clybl (clybl)


Basic Information

Item Value
gene id clybl
gene name clybl
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 37443635 ~ 37641452 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021596826.2
GAGGCCAATCAGAGCTCTTCGTTTGCTCAAGAGAAATACACCAGTAGCCAATCCCGTTGTACTTATAGAAAACGTTGAAACAAAATGGCGCAGTCCATAATTCGAGCTATCAGACGAGCTGTCCCACAGGACACTCGCTGCTTCCTGTCTGTGGCTTTACCATGGTGTCATGGTGGATGTCACAGCCATCACGTAGCTTGTACCAACCTGAGATATGTGCCGCGGCGCGCCGTGCTCTACTGCCCCGGCAATGATGAGAGGAAGCTGAGGAAACTGGCATCGCTGCGTGGCCTAGATTGTGCCGTATTGGACTGTGAGGATGGAGTGGCCCTTAGCAAGAAGACGGAGGCAAGGGAGACCATCCCCAGGATGCTGGCAGAGCTGGACCTGGGCAGGACAGAGAAGTGTGTGAGGGTCAACTCAGTGTCCAGCGGCCTGGCGAATGCTGACCTACAGGTCATCCTGCAGGCCGAGGTTCTGCCTCCAGCCCTGATGCTGCCCAAGGTGGAGGACGCAGCGGAGGTGCAATGGtttgTTGGCAGGTTTCAGCACCACTTGAATGGACGAGCGCTGACGGAGCCCATTCGCCTGGTCACCTTTGTGGAAACCGCTGTGGGCCTGCTCAATTTTAAGGTTGTATGTGAGGAAGTACGTCGTCTGGCTCCTGCAGTTGGCCTACACCATGACGGTGTGGTGTTTGGATCCGATGACTTCTGTGCCAGCATAGGTGCCACGCGGACCAAGGATGCCAGGGAGCTGCTGTATGCCCGTCAGAAGGTGGTAGTGACAACCAAGGCCTTCGGTCTACAAGCCATAGACTTGGTCTACATAGACTATAAGGACGGAGAGGGTCTACGACAGCAGGCAAGGGAGGGAGTTCTCATGGGCTTCACAGGTAAGCAGGTGATCCATCCCAACCAGGTCCAGGCGGTACAGGAGGAGTTCTCACCCAGTCAGGAGAGGGTCCAGTGGGCTACAGAACTGATTGCTGCCTTTGACGAGTACCAGAAGCTGGGAAAGGGTGCCTTCAACTTCCGGGGCAGTATGATCGACATGCCCTCAGTGAAGCAGGCTCAGAACATCGTAACGCTAGCTGCTGCCGTCACGGGGAAGTGAGGCGCTCTGGAAGAAGATATGGGGGGAGGAAAGAACAGAGGAGTGAAATGAGGGGACGGAAAAACTAGACAagttgagagagagtgagaagtgtCACTTTTATGTATACGCTGGCATTAGCGAGAGGTGAATGTATACCACCGGACACCCCAAATACTTCGACCAGACAGGTTTATCAGCTGGTATCAAGCACCAACATTTCAGAAACTTTGTACTAGGCCTGGTGTATAGTCACTTAAATTctagatgtttttttgttttgtttttattaaatTGATTATTGTTGATAAATTAAATGCATTTGATTAATTTGTTCACTGATAAAGCACTAAATGTTTGATATTCATATCCTACGGTGTCTTTGTGGTAAGAATGACAGGTTTACGGTTAATGTTTTAGACtgatgttaatgttgtaaagCAGGATATTATTTGACACTTTCATACTACTGACTGTGCCaaactgcactgcactgcactggccTGGTTGCGCATGtaccatagttgctggaaccaTGCTGGAAAGGGCAATTTGAGAAGAAAATATCCATGCCAGCACATTACAGTTCGGGTTGGCACGATGGTTGTGAAAATACTATTTAAGAATTCCAGTTGTTTCAATGGTAACCGACATGAAAActtctacagtttactatagaatactacagtacttactatagaatgatGTAGTGAACTGTTGTATCCTGTAGAATCTGTAGTATCCTTtgacacactgtagtatccctcgatcatgtgtagtacgTACTATACAATGTtgtatactatagtaaatactgcagtatactacagtctgcaaaaacacaacaGTGAAGTCAgcaaaaatactacagtaatgctaCAGTACTTAATTTGCCTATACCCTCCCCATTCCCCTCCcgccacccataagtgagaagcctacatgccaagtatagactaTAATGTGTTCCCTACACGTTATAAGAAAGAGCAGAAGCTATGAAATatctgttcagaccccagtccaaCCTAcatacaggttatggaaaatgtgcTCTTATTTGTCTAATAGGTTTCCTCAATGAGAAGATCCCCACTTATATGTCAAAGATTATAAAACAAAAGCACTATAgtgctacagtaatactacagtaatgtccgcaaaaCCACCACAGTAATTACTACAGCATATATACTATAGTAAACAGTAGGTACCATAACATTATTACAGTCTGCAAttactatatattttttattattgtattatttaactaggcaagtcagttaagaacaaattcttattttcaatgacggcctaggaacagtgggttaactgccttgttcaggggcagaacaacatatttttaccttatcagcttggggattcgatcttgcaaccttttggttacaggtcaaacgctctaaccactaggctacctgccgcccctaggcTTCCTGCAGCCCCAATACAACAGTGTTTATACTATAGTAaactatagtattttttcatgtggtaATGAAGCGTCCAGGATTACACTAGGGGGTGCGGGAACTTTTTGGCAGTGCGTGTGCCTTTGCCTCCTGCCTCTCCTGGGTCATGACAGATGCTCACCCACCTCCAGGGTCCAGCTGGGTGAAAGGCtaaacaaacacaacaagacGCTGTTGTTCTTCCATTCAGGCTGGGCACTgtgggcacacacagacacagacacagacacactccttCGGGCCCCAGCACTCAGCCCCACATCAAAGCTCTGTTTGCTAAAGAGCCTTAACACATTTAGTTATAGCAACAATCTGAGATTTTGCTTCAGTCCTGTCAGTAAAGCTGAGGTCTTTGTGTGTGGACTGAGGGCCGATGTTCTTCTTGAAGGGGCCGTATTAATACGATTGAACTGGGCATCAGGCTCTCACTGACCTCAGCACCAGAGATGCATACAAACCACGGATTCAAACAGGCACTAACATGTAAATACATGCACTGTCTCTGTGtatcatacacacaaacatattcTCAAACACACACTTTGACCATTTATCgcaaaataaaaaattaacaaaTGTC

Function

symbol description
clybl Predicted to enable (S)-citramalyl-CoA lyase activity. Predicted to be involved in regulation of cobalamin metabolic process. Is expressed in brain. Orthologous to human CLYBL (citramalyl-CoA lyase).

NR:

description
citrate lyase subunit beta-like protein, mitochondrial isoform X2

GO:

id name namespace
GO:0006725 cellular aromatic compound metabolic process biological_process
GO:0009346 citrate lyase complex cellular_component
GO:0046872 metal ion binding molecular_function
GO:0008815 citrate (pro-3S)-lyase activity molecular_function

KEGG:

id description
K11390 CLYBL; citrate lyase subunit beta-like protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021596826.2 True 3165 mRNA 0.46 8 37443635 37641452

Neighbor

gene id symbol gene type direction distance location
LOC110519937 zic2 coding downstream 28374 37410268 ~ 37416025 (-)
LOC110504063 serpind1 coding downstream 551099 36882314 ~ 36906191 (-)
gpatch3 gpatch3 coding downstream 689303 36731832 ~ 36754332 (-)
LOC110519934 gpn2 coding downstream 732726 36695035 ~ 36710909 (-)
LOC110519933 NA coding downstream 757509 36664729 ~ 36686126 (-)
LOC118944514 NA coding upstream 47323 37688775 ~ 37692204 (-)
LOC110519943 LOC106586049 coding upstream 173257 37814709 ~ 38062756 (-)
LOC110519945 LOC105007140 coding upstream 622346 38263798 ~ 38401288 (-)
LOC110519947 LOC106586044 coding upstream 1135486 38776852 ~ 38778156 (-)
LOC110519948 mycbp2 coding upstream 1154241 38795693 ~ 39140087 (-)
G253038 NA non-coding downstream 33460 37409948 ~ 37410175 (-)
G253029 NA non-coding downstream 48148 37395208 ~ 37395487 (-)
G253027 NA non-coding downstream 49206 37394211 ~ 37394429 (-)
G252874 NA non-coding downstream 54121 37389225 ~ 37389514 (-)
G253183 NA non-coding upstream 4507 37645959 ~ 37646248 (-)
G253298 NA non-coding upstream 85184 37726636 ~ 37726856 (-)
G253301 NA non-coding upstream 86948 37728400 ~ 37728600 (-)
G253331 NA non-coding upstream 107212 37748664 ~ 37756710 (-)
G251681 NA other downstream 1085664 36357325 ~ 36357971 (-)
G251462 LOC106584332 other downstream 1299063 36140112 ~ 36144572 (-)
G249990 NA other downstream 2547339 34895958 ~ 34896296 (-)
G249978 NA other downstream 2553681 34889506 ~ 34889954 (-)
LOC110519955 LOC106586057 other upstream 1757809 39399261 ~ 39508811 (-)
G255911 NA other upstream 2003119 39644571 ~ 39645743 (-)
G256016 LOC106581772 other upstream 2177196 39818648 ~ 39818980 (-)
G256616 NA other upstream 2681054 40322506 ~ 40322898 (-)
G256632 NA other upstream 2693758 40335210 ~ 40335440 (-)

Expression


Co-expression Network