding upstream 372750 29412188 ~ 29443132 (-)
oscp1b LOC106583166 coding upstream 407581 29447019 ~ 29456324 (-)
LOC110517486 LOC106583166 coding upstream 417012 29456450 ~ 29458390 (-)
G242827 NA non-coding downstream 67067 28967594 ~ 28967861 (-)
G242805 NA non-coding downstream 83175 28951536 ~ 28951753 (-)
G242797 NA non-coding downstream 87919 28946809 ~ 28947009 (-)
G242793 NA non-coding downstream 92245 28942438 ~ 28942683 (-)
G242784 NA non-coding downstream 96265 28938332 ~ 28938663 (-)
G243132 NA non-coding upstream 50044 29089482 ~ 29089979 (-)
G243137 NA non-coding upstream 64412 29103850 ~ 29104095 (-)
G243144 NA non-coding upstream 72262 29111700 ~ 29111906 (-)
G243180 NA non-coding upstream 149785 29189223 ~ 29189508 (-)
G243173 NA non-coding upstream 153863 29193301 ~ 29195500 (-)
G242796 NA other downstream 88636 28945741 ~ 28946292 (-)
G242539 LOC106582989 other downstream 304553 28726970 ~ 28730375 (-)
G243154 NA other upstream 92878 29132316 ~ 29152629 (-)
G244338 NA other upstream 1049405 30088843 ~ 30129214 (-)
G244379 NA other upstream 1134575 30174013 ~ 30177408 (-)
G244381 LOC106583245 other upstream 1159794 30199232 ~ 30199770 (-)

Expression


Co-expression Network