Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964365 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 33286212 ~ 33286264 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005051415.1 | True | 53 | mRNA | 0.42 | 1 | 33286212 | 33286264 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110518882 | LOC106583857 | coding | downstream | 1433 | 33277982 ~ 33284779 (-) |
| LOC110518858 | LOC106583820 | coding | downstream | 228779 | 33041673 ~ 33057433 (-) |
| LOC110518755 | LOC106583774 | coding | downstream | 272851 | 33006168 ~ 33013361 (-) |
| LOC110518723 | tmm74 | coding | downstream | 525317 | 32757693 ~ 32760895 (-) |
| if36 | if36 | coding | downstream | 648088 | 32596856 ~ 32638124 (-) |
| LOC110518895 | LOC106583864 | coding | upstream | 14851 | 33301115 ~ 33337241 (-) |
| ube3d | ube3d | coding | upstream | 96716 | 33382980 ~ 33401872 (-) |
| prss35 | LOC106583947 | coding | upstream | 221330 | 33507594 ~ 33513383 (-) |
| prdm13 | LOC106583971 | coding | upstream | 524381 | 33810645 ~ 33818250 (-) |
| zgc:172323 | LOC106583978 | coding | upstream | 541959 | 33828223 ~ 33835034 (-) |
| G248152 | NA | non-coding | downstream | 38336 | 33247381 ~ 33247876 (-) |
| G247994 | NA | non-coding | downstream | 74421 | 33211480 ~ 33211791 (-) |
| G247868 | LOC106583830 | non-coding | downstream | 218508 | 33065844 ~ 33067704 (-) |
| G247855 | NA | non-coding | downstream | 237619 | 33047635 ~ 33048593 (-) |
| G247847 | NA | non-coding | downstream | 249712 | 33036200 ~ 33036500 (-) |
| G248189 | NA | non-coding | upstream | 60191 | 33346455 ~ 33346655 (-) |
| G248190 | NA | non-coding | upstream | 60704 | 33346968 ~ 33347313 (-) |
| G248210 | NA | non-coding | upstream | 91745 | 33378009 ~ 33378300 (-) |
| G248213 | NA | non-coding | upstream | 95279 | 33381543 ~ 33381745 (-) |
| G248215 | NA | non-coding | upstream | 115681 | 33401945 ~ 33402258 (-) |
| LOC110518371 | LOC106583543 | other | downstream | 1705010 | 31562384 ~ 31631107 (-) |
| G245366 | LOC106605077 | other | downstream | 2340369 | 30944953 ~ 30945843 (-) |
| G244393 | LOC106583245 | other | downstream | 3068623 | 30211570 ~ 30217682 (-) |
| G244381 | LOC106583245 | other | downstream | 3086442 | 30199232 ~ 30199770 (-) |
| G244379 | NA | other | downstream | 3108804 | 30174013 ~ 30177408 (-) |
| G248239 | LOC106605043 | other | upstream | 133165 | 33419429 ~ 33419707 (-) |
| G249485 | LOC106584080 | other | upstream | 1071011 | 34357275 ~ 34359451 (-) |
| G249978 | NA | other | upstream | 1603242 | 34889506 ~ 34889954 (-) |
| G249990 | NA | other | upstream | 1609694 | 34895958 ~ 34896296 (-) |
| G251462 | LOC106584332 | other | upstream | 2853848 | 36140112 ~ 36144572 (-) |
