gnb3a (LOC106583400)


Basic Information

Item Value
gene id gnb3a
gene name LOC106583400
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 30697807 ~ 30710196 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021595792.2
ctctccatcactggaTTTATCCCCTCATCCCTGATCTCTCTTCATCCGCTCCAATCCTCATCTGTTCCtcacaggagagagagtgtgtgtgagagagagagagagagtggaatatccATTCTGTGTGGGACAGGAAAACTGAATAAAAAAACATCTAGTAACAGAAGAGGGGTAAACATATGACAACCAAACGGAGGGACCCTGAAAAGTGAGAACAGGTTAAGAAACCCACTGGAGAACTTCCTTATTTGgaTTACATCTGCTCACCTGATTTCACTTCCTGTCTCCATCGGTGACGACGCCTACCAACCGTTGCCATGGGCGAAATGGAGGAGCTGCGAAAGGAGGCGGACAACCTCAAAGATCAGATCACTGAGGCCCGAAAGGTTGTGCAGGACACCACCCTGCAGGAGGCGGTTGCCGGGACGACGCTTGTGGGACGTGTCCAGCTGAAGACCAGGAAGACACTGAGGGGTCACCTGGCCAAGATCTATGCCATGCACTGGGGCACTGACACCaaGTTGTGTGTCAGTGCCTCTCAAGATGGAAAGCTGATAGTATGGGACACCTTGACCACCAACAAGGTGAGCGCCATCCCTCTGAAGTCGTCGTGGGTGATGACGTGTGCCTACGCGCCCTCAGGGAACATGGTGGCGTGTGGCGGTCTCGACAACATGTGCTCCATCTACAACCTCAAGGGCAAGGACGGCAACGTCAAGGTCATGCGGGAGCTGGCCGCACACACAGGTTACCTGTCCTGCTGTCGTTTCCTTAGCGACAGTGAGATCATCACCAGCTCTGGCGACTGCACCTGTGTTCTATGGGACattgagacagggacagagaagaccATCTTTGCGGGCCACTTGGGTGACTGCATGTCCCTGGCCGTGTCCCCCGACTTCAAGATGTTCATCTCGGGGGCGTGTGACTTCACGGCCAAACTTTGGGACATCAGGGAAGCCACCTGCAGACAGACGTTCAGCGGCCACGAGAGTGACATCAACGCCATCGGGTTCTTCCCCAATGGTAATGCGGTTATAACGGGCTCAGACGATGCCACCTGTAAGCTGTATGACCTGAGAGCAGACCAGGAGCTCATCACCTACCAGGACTCGGGCATCATGTGTGGGGTGACCTCCCTCGCCCCGTCCCTCTCCGGCCGCCTTTTACTGGCCGGATACGATGACTTCAACGTCAACATCTGGGACATGCTTAAAGCCGAGAGAGTGGGAGTGCTGGCTGGTCATGACAACAGGGTGAGCTGCATCGGAGTATCCTCGGACGGAATGGCATGCTGCACAGGATCCTGGGACAGCTTCCTGAAGATATGGAACTGAGCCAGTCCTCTAGTCTAGAGGACAGACAGAACGAAAGACTAaggagaggggaatagaggaaGAATATCGTGAAAACCTGGTAGATTGAcgagagggatgggggggggggagaagactAGGAAGCCATGGGTGAAaggttatttatttttattgtgcCAAGTCTTATTCAATTTGAGAGAAGAATTGTGACGAGAGAGTCTGTCGTCTCTTCCTACTTCCGACTCTAAACTTGAGttaggcagggggggggggggggggacttttgTAGAAAAACATGATCGTTGCATCAATGAATGATTTTATGTCAAGGTTCAAACTGAATTCTAGCGTTATATGAATATATTTCCTATGTCATAAGAGCAGTTGCCAAATGGAAACGGTAGAGATTTGGATGAAATAACAGGATACGACCACAAAATAATTGACCACTGATAAGACTGTGTAGGTTTACAATAACTAGGACGTGACATGCTTTTATATTTGAGGCGAGTTAAACTGCTCGTCAGGGGATGAATATGAAGCATCGATTCGTTTGATGGTTAGAATTCCCTTGTTAAGTTTTCTATTTTTATGGTCACAGAATAAAATGGTTTAGCCTGCAGATttcta
>XM_021595782.2
ctctctccatcactggaTTTATCCCCTCATCCCTGATCTCTCTTCATCCGCTCCAATCCTCATCTGTTCCtcacaggagagagagtgtgtgtgagagagagagagagagtggaatatccATTCTGTGTGGGACAGGAAAACTGAATAAAAAAACATCTAGTAACAGAAGAGGGGTAAACATATGACAACCAAACGGAGGGACCCTGAAAAGTGAGAACAGGTTAAGAAACCCACTGGAGAACTTCCTTATTTGgaTTACATCTGCTCACCTGATTTCACTTCCTGTCTCCATCGGTGACGACGCCTACCAACCGTTGCCATGGGCGAAATGGAGGAGCTGCGAAAGGAGGCGGACAACCTCAAAGATCAGATCACTGAGGCCCGAAAGGTTGTGCAGGACACCACCCTGCAGGAGGCGGTTGCCGGGACGACGCTTGTGGGACGTGTCCAGCTGAAGACCAGGAAGACACTGAGGGGTCACCTGGCCAAGATCTATGCCATGCACTGGGGCACTGACACCaaTTGTAGCAAGTTGTGTGTCAGTGCCTCTCAAGATGGAAAGCTGATAGTATGGGACACCTTGACCACCAACAAGGTGAGCGCCATCCCTCTGAAGTCGTCGTGGGTGATGACGTGTGCCTACGCGCCCTCAGGGAACATGGTGGCGTGTGGCGGTCTCGACAACATGTGCTCCATCTACAACCTCAAGGGCAAGGACGGCAACGTCAAGGTCATGCGGGAGCTGGCCGCACACACAGGTTACCTGTCCTGCTGTCGTTTCCTTAGCGACAGTGAGATCATCACCAGCTCTGGCGACTGCACCTGTGTTCTATGGGACattgagacagggacagagaagaccATCTTTGCGGGCCACTTGGGTGACTGCATGTCCCTGGCCGTGTCCCCCGACTTCAAGATGTTCATCTCGGGGGCGTGTGACTTCACGGCCAAACTTTGGGACATCAGGGAAGCCACCTGCAGACAGACGTTCAGCGGCCACGAGAGTGACATCAACGCCATCGGGTTCTTCCCCAATGGTAATGCGGTTATAACGGGCTCAGACGATGCCACCTGTAAGCTGTATGACCTGAGAGCAGACCAGGAGCTCATCACCTACCAGGACTCGGGCATCATGTGTGGGGTGACCTCCCTCGCCCCGTCCCTCTCCGGCCGCCTTTTACTGGCCGGATACGATGACTTCAACGTCAACATCTGGGACATGCTTAAAGCCGAGAGAGTGGGAGTGCTGGCTGGTCATGACAACAGGGTGAGCTGCATCGGAGTATCCTCGGACGGAATGGCATGCTGCACAGGATCCTGGGACAGCTTCCTGAAGATATGGAACTGAGCCAGTCCTCTAGTCTAGAGGACAGACAGAACGAAAGACTAaggagaggggaatagaggaaGAATATCGTGAAAACCTGGTAGATTGAcgagagggatgggggggggggagaagactAGGAAGCCATGGGTGAAaggttatttatttttattgtgcCAAGTCTTATTCAATTTGAGAGAAGAATTGTGACGAGAGAGTCTGTCGTCTCTTCCTACTTCCGACTCTAAACTTGAGttaggcagggggggggggggggggacttttgTAGAAAAACATGATCGTTGCATCAATGAATGATTTTATGTCAAGGTTCAAACTGAATTCTAGCGTTATATGAATATATTTCCTATGTCATAAGAGCAGTTGCCAAATGGAAACGGTAGAGATTTGGATGAAATAACAGGATACGACCACAAAATAATTGACCACTGATAAGACTGTGTAGGTTTACAATAACTAGGACGTGACATGCTTTTATATTTGAGGCGAGTTAAACTGCTCGTCAGGGGATGAATATGAAGCATCGATTCGTTTGATGGTTAGAATTCCCTTGTTAAGTTTTCTATTTTTATGGTCACAGAATAAAATGGTTTAGCCTGCAGATttcta

Function

NR:

description
PREDICTED: guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3-like isoform X1

GO: NA

KEGG:

id description
K04536 GNB1; guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021595792.2 False 1949 mRNA 0.50 9 30697807 30710194
XM_021595782.2 True 1960 mRNA 0.50 10 30697807 30710196

Neighbor

gene id symbol gene type direction distance location
LOC110517847 tpi1b coding downstream 86008 30606964 ~ 30611799 (-)
LOC118951153 LOC106605099 coding downstream 103980 30592103 ~ 30593827 (-)
LOC110517778 LOC106583350 coding downstream 106722 30577798 ~ 30591085 (-)
LOC110517711 LOC106583306 coding downstream 336037 30343960 ~ 30361770 (-)
LOC110517657 themis2 coding downstream 361635 30323757 ~ 30336172 (-)
p3h3 LOC106583419 coding upstream 3710 30713906 ~ 30725406 (-)
LOC110518094 LOC106583440 coding upstream 90101 30800297 ~ 30811533 (-)
LOC118951441 NA coding upstream 103103 30813299 ~ 30818102 (-)
LOC110518140 cep85 coding upstream 150818 30861014 ~ 30881486 (-)
LOC110518189 NA coding upstream 171472 30881668 ~ 30883558 (-)
G245188 LOC106605095 non-coding downstream 30297 30665203 ~ 30667510 (-)
G245219 NA non-coding downstream 44900 30642354 ~ 30652907 (-)
G245204 NA non-coding downstream 78207 30617895 ~ 30619600 (-)
G245127 atp1a3 non-coding downstream 121590 30518427 ~ 30576217 (-)
G245136 NA non-coding downstream 137030 30544615 ~ 30560777 (-)
G245278 NA non-coding upstream 958 30711154 ~ 30711398 (-)
G245279 NA non-coding upstream 1848 30712044 ~ 30712280 (-)
G245308 NA non-coding upstream 67995 30778191 ~ 30780965 (-)
G245316 NA non-coding upstream 109329 30819525 ~ 30822509 (-)
G244393 LOC106583245 other downstream 480218 30211570 ~ 30217682 (-)
G244381 LOC106583245 other downstream 498037 30199232 ~ 30199770 (-)
G244379 NA other downstream 520399 30174013 ~ 30177408 (-)
G244338 NA other downstream 568593 30088843 ~ 30129214 (-)
LOC110517486 LOC106583166 other downstream 1239761 29456450 ~ 29458390 (-)
G245366 LOC106605077 other upstream 234757 30944953 ~ 30945843 (-)
LOC110518371 LOC106583543 other upstream 852349 31562384 ~ 31631107 (-)
G248239 LOC106605043 other upstream 2709233 33419429 ~ 33419707 (-)
G249485 LOC106584080 other upstream 3647079 34357275 ~ 34359451 (-)
G249978 NA other upstream 4179310 34889506 ~ 34889954 (-)

Expression


Co-expression Network