LOC110519932 (LOC106591969)


Basic Information

Item Value
gene id LOC110519932
gene name LOC106591969
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 36657467 ~ 36659553 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005044177.1
CCGGTCAGTCTAGTTGTTATCGACGATATAACGTTACTACCACTATGTCGCAGTTTTTTTACTAGGGGTCTTCAGGACTTGCCTCAAATTAATATTAATGATGTACATCAAATTGTTAAATCAGCCTCAGAGACTCCAGCTAGCAAGAATGAAAAGGGGTTCAAGATGTATATAGGAAGCTACATAGACAACTATGAAGGGTGTGAAACCAGGTCCGATTGATGGGATAGAGTTCCGTAAACCTACTAACTCGTATGCTGATGGAATAAGAAGTTCTCTCTACAAAGCACTCAATGGATACATGCCTGACATGGACCTTCTCCGCGTCTCAGAAACGTATGCCAACTTTTCTCCACTTTACTGCCCCTCgtgacaacaatggaaatgtcagCTGACGTGCCCCTGGTTGAGTCTGCCTTTGGGCCAGTGCAAGCCAGCAGTGTTCTGTCCTATCAGCTTCCACAGCCAAAGACCTGTTACATTGTGAAGATTGACAATTCCACTTCTCCACCAATACTTCCATTAGATGGCTACAGGCTTCAGGCTTCCCAGTGTGCTGAAGCCATCAGGAGCAGTTACACCTCAAGGCATTAGAGACAACCTACGAGATGTCACACAAAGTCGAGGTTGCTACAAGGGAGCAGAGCAGCAGCCCAGAATGGCATCAGCTCAGGAAAATAAGAATATCATCCTCTCATTTCCGAGAGGATTGCCATGTCCAGGGAGACACCTCAGGTGACCACCTAGCTGAGCGGATGTTCAAGGGATCTGGTATGCAGACCATGGAGATGAAGGGGGCTAGCCATGGAGCCAGTGGCTGTACAGGGATCTGGAATACAGACCATGGAGATGAAGAGGGCTAGCCATGGAGCCAGTGGCTGTACAGGAGTACTGCACACTGAAGAATGTTAACATCTTTCCGTGTGGCTTCGCAGTGCACCCAGATGCTCCGTGGTTAGGATCCTCTCCAGATGGAATCATATTTGATCCCAGTGTGAGACCAAACTTTGGACTCTTAGAGGTCAAGTGCCCAAAGGTACCAAGTTATGTTGACGGCCCTTACCTGAAGATACAGAATGGAGAGCTGAAGTTGAAGAGATCTCATGCT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106591969

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005044177.1 True 1108 mRNA 0.47 3 36657467 36659553

Neighbor

gene id symbol gene type direction distance location
rcc1 rcc1 coding upstream 270251 36381470 ~ 36387216 (+)
phactr4b LOC106584362 coding upstream 289151 36317313 ~ 36368316 (+)
LOC110519762 LOC106584688 coding upstream 355898 36293824 ~ 36301569 (+)
LOC110519702 LOC106584341 coding upstream 395500 36172193 ~ 36262289 (+)
serinc2l LOC106584332 coding upstream 512880 36125327 ~ 36144587 (+)
LOC110519936 LOC106586041 coding downstream 759553 37419106 ~ 37424336 (+)
LOC110519939 LOC106604981 coding downstream 826030 37428004 ~ 37489579 (+)
si:ch211-184m13.4 LOC106586045 coding downstream 1029235 37688788 ~ 37691898 (+)
LOC110519942 LOC106586050 coding downstream 1089142 37748695 ~ 37756709 (+)
LOC110519944 LOC106586047 coding downstream 1574790 38234343 ~ 38250022 (+)
G251871 NA non-coding upstream 1852 36655282 ~ 36655615 (+)
G251869 NA non-coding upstream 3975 36653262 ~ 36653492 (+)
G251840 NA non-coding upstream 46153 36610884 ~ 36611314 (+)
G251835 NA non-coding upstream 60595 36596666 ~ 36596872 (+)
G251832 NA non-coding upstream 63619 36593638 ~ 36593848 (+)
G251881 NA non-coding downstream 5204 36664757 ~ 36681878 (+)
G251860 NA non-coding downstream 35487 36695040 ~ 36766699 (+)
G251914 NA non-coding downstream 74973 36734526 ~ 36749257 (+)
G251938 NA non-coding downstream 107859 36767412 ~ 36772802 (+)
G251999 NA non-coding downstream 218200 36877753 ~ 36878007 (+)
G251845 zdhhc18 other upstream 29925 36623610 ~ 36627542 (+)
G251773 NA other upstream 132294 36511574 ~ 36579307 (+)
LOC110519579 gmeb1 other upstream 1436095 35203647 ~ 35221874 (+)
rab42b rab42 other upstream 1484004 35153546 ~ 35173463 (+)
G249323 NA other upstream 2236855 34419890 ~ 34420612 (+)
G253299 NA other downstream 1067395 37726948 ~ 37727338 (+)
G253834 LOC100136012 other downstream 1432769 38092322 ~ 38092734 (+)
G254204 NA other downstream 1781613 38441166 ~ 38441734 (+)
G254445 NA other downstream 1940934 38600487 ~ 38600866 (+)
G254816 NA other downstream 2183957 38843510 ~ 38844556 (+)

Expression


Co-expression Network