tent5ba (fam46b)


Basic Information

Item Value
gene id tent5ba
gene name fam46b
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 36544170 ~ 36568553 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021596781.2
TAGTACACAGGTTGTGCCAAACATTTCTCTGCACTGACTGGTGGCACTCGCAACAAGGCAAGGTCTTGATAATTAATGAGTGAACAAAAAAAATCAGAGCCTCTATGCAAATGAGGAGCCTTTATAGACCTTGGATGAGCTTTTTGGATAACGATTCGCTGCAAACTTGTGACTGATCAGCTTAACAtctgtggataaagagttaagCGTGTCTTGCATTTCAAACTTCAAGTATCTGACAGCAATCACGTCTTCATTACTTTGCTGAATGAGGAAACGGATACTGAACATTTGTAGGCTATTGGAATTTACCACGGTTGACCAAACTCATCCATTCATTATTCCCCCCTGCATTTTTAAGACGCACACCTCAACCGATTGATCCGGGAGTGATACAGCAAGATTAGACTACCGCATTCTTTCCAATATATTTTTAAACTCTGTTCAGTGCCACATCGCCATGTCAAGCGATACATCGGATCAGAGTAGGCGGTTCTGTGTGCTGTCTTGGGATCAGGTACGTCGTTTGAACTCAATCATCAGAGAAGCAATCCCGATTCACGGCCGCGGAAATTTCCCTACACTCTCTCTACAACCCCGGCAGATCGTTCAGGTGGTGCGGGCGCGGCTGGAGGAGAGGGGCGTGTCAGTACGAGACGTGCGGCTGAACGGCTCTGCAGCCAGCCACGTGCTCTACCAGGACACTGGCATGGGCTACAAGGACCTGGACCTGATCTTCGGTGTGTCTCTGAAGGACGACCAGGCTTTCCGGCTAGTCAAGGACGTGGTAATGGACTGCCTATTGGACTTCCTACCAGCGGGGGTCAGAAAGGAGCGCATCTCGCCGCTGACCCTTAAAGAGGCCTACGTGCAGAAACTGGTGAAAGTATGCAACGACACAGACCGCTGGAGCCTCATCTCACTGTCCAACAACACGGGCAAGAATGTGGAGCTCAAGTTCGTGGACTCTCTCAGGCGGCAGTTTGAATTCAGTGTGGACTCCTTCCAGATTGGCTTGGACTCGCTGCTGCTGTTTGACCACTGCTCAGAGACGGCCATGTCCGAGAGCTTCCACCCCACCGTGATTGGGGAGAGTGTGTATGGGGACTTTGAGGGTGCCATCGGTCATCTGTGTCAGCGGATCATTGCCACGCGCAGCCCCGAGGAGATCCGAGGCGGGGGGCTACTTAAGTACTGCCACTTGCTGGCGCAGGGGTTCAGGCCCATCTGTGAAACAGAGATGAAGGCTCTGCAGCGCTACATGTGCTCGCGCTTCTTCATCGACTTCTCTGACATCTGCGAGCAGCAGCGTAAGCTGGAGGCCTACCTGCAGAACCACTTTGCCGGCATGGAGCACAAGCGCTATGAGTGCCTGATGACTCTGCACCAGGTGGTGAATGAAAGCACTGTGTGTCTGATGGGCCATGAGCGGCGCCAGACGCTCAGCCTCATCTCTATGTTGGCGCTACAGGTGCTGGCTGAGCAGAACGCCATCCCCACGGTGACCAACGTCACCTGCTTCTACCAGCCCGCACCCTACGTGCGTGACATCAACTTCAGCAATTACTACATAGCACATGTGCAGCCACAGCCACCGCTAGTTCACTACAGTAACTCTCACCATACTTGGCTGCACTGTAACTGAGCTAACAAGCATGTGCAGGGCAGaggtggatgtggatgtggcATCCAATGTTTCTCTCCATTGGGTTGGAGCTGCGGAATGGCAGCATTGCTCTTTGtctttcaaaataaataaataaactaagcAAATGGAAATGTGACTTGACTGAAACGATCCTTTACTGCTGTATGATTTTAGCCAATCTTCTCTCAACAATTGTATTTCTCCTCACACAACGTTTGTTAAGTTGACGGTCCTTTTCACATGTAACAAGAATGTTGAAGTAGTTCCTTAAGTGAGAAAGAAatcttagattttttttaaataagaaaataaaaacattgattTTGGAAGAAACAAACTATGAAGCTTTATTTTCAGACTGCTGCTtcagttattttttaaacaacagTTACAGgaccaaatatgtattttgttCAGAACAGAAGGGATTATTGTGATTCCAAGTGCCTAAAATGATCTGAGCAATTTTCAAAAATGCCTCTGTAAAGTGagagctgtgtttttttttttaggggtTTGTGTTGCCTAGATTACTCCAAATCTCTTTTCAGGAACAGACATTCATCTTCATGcgattttaaataaataaaaaaaaaaaatatcctcgTGTTTTTTAAATTCTGAAATATGTGTATTATAAGCATAGCCTGTGTAAATGGGAAAGAAAGGCCTTGATAttgttgggttctgagaatatgaaatatacttattcatgtcactgagggagtgCTGAGGTTTAGAGTGTACACCAGAAGggaatggttataggaggaacgTATATAGTgtgcaattaagcttggaatgtggCAGGCATTGGGGAGAGAGCCATGGATTAGTGATGGAGGGGGGTTCAGGTCAGGTCACATTAAGGGAGAAATAAAAGTTTACAGGATCCATAAACTAGTATCACTAGTGTCCTCCCTAGCAGTAAAGAACGATGTTTGTACCGATGTGTAGGAGTGCTTGTGTacatatcagtgcttgtgtgaaaatgtttttgtctaatgcagctgcattgatcctctgggaagaataaacttgggTAAGCTTTCATAGTGTCTGAGTTTTTTAgtctgagaattagaacctaacaataCCAAAATAGCTCCTAGTTTATGGATCCTGTCATCTGTTGTACATGCATCTTTAACTACCCATAAAGGGATAGGATTTCTACACCATAAAAACTGTGGGGACTGTAAGTTGCTCTAGATAACAACAAAAATGCAGCTGTCCACCCTTTTAAGAGGGTAATGTAGCTATGATTATCTTGATGACATACTGACAACTAAGACAACCCAGACCAGTTCCAGGAATTAGCCTGTGGAAAAACATAGTGTCTGTTGAGTGAGTGCCACTTCTTAAACTGGGCTTGTAAGATCCATTACAATCTGAGGACATGAACCATAAGAAGGCCTTTCTGAAGCACAATGGCCTCTCTCTGGTGTGATACTAAAGCTTTGACAAAGGCTGGTTTGTTCTCCCACCCATGTTGCCAGTGGAAACTGAATCCTATTTGCTTGAATAACGCCATATCCATGTTATTTTGCTTGTGTATATATCAGAATATGGTTGCGTCACTGGTTGAGTGGCCAGCGTGGATTAATACATGGTAAAATGTGGCGGAGGGAGTGGATGCCCATCTGGAATTGTCATTTCCTTTCACTTGCTTGATTGATACTTGGGAG

Function

NR:

description
protein FAM46A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021596781.2 True 3336 mRNA 0.45 2 36544170 36568553

Neighbor

gene id symbol gene type direction distance location
LOC110504056 NA coding downstream 38831 36486875 ~ 36505339 (-)
LOC110519907 oprd1 coding downstream 106416 36436381 ~ 36437754 (-)
stmn1b LOC106584327 coding downstream 426626 36112187 ~ 36117544 (-)
LOC110519653 LOC106584320 coding downstream 434981 36102843 ~ 36109194 (-)
si:dkey-34d22.1 LOC106584244 coding downstream 1341227 35175483 ~ 35202943 (-)
zdhhc18a zdhhc18 coding upstream 43262 36611815 ~ 36629130 (-)
LOC110519930 LOC106584694 coding upstream 67776 36636329 ~ 36643205 (-)
LOC110519931 pigv coding upstream 90671 36659224 ~ 36664245 (-)
LOC110519933 NA coding upstream 96176 36664729 ~ 36686126 (-)
LOC110519934 gpn2 coding upstream 126482 36695035 ~ 36710909 (-)
G252135 yo84 non-coding downstream 143430 36399833 ~ 36400740 (-)
G252127 NA non-coding downstream 150555 36393348 ~ 36393615 (-)
G252125 NA non-coding downstream 154208 36389498 ~ 36389962 (-)
G252124 NA non-coding downstream 155185 36388333 ~ 36388985 (-)
G251696 NA non-coding downstream 171957 36371805 ~ 36372213 (-)
G252248 NA non-coding upstream 12838 36581391 ~ 36581648 (-)
G252251 NA non-coding upstream 14888 36583441 ~ 36583657 (-)
G252255 NA non-coding upstream 16685 36585238 ~ 36585472 (-)
G252260 NA non-coding upstream 23087 36591640 ~ 36592079 (-)
G252136 NA non-coding upstream 35710 36604263 ~ 36605654 (-)
G251681 NA other downstream 186199 36357325 ~ 36357971 (-)
G251462 LOC106584332 other downstream 399598 36140112 ~ 36144572 (-)
G249990 NA other downstream 1647874 34895958 ~ 34896296 (-)
G249978 NA other downstream 1654216 34889506 ~ 34889954 (-)
G249485 LOC106584080 other downstream 2184719 34357275 ~ 34359451 (-)
gpatch3 gpatch3 other upstream 163292 36731832 ~ 36754332 (-)
LOC110519955 LOC106586057 other upstream 2830708 39399261 ~ 39508811 (-)
G255911 NA other upstream 3076018 39644571 ~ 39645743 (-)
G256016 LOC106581772 other upstream 3250095 39818648 ~ 39818980 (-)
G256616 NA other upstream 3753953 40322506 ~ 40322898 (-)

Expression


Co-expression Network