Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964376 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 30337723 ~ 30337885 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005051424.1 | True | 163 | mRNA | 0.50 | 1 | 30337723 | 30337885 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rpa2 | rpa2 | coding | upstream | 14152 | 30310185 ~ 30323571 (+) |
| LOC110517644 | NA | coding | upstream | 44502 | 30289328 ~ 30293221 (+) |
| LOC110504010 | LOC106583270 | coding | upstream | 56151 | 30261103 ~ 30281572 (+) |
| LOC110517635 | LOC106583263 | coding | upstream | 116739 | 30218320 ~ 30220984 (+) |
| LOC110517613 | LOC106583245 | coding | upstream | 120030 | 30196595 ~ 30217693 (+) |
| LOC110517739 | med18 | coding | downstream | 25276 | 30363161 ~ 30367437 (+) |
| LOC110504017 | LOC106583301 | coding | downstream | 37690 | 30375575 ~ 30412306 (+) |
| LOC110517766 | LOC106605102 | coding | downstream | 210686 | 30548571 ~ 30576208 (+) |
| LOC118964363 | NA | coding | downstream | 274507 | 30612392 ~ 30612447 (+) |
| LOC110517876 | LOC106583352 | coding | downstream | 277313 | 30615198 ~ 30627079 (+) |
| G244447 | NA | non-coding | upstream | 30878 | 30303389 ~ 30306845 (+) |
| G244446 | NA | non-coding | upstream | 49937 | 30286007 ~ 30287786 (+) |
| G244445 | NA | non-coding | upstream | 53545 | 30283829 ~ 30284178 (+) |
| G244443 | NA | non-coding | upstream | 54765 | 30282533 ~ 30282958 (+) |
| G244433 | LOC106583306 | non-coding | downstream | 20934 | 30358819 ~ 30359857 (+) |
| G244466 | NA | non-coding | downstream | 37006 | 30374891 ~ 30375142 (+) |
| G244481 | NA | non-coding | downstream | 57768 | 30395653 ~ 30395929 (+) |
| G244482 | NA | non-coding | downstream | 59248 | 30397133 ~ 30397350 (+) |
| G244487 | NA | non-coding | downstream | 69140 | 30407025 ~ 30407245 (+) |
| G244292 | LOC106583212 | other | upstream | 200159 | 30132399 ~ 30137564 (+) |
| G243679 | LOC107756720 | other | upstream | 646927 | 29668379 ~ 29690796 (+) |
| LOC110517275 | LOC106583018 | other | upstream | 1303009 | 28995823 ~ 29034924 (+) |
| LOC110516993 | LOC106605183 | other | upstream | 2587997 | 27725189 ~ 27749972 (+) |
| LOC110516984 | NA | other | upstream | 2613929 | 27705985 ~ 27723794 (+) |
| G244691 | NA | other | downstream | 293885 | 30631770 ~ 30632533 (+) |
| G244851 | cep85 | other | downstream | 527681 | 30865566 ~ 30874608 (+) |
| LOC110518244 | LOC106583484 | other | downstream | 580146 | 30918022 ~ 30924289 (+) |
| LOC110518266 | LOC106583495 | other | downstream | 606853 | 30939321 ~ 31127608 (+) |
| G244956 | NA | other | downstream | 698632 | 31036517 ~ 31037252 (+) |
