me1 (LOC106583951)


Basic Information

Item Value
gene id me1
gene name LOC106583951
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 33532885 ~ 33653066 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036973913.1
CTCATGCTCATCGCTCTGTGTTGTCACTGGGAGAGCTGTCAATGTGCCCAAGAGAGCATTCACCGGCGCATCCACTTGTTGACTTGGGTTCATAACAGAGTTCAGGGTTACTGTACGCTATTTAAAGAGGGAGGCAACATGGCACACGGTTTAGTCAAACGGGAATCGGTCGAGAGTGAGATGCATAAATCCGAAGACCAAAGTAAAATGTTTGTTTACACGAAGAAGAGGGGGTATGACGTTACACGTAACCCCTATCTGAACAAGGGCATGGCCTTCTCCCTGGAGGAACGACTCCAGCTGGGGATCCACGGCCTGCTGCCTCCCTGCTTCCTCAGCCAGGACGTGCAGCTCCTCCGGGTCCTCAAGAACTACGAGATGAAGAGGGACGACCTGGACAGATATGTGTTTCTGATGGGGCTCCAGGACAGGAATGAGAAGCTGTTCTACCGTGTGCTGACGTCCGACACAGAGAGGTTCATGCCTATCGTTTACACCCCCACCGTGGGCCTGGCCTGCCAGATGTATGGCCTTGCCTTCAGGAGACCCAGGGGGCTTTTCATCACCATCCATGACCTCACTCACATCTCCACCGTGCTCCAGAGCTGGCCAGAGAAGGACATACGTGCGGTGTGTGTGACGGACGGAGAGAGGATCCTGGGCCTGGGGGACCTGGGCTGCTATGGCATGGGCATCCCTGTGGGCAAACTGGCACTCTACACGGCCTGTGGAGGCATGCCACCCCAGCAGTGTCTGCCAGTCATGCTGGATGTGGGCACAGACAATGAGGAGCTGCTGAAGGACCCATTGTACATCGGGCTAAGACACAAGAGGATTCGAGGCCAGGCCTATGATGACCTGCTGGAGGAGTTTATGAAGGCAGTGTCTGACAGGTATGGAATGGATTGTCTTATCCAGTTTGAGGACTTTGCCAATACCAATGCCTTCCGTCTGCTGAGCAAGTACCGCGACCAGTACTGCACGTTCAACGATGACATCCAAGGTACCGCTGCAGTGGCGGTGGCCGGCCTACTCGCTGCCCTTCGTGTCACCAAGAGCAAGATGTCAGACCATACCATTGTATTCCAGGGTGCAGGGGAGGCCGCGATGGGGATAGCTGACCTCATCACGATGGCGATGGAGAAGGAGGGACTCCCAAAAGACGAGGCTCTGAGGAAGATCTGGATGGTTGACTCCAAGGGCCTCATCGTCAAGGGCAGAGACCACCTGACCCATGAGAAGGAGAGGTTTGCCCACGAGCACGAGCAGATGAGGAACCTGGTAGATGTGGTGCATGAACTCAAACCCACAGCCATCATAGGTGTGGCGGCCATCTCTGGAGCTTTCACGGAGGAAATCATTCGGGACATGGCCTCGTTTAACGAGAGGCCAATCATCTTCGCCCTTAGCAACCCCACCAGCAAGGCAGAGTGCACTGCCGAGCAGTGCTACGCCATCACAGAGGGGCGGGGCATCTTTGCCAGTGGCAGTCCATTTGACCCCGTGACCCTCCCTGATGGGCGGACGTTCTTCCCTGGCCAGGGCAACAATGCATACGTGTTCCCTGGAGTTGGCCTGGGCGTCACCGCCTGTGCAATCCGACACGTCACCGATGAGATCTTCCTCATCACCGCAGAgACCATTGCCGACCTGGTGACGGAGAAGGATCTGTCGGAGGGAAGACTGTACCCTCCCCTGAACACCATCAGAGATGTCTCTCTCAAGCTGGCCGTAAAAATCGTGGAGTTTGCCTACGAGCACAAGATGGCGACGCTGTACCCGGAGCCTGAGGATAAGGAGGCTTTTGTGCGCTCCCTCGTCTACAGCACCGACTATGACGAGTTTGCTGTGGACTCTTACCGCTGGCCCAAGGACGCCATGACCATCCAGTCATGCAAACTGTGACGTGGCGGAGAGACTGAGGGCGAGGGACGCGGGGCACAAAGGAGAAGTGACAGGAGACCAGGGTCCAGGAAGGGAGTGAAGGAGACGACAGAAGTGCAATATCATCAAGACAATGGCGATTGTGGGTTAATAATGTAAAAGAGAAAATATCTTTATGAATGTGATAGCTACGAGCCAAAATAGACACGatgatcaaataaaattgtaacaATAAGATTGTTTACTTCATA

Function

NR:

description
PREDICTED: NADP-dependent malic enzyme-like

GO: NA

KEGG:

id description
K00029 E1.1.1.40, maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036973913.1 True 2135 mRNA 0.55 14 33532885 33653066

Neighbor

gene id symbol gene type direction distance location
snap91a LOC106583925 coding upstream 25580 33450441 ~ 33559250 (+)
LOC110518918 LOC106583887 coding upstream 90488 33401850 ~ 33442397 (+)
tpbgb LOC106583879 coding upstream 188363 33341367 ~ 33344522 (+)
LOC110518871 LOC100194712 coding upstream 360170 33086509 ~ 33172715 (+)
LOC110518846 LOC106583830 coding upstream 464274 33057896 ~ 33068611 (+)
LOC110504028 LOC106604995 coding downstream 12491 33665557 ~ 33702310 (+)
usp45 LOC106583983 coding downstream 193180 33846246 ~ 33894315 (+)
pnisr pnisr coding downstream 245808 33898874 ~ 33907094 (+)
coq3 LOC106605038 coding downstream 256715 33909781 ~ 33926457 (+)
LOC110519140 LOC106584034 coding downstream 273808 33926874 ~ 33954721 (+)
G248130 NA non-coding upstream 115244 33417329 ~ 33417641 (+)
G248120 ube3d non-coding upstream 137679 33394474 ~ 33395206 (+)
G248113 NA non-coding upstream 150187 33382466 ~ 33382698 (+)
G248112 NA non-coding upstream 150739 33381853 ~ 33382146 (+)
G248111 NA non-coding upstream 151149 33381518 ~ 33381736 (+)
G248552 NA non-coding downstream 21962 33675028 ~ 33675236 (+)
G248619 NA non-coding downstream 79200 33732266 ~ 33732501 (+)
G248624 NA non-coding downstream 82365 33735431 ~ 33735763 (+)
G248627 NA non-coding downstream 85670 33738736 ~ 33738957 (+)
G248134 NA other upstream 108782 33423789 ~ 33424103 (+)
LOC110518733 LOC106583759 other upstream 757098 32771075 ~ 32777409 (+)
G246282 NA other upstream 1673566 31852668 ~ 31859319 (+)
G245930 NA other upstream 1852245 31669958 ~ 31680640 (+)
G245799 NA other upstream 1907842 31492207 ~ 31641357 (+)
G248750 LOC106583978 other downstream 175154 33828220 ~ 33835275 (+)
G248794 NA other downstream 321410 33974476 ~ 33977835 (+)
G248795 NA other downstream 353092 34006158 ~ 34013057 (+)
G249245 NA other downstream 649506 34302572 ~ 34302907 (+)
G249323 NA other downstream 766824 34419890 ~ 34420612 (+)

Expression


Co-expression Network