Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110519950 |
| gene name | LOC106586053 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 39171897 ~ 39214104 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| SLAIN motif-containing protein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021596859.2 | False | 2853 | mRNA | 0.50 | 9 | 39171897 | 39214104 |
| TU290368 | True | 335 | lncRNA | 0.44 | 1 | 39172109 | 39172443 |
39,130,000
39,140,000
39,150,000
39,160,000
39,170,000
39,180,000
39,190,000
39,200,000
39,210,000
39,220,000
NC_048567.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519946 | NA | coding | upstream | 411407 | 38635946 ~ 38760490 (+) |
| LOC110519944 | LOC106586047 | coding | upstream | 921875 | 38234343 ~ 38250022 (+) |
| LOC110519942 | LOC106586050 | coding | upstream | 1416445 | 37748695 ~ 37756709 (+) |
| si:ch211-184m13.4 | LOC106586045 | coding | upstream | 1479999 | 37688788 ~ 37691898 (+) |
| LOC110519939 | LOC106604981 | coding | upstream | 1682327 | 37428004 ~ 37489579 (+) |
| trnaf-gaa | NA | coding | downstream | 179537 | 39393641 ~ 39393713 (+) |
| LOC110519956 | LOC105026395 | coding | downstream | 394065 | 39608169 ~ 39621078 (+) |
| LOC110519960 | LOC106586058 | coding | downstream | 444649 | 39658753 ~ 39668297 (+) |
| LOC110519963 | LOC106586016 | coding | downstream | 492337 | 39706441 ~ 39709665 (+) |
| LOC110519964 | LOC106586025 | coding | downstream | 499586 | 39713690 ~ 39741849 (+) |
| G255067 | NA | non-coding | upstream | 9018 | 39162480 ~ 39162879 (+) |
| G254926 | NA | non-coding | upstream | 114456 | 38978976 ~ 39057441 (+) |
| G254848 | NA | non-coding | upstream | 267627 | 38903746 ~ 38904270 (+) |
| G254814 | NA | non-coding | upstream | 309660 | 38861743 ~ 38862237 (+) |
| G254770 | NA | non-coding | upstream | 376840 | 38794789 ~ 38795057 (+) |
| G254870 | NA | non-coding | downstream | 41548 | 39255652 ~ 39256757 (+) |
| G255115 | NA | non-coding | downstream | 55514 | 39269618 ~ 39269965 (+) |
| G255195 | NA | non-coding | downstream | 194175 | 39408279 ~ 39410302 (+) |
| G255262 | NA | non-coding | downstream | 289427 | 39503531 ~ 39524024 (+) |
| G255344 | NA | non-coding | downstream | 432587 | 39646691 ~ 39646895 (+) |
| G254816 | NA | other | upstream | 327341 | 38843510 ~ 38844556 (+) |
| G254445 | NA | other | upstream | 571031 | 38600487 ~ 38600866 (+) |
| G254204 | NA | other | upstream | 730163 | 38441166 ~ 38441734 (+) |
| G253834 | LOC100136012 | other | upstream | 1079163 | 38092322 ~ 38092734 (+) |
| G253299 | NA | other | upstream | 1444559 | 37726948 ~ 37727338 (+) |
| LOC110519969 | LOC106586020 | other | downstream | 1225965 | 40440040 ~ 40452542 (+) |
| G261749 | NA | other | downstream | 5037965 | 44252069 ~ 44252551 (+) |
| G262037 | NA | other | downstream | 5306315 | 44520419 ~ 44525408 (+) |
| G263547 | LOC106586150 | other | downstream | 6624817 | 45838921 ~ 45839480 (+) |
| G254874 | NA | non-coding | downstream | 3322 | 39175765 ~ 39176166 (+) |
| G255075 | NA | non-coding | downstream | 5110 | 39177553 ~ 39177760 (+) |
| G255076 | NA | non-coding | downstream | 5753 | 39178196 ~ 39179017 (+) |
| G255082 | NA | non-coding | downstream | 15881 | 39188324 ~ 39189618 (+) |
| G255083 | NA | non-coding | downstream | 18034 | 39190477 ~ 39190825 (+) |
