Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110519972 |
| gene name | sdpr |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 41740090 ~ 41767612 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| serum deprivation-response protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021596901.2 | True | 4528 | mRNA | 0.48 | 2 | 41740090 | 41767612 |
41,728,000
41,732,000
41,736,000
41,740,000
41,744,000
41,748,000
41,752,000
41,756,000
41,756,000
41,760,000
41,764,000
41,768,000
41,772,000
41,776,000
41,780,000
41,784,000
NC_048567.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519971 | tmeff2 | coding | upstream | 14335 | 41554471 ~ 41725755 (+) |
| LOC118944668 | NA | coding | upstream | 878910 | 40858297 ~ 40861180 (+) |
| dnah7 | dnah7 | coding | upstream | 1037412 | 40461161 ~ 40702678 (+) |
| LOC110519969 | LOC106586020 | coding | upstream | 1287548 | 40440040 ~ 40452542 (+) |
| asmtl | asmtl | coding | upstream | 1957686 | 39769763 ~ 39782404 (+) |
| spegb | LOC106586064 | coding | downstream | 19341 | 41786953 ~ 41915322 (+) |
| LOC110519974 | LOC106586063 | coding | downstream | 174487 | 41922501 ~ 41965278 (+) |
| LOC110519975 | LOC106586062 | coding | downstream | 219643 | 41987255 ~ 42160686 (+) |
| LOC110519977 | csn8 | coding | downstream | 408269 | 42175881 ~ 42205548 (+) |
| LOC110519976 | LOC100194537 | coding | downstream | 428854 | 42196466 ~ 42198481 (+) |
| G258228 | NA | non-coding | upstream | 14044 | 41725782 ~ 41726046 (+) |
| G258303 | NA | non-coding | upstream | 36585 | 41631939 ~ 41703505 (+) |
| G258000 | NA | non-coding | upstream | 360685 | 41379018 ~ 41379405 (+) |
| G257901 | NA | non-coding | upstream | 469457 | 41270428 ~ 41270633 (+) |
| G257624 | NA | non-coding | upstream | 487438 | 41175003 ~ 41252652 (+) |
| G258395 | NA | non-coding | downstream | 11087 | 41778699 ~ 41778904 (+) |
| G258396 | NA | non-coding | downstream | 12563 | 41780175 ~ 41780484 (+) |
| G258443 | NA | non-coding | downstream | 77834 | 41845446 ~ 41845660 (+) |
| G258444 | NA | non-coding | downstream | 79470 | 41847082 ~ 41847372 (+) |
| G258445 | NA | non-coding | downstream | 81119 | 41848731 ~ 41848991 (+) |
| LOC110519960 | LOC106586058 | other | upstream | 2072002 | 39658753 ~ 39668297 (+) |
| G254816 | NA | other | upstream | 2895534 | 38843510 ~ 38844556 (+) |
| G254445 | NA | other | upstream | 3139224 | 38600487 ~ 38600866 (+) |
| G254204 | NA | other | upstream | 3298356 | 38441166 ~ 38441734 (+) |
| G261749 | NA | other | downstream | 2484457 | 44252069 ~ 44252551 (+) |
| G262037 | NA | other | downstream | 2752807 | 44520419 ~ 44525408 (+) |
| G263547 | LOC106586150 | other | downstream | 4071309 | 45838921 ~ 45839480 (+) |
| G263710 | NA | other | downstream | 4166507 | 45934119 ~ 45934418 (+) |
| G263733 | LOC106586158 | other | downstream | 4307872 | 46075484 ~ 46079425 (+) |
