coq3 (LOC106605038)


Basic Information

Item Value
gene id coq3
gene name LOC106605038
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 33909781 ~ 33926457 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021596396.2
ATTGTGCCCGGAACCAGTAGCTAGTAGGAACTGTCTGTGCACAGCAGTGGTTCCACTCGAACAGTAAGATAATGAATACACCACGGTCACATTGACCTGTCGATACCGAACAGAAACATACATGTAAAAAACAGACCACATGTATTCAAAGAAGTTTGAACGGTTCATCTTAGGGGTTTGTACCCGCTGTTTAACAAGCGCGGTGAATGGCACTACAACTTCAGCTCGGACTGCAGTCAGCTGGACTTCAGTACGTAAACATCACAAGCAGTTTCTTGAGCGTCGCTCTCAAAATGGTTTCGCGGTTGTGAGGATTCGCCATGCCTCCAAGACCACTGTGGACCCAAATGAGGTGAAGAGGTTCCAGCTTCTCGCCACCAAGTGGTGGAACGAGCAGGGAGACTTCGCAGCCCTCCACTCAATGAACGACCTCAGGGTGCCTTTCATacgGGATAATCTGTTGAACGCACATGGCGGGCGGCAGCCGGGGAAACCCCTGGCAGGGCTCAGAATACTGGACGTAGGCTGTGGCGGGGGGCTGCTCACTGagCCCTTGGGTAGACTGGGGGCAGATGTGCTAGGCATTGACCCGGTGGCAGACAGTATTGGGACAGCTGAGGTACATGCCTGGCATGATCCAGACCTGCGTGGCAATGTGCGCTACCGTGCCATCACTCTGGAGGAGCTCTCtgagaagggggggaagggagcgGGGCAGTTTGATGCGGTGGTGGCCTCTGAGGTGGTGGAACATCTGGCTGACCTGGAAACCTTCACACTCTGCTGCAACCAGGTGCTCAAGCCAGGAGGCTCCCTCTtcatcaccaccatcaacaaGACCCAGCTGTCGTACGCCCTGGCCATCGTGGCAGCAGAGGAGGTGCTACGCATCGTGCCCAGCGGAACCCATGACTGGGATAAGTTTGTCAGCCCCGTGGAGCTGGAGCGCCTGCTGGAGTCCAATGGTTTCCATGTGGAGTCTATCCGAGGGATGCTGTATAACCCTCTGTCAGGGGCCTGGAGCTGGACAGAGAGCACCAGCATCAACTACGCCCTGCACGCGGTCAAACTCGAGGAGGAACCGAACCCCGACGAGGACGACACCGAAGACCCCACCGTGATAGTTGCCCAAGCTAAGGCCAGACGCTGGTACAACTGACTTGACCATGGAAGAGAGAGTGGTCATACGTGGTCAGCTGCAGCACAGATCTTCTGATCTCTGAAAGGAAAGGCAATGGACCTAAAAAAACAAAGCTATTGAAAGTTATAGTTCAGTGCTTGATACAAGTACATGATGTTTTCTTGCAGCCAGGCCATGATTGTTCTGTGAGTTCAAGCATAATGAGTCCCTCTGAATTGTGTGAACTGTTTAAGCTTTCGAGGCTTGTCATTACAATGCCATCTGTTATGGTAGAAGTGTTCGTCACCATGGTTGACATCTCAGGTCTCTGATTTACTATTGAGCAAGATGTTTTCTTCAAGTAGAGTCACAATGTGTCTGTTCATAAAAATCCATTGTGTGGATATTGTTTGTCTTGACATGCTTATTAATATCCTCCATTAGGAAATGAAATAGTTTCCTttaagattctctgatctgatgattTATTCCTCTCTAGTGTCATTTCAACAGTGTGAAAATATAGTCCAAATCAGT

Function

NR:

description
ubiquinone biosynthesis O-methyltransferase, mitochondrial-like

GO: NA

KEGG:

id description
K00591 COQ3; polyprenyldihydroxybenzoate methyltransferase / 3-demethylubiquinol 3-O-methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021596396.2 True 1657 mRNA 0.51 6 33909781 33926457

Neighbor

gene id symbol gene type direction distance location
pnisr pnisr coding upstream 2687 33898874 ~ 33907094 (+)
usp45 LOC106583983 coding upstream 15466 33846246 ~ 33894315 (+)
LOC110504028 LOC106604995 coding upstream 207471 33665557 ~ 33702310 (+)
me1 LOC106583951 coding upstream 256715 33532885 ~ 33653066 (+)
snap91a LOC106583925 coding upstream 402476 33450441 ~ 33559250 (+)
LOC110519140 LOC106584034 coding downstream 417 33926874 ~ 33954721 (+)
fbxl4 LOC106605030 coding downstream 93376 34019833 ~ 34041157 (+)
mms22l mms22l coding downstream 330896 34257353 ~ 34288713 (+)
LOC110519256 LOC106584073 coding downstream 420672 34347129 ~ 34351764 (+)
LOC110519270 LOC106584080 coding downstream 429627 34356084 ~ 34359512 (+)
G248781 NA non-coding upstream 12537 33897013 ~ 33897244 (+)
G248779 NA non-coding upstream 13332 33896185 ~ 33896449 (+)
G248754 NA non-coding upstream 69683 33838982 ~ 33840098 (+)
G248750 LOC106583978 non-coding upstream 74506 33828220 ~ 33835275 (+)
G248733 LOC106583971 non-coding upstream 91533 33816004 ~ 33818248 (+)
G248810 NA non-coding downstream 29101 33955558 ~ 33957622 (+)
G248824 NA non-coding downstream 54860 33981317 ~ 33988384 (+)
G248825 NA non-coding downstream 60234 33986691 ~ 34072760 (+)
G248828 NA non-coding downstream 75391 34001848 ~ 34004925 (+)
G248134 NA other upstream 485678 33423789 ~ 33424103 (+)
LOC110518733 LOC106583759 other upstream 1133994 32771075 ~ 32777409 (+)
G246282 NA other upstream 2050462 31852668 ~ 31859319 (+)
G245930 NA other upstream 2229141 31669958 ~ 31680640 (+)
G248794 NA other downstream 48019 33974476 ~ 33977835 (+)
G248795 NA other downstream 79701 34006158 ~ 34013057 (+)
G249245 NA other downstream 376115 34302572 ~ 34302907 (+)
G249323 NA other downstream 493433 34419890 ~ 34420612 (+)
rab42b rab42 other downstream 1227245 35153546 ~ 35173463 (+)

Expression


Co-expression Network