Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118944668 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 40858297 ~ 40861180 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| reverse transcriptase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC118944668 | True | 998 | mRNA | 0.52 | 2 | 40858297 | 40861180 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| dnah7 | dnah7 | coding | upstream | 155619 | 40461161 ~ 40702678 (+) |
| LOC110519969 | LOC106586020 | coding | upstream | 405755 | 40440040 ~ 40452542 (+) |
| asmtl | asmtl | coding | upstream | 1075893 | 39769763 ~ 39782404 (+) |
| LOC110519965 | LOC106586023 | coding | upstream | 1088871 | 39745774 ~ 39769426 (+) |
| LOC110519964 | LOC106586025 | coding | upstream | 1116448 | 39713690 ~ 39741849 (+) |
| LOC110519971 | tmeff2 | coding | downstream | 693291 | 41554471 ~ 41725755 (+) |
| LOC110519972 | sdpr | coding | downstream | 878910 | 41740090 ~ 41767612 (+) |
| spegb | LOC106586064 | coding | downstream | 925773 | 41786953 ~ 41915322 (+) |
| LOC110519974 | LOC106586063 | coding | downstream | 1080919 | 41922501 ~ 41965278 (+) |
| LOC110519975 | LOC106586062 | coding | downstream | 1126075 | 41987255 ~ 42160686 (+) |
| G257303 | LOC106594194 | non-coding | upstream | 14458 | 40843610 ~ 40843839 (+) |
| G257299 | NA | non-coding | upstream | 15864 | 40842211 ~ 40842433 (+) |
| G257298 | NA | non-coding | upstream | 17022 | 40841041 ~ 40841275 (+) |
| G257271 | NA | non-coding | upstream | 34980 | 40822911 ~ 40823317 (+) |
| G257270 | NA | non-coding | upstream | 35509 | 40822578 ~ 40822788 (+) |
| G257435 | NA | non-coding | downstream | 84574 | 40945754 ~ 40946128 (+) |
| G257482 | NA | non-coding | downstream | 118551 | 40979731 ~ 40980095 (+) |
| G257624 | NA | non-coding | downstream | 313823 | 41175003 ~ 41252652 (+) |
| G257901 | NA | non-coding | downstream | 409248 | 41270428 ~ 41270633 (+) |
| G258000 | NA | non-coding | downstream | 517838 | 41379018 ~ 41379405 (+) |
| LOC110519960 | LOC106586058 | other | upstream | 1190209 | 39658753 ~ 39668297 (+) |
| G254816 | NA | other | upstream | 2013741 | 38843510 ~ 38844556 (+) |
| G254445 | NA | other | upstream | 2257431 | 38600487 ~ 38600866 (+) |
| G254204 | NA | other | upstream | 2416563 | 38441166 ~ 38441734 (+) |
| G261749 | NA | other | downstream | 3390889 | 44252069 ~ 44252551 (+) |
| G262037 | NA | other | downstream | 3659239 | 44520419 ~ 44525408 (+) |
| G263547 | LOC106586150 | other | downstream | 4977741 | 45838921 ~ 45839480 (+) |
| G263710 | NA | other | downstream | 5072939 | 45934119 ~ 45934418 (+) |
| G263733 | LOC106586158 | other | downstream | 5214304 | 46075484 ~ 46079425 (+) |
