Item | Value |
---|---|
gene id | LOC110519296 |
gene name | LOC106584119 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048567.1 |
NCBI id | CM023221.2 |
chromosome length | 85311031 |
location | 34413649 ~ 34426171 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
unnamed protein product |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021596450.2 | False | 5712 | mRNA | 0.46 | 14 | 34413649 | 34426169 |
XM_036973925.1 | False | 5704 | mRNA | 0.46 | 14 | 34413649 | 34426171 |
TU284629 | True | 1884 | lncRNA | 0.38 | 1 | 34413656 | 34415539 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110519284 | LOC106605036 | coding | downstream | 29542 | 34363003 ~ 34384107 (-) |
klhl32 | LOC106605029 | coding | downstream | 84826 | 34291510 ~ 34328823 (-) |
LOC110504035 | LOC106581764 | coding | downstream | 165045 | 34088843 ~ 34248604 (-) |
pou3f2b | LOC106584047 | coding | downstream | 331954 | 34078198 ~ 34081695 (-) |
LOC110519190 | NA | coding | downstream | 367281 | 34045603 ~ 34046368 (-) |
adcy3a | LOC106584132 | coding | upstream | 2412 | 34428583 ~ 34456802 (-) |
LOC110519356 | lyplal1 | coding | upstream | 73974 | 34500145 ~ 34506986 (-) |
tgfb2 | LOC106584161 | coding | upstream | 150899 | 34577070 ~ 34613851 (-) |
LOC110519379 | NA | coding | upstream | 170729 | 34596900 ~ 34601665 (-) |
LOC110519387 | LOC106584165 | coding | upstream | 190561 | 34616732 ~ 34629879 (-) |
G249501 | NA | non-coding | downstream | 169 | 34411974 ~ 34413480 (-) |
G249522 | NA | non-coding | downstream | 12577 | 34400789 ~ 34401072 (-) |
G249514 | NA | non-coding | downstream | 24567 | 34388866 ~ 34389082 (-) |
G249513 | NA | non-coding | downstream | 24919 | 34388516 ~ 34388730 (-) |
G249497 | NA | non-coding | upstream | 775 | 34426946 ~ 34427645 (-) |
G249499 | NA | non-coding | upstream | 1714 | 34427885 ~ 34428366 (-) |
G249537 | NA | non-coding | upstream | 18048 | 34444219 ~ 34444546 (-) |
G249502 | NA | non-coding | upstream | 44000 | 34470171 ~ 34471282 (-) |
G249485 | LOC106584080 | other | downstream | 54198 | 34357275 ~ 34359451 (-) |
G248239 | LOC106605043 | other | downstream | 993942 | 33419429 ~ 33419707 (-) |
LOC110518371 | LOC106583543 | other | downstream | 2832447 | 31562384 ~ 31631107 (-) |
G245366 | LOC106605077 | other | downstream | 3467806 | 30944953 ~ 30945843 (-) |
G244393 | LOC106583245 | other | downstream | 4196060 | 30211570 ~ 30217682 (-) |
G249978 | NA | other | upstream | 463335 | 34889506 ~ 34889954 (-) |
G249990 | NA | other | upstream | 469787 | 34895958 ~ 34896296 (-) |
G251462 | LOC106584332 | other | upstream | 1713941 | 36140112 ~ 36144572 (-) |
G251681 | NA | other | upstream | 1931312 | 36357325 ~ 36357971 (-) |
gpatch3 | gpatch3 | other | upstream | 2305674 | 36731832 ~ 36754332 (-) |
G249451 | NA | non-coding | downstream | 110178 | 34303111 ~ 34303478 (-) |