LOC110519975 (LOC106586062)


Basic Information

Item Value
gene id LOC110519975
gene name LOC106586062
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 41987255 ~ 42160686 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021596908.2
GATTCCCCTTTGTCAGATTATGTGGGACACTGGTCTCTCCCACAATTTCTCTCTGTAACTAGCAGAGAGCCGCGCATCAGCTGTTCACGCCTTGGCAGTCGTGGTGGACCAGGGAAACTGGGAAAAGTTTTGAATTTATTTGGCCAGAAATCTTGTGGCCATTCAACTTGGTCACTACCAAAACAAAGATGAAAATGAGGTGTTCCTCATGGTTGGAGACACTAGTTTGCTCTGTCCTGGTTCTTCTGACCCCCGCAGCATCGCAATGGCCAGATGAGAGCAGCGTCTCCCTCCTGCAGCTGATCGGGGACCCTCCCCCGGCTGAGATCACCAAGGTCTATGGCCCCGACAACAGCCCCGGCTACGTGTTCGGTCCCGACGCTAACACGGGCCAGCTGGCACGCGCCCATCTTCCCAGCCCCTTTTATCGGgacttctccctcctcttcaaccTGAAGCCCCAGTCCACCAATGGTGGCGTTATCTTCTCGGTCACAGACCCCTTGCAGCAGATCATGTATGTGGGTGTCAAGCTGTCGCCCGTGAAGGCAAACCGGCAGAACGTAATCTTCTACTATACGGAGCCCGACTCGCAGGAGTCGTACGTGGCGGCCACCTTCCCCGTGCACAATCTGGCTGACCAGTGGAACCGCTTCTCCATCTCCGTGCTGGACGACAAGGTCACCTTCTACATCAACTGCGACGACCAGCCCCAGGTGGTGCGCTTTGAGAGGTCCCCAGACGAGATGGAGTTGGAGTCTGGAGCCGGGGTGTTTGTGGGCCAAGCTGGAGGGGCCGATCCCAATAAGTTCCTGGGGGTGATCGGGGAGCTGAGGGTCGTTGGAGACCCTCGGGCCGCTGAAAGACAGTGTGAAGAGGAAGGGGATGACTCGGATGCCGCTTCAGGAGACGACGGAAGCGGTGACGAAAGGATACCGGACGAGGAGAAGAAAGGATCGGGTACATCCATATGGGACGCAAAGATACGAAAATACGTGTTGGTTGAAGATGTCAGACTGACAGTTACGACTACTCCAACGTCATCACGCCCCATTCAACAGCCCCCGGTGACCCGGAAACAACCAGAGGTGTCTCCtaagaaagagagggACCAGGGTGGATCTAGAGGCGAGAAGGgcgacagaggagagaaaggagacagaGGTCCTATTGGTTCAAAGGGAGATTCTGGTTCCGAGTCAGGCACACGAGGAGGGGCACGTGGAGAGAAGGGAGTGCTTGGAGAAAAGGGAATGAAGGGAAAAGCAGGCTTTGGCTACCCCGGCTCGAAGGGTGACCCCGGCCCCGCTGGTCCCCCCGGACCACCCGGCCTCCCAGGGCCAGCAGCAGAGGTGGTATCACGTGGCGACGGCTCCGTGGTTCAGACGGTGGCAGGTCCAAGAGGACCAGCTGGGCCTGCTGGTGCCTCCGGCCCTGAGGGACCCGCAGGAGCTGACGGAGAGCCTGGTGATCCAGGTGAAGATGGATCTCAAGGCCCTGTTGGACCACCAGGCTTCCCTGGAATCCCAGGAGACCCCGGGCTCAAAGGAGAGAAGGGTGACCGTGGTGAGGGCCAGCCAGGCCCCAGGGGACCTCCAGGGCCCCCCGGACAACCAGCGCCAACCAGACACGACCGGCCGACCTTTGCAGACATGGAGGGCTCTGGGTTCCCTGACTTGGAGACACTTCGGGGACTGCCTGGTTTGCCTGGCCCTCCTGGCCTCCCCGGGGCCCCAGGTACCTCTGTTGTTGGGACAGGGGTCTCTGGCTTATTTGGCCCCAAAGGTCCCCCAGGACAGGATGGTGCTCCTGGTCAACCGGGTTTACACGGCCTGCCTGGTGCTGATGGTCGCCCAGGAGCTGCAGGGGCCAGGGGAGAGAAGGGTGATCCAGGTGAACTCGGTCTTCCAGGAGCAGTCGGAGCGAAGGGTGCACAGGGATTGAATGGCATTCCCGGGCAACCAGGACAGGGTGGATTGGCTGGCCTCCCTGGACCAATGGGACCACTGGGACAACCCGGGCCACCAGGACCCCCCGGACCAAGCTATCGTGTTGGTTTTGATGACATGGAAGGCTCTGGTGTGGGAGTGGCCAATGGAGTTCCTGGAGCCAGAGGACCAGAGGGGCAACAGGGTCCTCCTGGCATCCCTGGCCTACCAGGCAGGTCTGGTTTCCCTGGTATTCCTGGTGAGAAGGGAAGTGAAGGACCACAGGGAAGCGATGGCCGACCAGGGTTGGACGGTTTCCCTGGTCCTAATGGACAAAAGGGTGACAGCGGGGACAGAGGAGAAAGGGGCGAATCTGGTCGCGATGGAAACGGACAGCCTGGACCACCAGGCCCACCCGGCCCACCAGGACAAATCATCTACCAGACCTCCAGCAGTTATGATGGTGTCGTTGGAGGCGCCGGGCCCCAGGGCCAAGCTGGATTCCCTGGCCCGATTGGACCAAAGGGCGACATGGGAGATCCAGGCCAACCCAGTTATGGAGTCAAGGGCGAGAAGGGCGAGCCTGGCTCAATCATTGGGCCTGATGGGAATACTTTGTACCTGGGAAGATTGTCGGGTGAGAAGGGCGACAGAGGACCTGCCGGACCCGTCGGGCCCCCTGGGCAGTACGGTTCTCCTGGGATAAAGGGTGAATTTGGAATGCCCGGAAGACCTGGTCGTCCTGGTGTGAACGGATACAAGGGTGAAAAAGGAGAGCCATCCACAGGAGCTGGATTTAGCTACCCAGGTGTCCCAGGCCCACCCGGGCCGCCGGGACCACCCGGACCAGCTGTGCCCGTAGACCGCTTCAATGGATATGACACCTCAAGGAATTATCCAGtGACAAAAGGGGAGAAAGGTGATTTCGGAGCTCAAGGTCTCCCAGGAACGCCAGGTGTGGCCTCTAACTTCGACATTTTTACATTCAAGAATGACCTGAAAGGAGAGCGCGGCGATACAGGCGTGAAGGGGGAAAAAGGAGAGCCAAGTGGTGGCTATTATGACCCCCGTTTTGGAATACAACAAGGCCCGCCAGGACCCCCTGGAAACCCAGGACTTATGGGTCCAAAGGGAGATTCCATCACGGGCCCCCCTGGTCCACAGGGCCCACCAGGCTCCCCAGGGATTGGCTACGACGGTCGTCCAGGAAACCCAGGCCCACCAGGTCCTCCCGGGCCCACAGGGTCCCACTCACTACCAGGGGCCTACAGACCTACCCACCCCATTAGTATTCCTGGCCCCCCCGGACCTGCTGGACCACCTGGaatacctggtcacacctcaGGGGTGACAGTTTTGAGGTCATACGACACCATGATTGCTACTGCAAGGCGCCAGTCGGAGGGCACGCTCATCTACATTGTCGACAAAACAGATCTCTACATCCGGGTCCGCAATGGATTCAGACAAATCATGCTCAGTGACTACAGTCCCTTCTACAGAGATCTGGACAACGAAGTAGCGGCAGTCCAGCCTCCCCCTGTCGTCAATTACCCCCAATCCCAGGACCACTCGGCCAACAATGGAGCTGAACAATTCTCCCAAGGCGGCGCTGCCACCCACCCCATCGTGCCTCCTCCTCGCCAGCCTATTGAGATACCCAGGCCCGCCCAACCCAACAATCGCGACCCCAGAGACCCCCCTCAGTATGATCACAGATACCCCTCTCAGACTGACCCTAGGTACCCCCCTCAGACAGATGGCCGCTACAGCCCTGTGCAGCCTGAGAACAGGTATCCCACCCAGCCCGAAAGACGATATCACATCACCCCCCAGAGACAACCTGTTCCCCCTCCAGTTCCCCAGCCTGCCGGTCACATCCACACATCAGGGCCAGGACTCCACCTGATCGCCCTGAACACTCCCCAAGTGGGCAACATGCGTGGTATTCGAGGGGCAGACTTCCTGTGTTTCCAGCAAGCTCGTGCAGTGGGCCTGAAGGGCACCTTCAGAGCTTTCTTGTCCTCCAAGCTCCAGGACCTCTACAGCATCGTTCGCAAGTCCGACAGAGACAGCCTCCCCATCTTAAACCTCAAGGACCATGTGCTATTTAATAGCTGGGAGTCATTGTTCAGTAAgactgaggggaggatggaggaaaaTGCACCAATCTACTCCTTTGACGGCAGAGATATCCTCAGGGACAGTGCATGGCCAGAGAAAATGGTCTGGCACGGCTCTAGCAGCGAGGGTCACCGCCAGACAGATAACTACTGCGAGACATGGAGGGCAGGAGACCGTGCAGTGACTGGCCTAGCGTCTTCACTGCAGACCGGCCAGCTCCTACAACAGTTGCCCAGTAGCTGCTCTAGCTCCTACATAGTGCTGTGTATCGAGAACAGCTATCTCTCTCATtccaaaaaataagaaaaaacctGTCCCTGTTTCTTTGGTCCTAGTAAACGCAATACAATTATCCAAATAGGCTCATTCCTCCCTCCCGCGCCTCCAAAACATGACGTCCTACAAACTAGTTCTGCAGCTCTTGCCTGGCAGAGAAGCTCGCCATTGTCTTCTTCATCCCTTCCATAATGCCAAAGAGACGGGTCGAACATAGAGGTGTTTGTCCTTTTCTCGGGGCATTGGCACATATTTTCCAAGGGGTTGAACAAGAGAAGAGAAGCTAACTGCGGCAGCATTTTTTTATTGTatccattaaaaaatatatattgtatatgatatctgtgttttatttttatttctgtttttatcaaTGTTACTTTTTAAACTGTCTTCAAATTTGGTGTATTCAATTAGCTATACATTTTCTTTGTAccgttttccacatttttgttttattttcatttcatTTAAGGCTTGTGGTTTACTAAGGGGGTAACCTTTTAAATAATATTTTAAAATTAAAGAAGAGAATAGTTATTTATTTTGAAATGAAGTTATGTGAGAGCATACGATATGATTTGGAAAAG
>XM_021596906.2
TGTGGTGACTCTGCAGAGCACTGGAGGAGAACGGTGCATGTGGAGTGAATCAGTGGCTGTGGGCAAGTCACAGTTCACTCTGGGAGCTTGATCAACGCTGCTGGTGGAGTACTAGTGGGCAGCAGCAGGATGGATTGCAAGATTGGATTCCAGCTGGGTGTCTCTTTTTTACTGGTACTCTTGGTGGGTCATAGTGAGGCGTTGTGGTTTTCCTGGAGCAGTACAGACGGCACCACTGAGGCCCCAACGCTGGACAATGAGGGATCTGGGAACCCTGTGGCTAGCGGGAAATCACCAAAGCCGGACAACGTTGGAGAAGATGGGGCAGAGATCATTGACGTAGCTAGTGGGAAACGTAAGTTTGTACAAACTTGGGACCAGCATTCGAAGGCCACGGAGACCCACAAGCTGACCACTGTGGGGTCACAAGCCAGGAATGAGCGCCCAATTGAAAAGGATTCCCATGGGTCCACGTCGAGGGGAAGTAAACCTGATGAGAGCAGCGTCTCCCTCCTGCAGCTGATCGGGGACCCTCCCCCGGCTGAGATCACCAAGGTCTATGGCCCCGACAACAGCCCCGGCTACGTGTTCGGTCCCGACGCTAACACGGGCCAGCTGGCACGCGCCCATCTTCCCAGCCCCTTTTATCGGgacttctccctcctcttcaaccTGAAGCCCCAGTCCACCAATGGTGGCGTTATCTTCTCGGTCACAGACCCCTTGCAGCAGATCATGTATGTGGGTGTCAAGCTGTCGCCCGTGAAGGCAAACCGGCAGAACGTAATCTTCTACTATACGGAGCCCGACTCGCAGGAGTCGTACGTGGCGGCCACCTTCCCCGTGCACAATCTGGCTGACCAGTGGAACCGCTTCTCCATCTCCGTGCTGGACGACAAGGTCACCTTCTACATCAACTGCGACGACCAGCCCCAGGTGGTGCGCTTTGAGAGGTCCCCAGACGAGATGGAGTTGGAGTCTGGAGCCGGGGTGTTTGTGGGCCAAGCTGGAGGGGCCGATCCCAATAAGTTCCTGGGGGTGATCGGGGAGCTGAGGGTCGTTGGAGACCCTCGGGCCGCTGAAAGACAGTGTGAAGAGGAAGGGGATGACTCGGATGCCGCTTCAGGAGACGACGGAAGCGGTGACGAAAGGATACCGGACGAGGAGAAGAAAGGATCGGGTACATCCATATGGGACGCAAAGATACGAAAATACGTGTTGGTTGAAGATGTCAGACTGACAGTTACGACTACTCCAACGTCATCACGCCCCATTCAACAGCCCCCGGTGACCCGGAAACAACCAGAGGTGTCTCCtaagaaagagagggACCAGGGTGGATCTAGAGGCGAGAAGGgcgacagaggagagaaaggagacagaGGTCCTATTGGTTCAAAGGGAGATTCTGGTTCCGAGTCAGGCACACGAGGAGGGGCACGTGGAGAGAAGGGAGTGCTTGGAGAAAAGGGAATGAAGGGAAAAGCAGGCTTTGGCTACCCCGGCTCGAAGGGTGACCCCGGCCCCGCTGGTCCCCCCGGACCACCCGGCCTCCCAGGGCCAGCAGCAGAGGTGGTATCACGTGGCGACGGCTCCGTGGTTCAGACGGTGGCAGGTCCAAGAGGACCAGCTGGGCCTGCTGGTGCCTCCGGCCCTGAGGGACCCGCAGGAGCTGACGGAGAGCCTGGTGATCCAGGTGAAGATGGATCTCAAGGCCCTGTTGGACCACCAGGCTTCCCTGGAATCCCAGGAGACCCCGGGCTCAAAGGAGAGAAGGGTGACCGTGGTGAGGGCCAGCCAGGCCCCAGGGGACCTCCAGGGCCCCCCGGACAACCAGCGCCAACCAGACACGACCGGCCGACCTTTGCAGACATGGAGGGCTCTGGGTTCCCTGACTTGGAGACACTTCGGGGACTGCCTGGTTTGCCTGGCCCTCCTGGCCTCCCCGGGGCCCCAGGTACCTCTGTTGTTGGGACAGGGGTCTCTGGCTTATTTGGCCCCAAAGGTCCCCCAGGACAGGATGGTGCTCCTGGTCAACCGGGTTTACACGGCCTGCCTGGTGCTGATGGTCGCCCAGGAGCTGCAGGGGCCAGGGGAGAGAAGGGTGATCCAGGTGAACTCGGTCTTCCAGGAGCAGTCGGAGCGAAGGGTGCACAGGGATTGAATGGCATTCCCGGGCAACCAGGACAGGGTGGATTGGCTGGCCTCCCTGGACCAATGGGACCACTGGGACAACCCGGGCCACCAGGACCCCCCGGACCAAGCTATCGTGTTGGTTTTGATGACATGGAAGGCTCTGGTGTGGGAGTGGCCAATGGAGTTCCTGGAGCCAGAGGACCAGAGGGGCAACAGGGTCCTCCTGGCATCCCTGGCCTACCAGGCAGGTCTGGTTTCCCTGGTATTCCTGGTGAGAAGGGAAGTGAAGGACCACAGGGAAGCGATGGCCGACCAGGGTTGGACGGTTTCCCTGGTCCTAATGGACAAAAGGGTGACAGCGGGGACAGAGGAGAAAGGGGCGAATCTGGTCGCGATGGAAACGGACAGCCTGGACCACCAGGCCCACCCGGCCCACCAGGACAAATCATCTACCAGACCTCCAGCAGTTATGATGGTGTCGTTGGAGGCGCCGGGCCCCAGGGCCAAGCTGGATTCCCTGGCCCGATTGGACCAAAGGGCGACATGGGAGATCCAGGCCAACCCAGTTATGGAGTCAAGGGCGAGAAGGGCGAGCCTGGCTCAATCATTGGGCCTGATGGGAATACTTTGTACCTGGGAAGATTGTCGGGTGAGAAGGGCGACAGAGGACCTGCCGGACCCGTCGGGCCCCCTGGGCAGTACGGTTCTCCTGGGATAAAGGGTGAATTTGGAATGCCCGGAAGACCTGGTCGTCCTGGTGTGAACGGATACAAGGGTGAAAAAGGAGAGCCATCCACAGGAGCTGGATTTAGCTACCCAGGTGTCCCAGGCCCACCCGGGCCGCCGGGACCACCCGGACCAGCTGTGCCCGTAGACCGCTTCAATGGATATGACACCTCAAGGAATTATCCAGtGACAAAAGGGGAGAAAGGTGATTTCGGAGCTCAAGGTCTCCCAGGAACGCCAGGTGTGGCCTCTAACTTCGACATTTTTACATTCAAGAATGACCTGAAAGGAGAGCGCGGCGATACAGGCGTGAAGGGGGAAAAAGGAGAGCCAAGTGGTGGCTATTATGACCCCCGTTTTGGAATACAACAAGGCCCGCCAGGACCCCCTGGAAACCCAGGACTTATGGGTCCAAAGGGAGATTCCATCACGGGCCCCCCTGGTCCACAGGGCCCACCAGGCTCCCCAGGGATTGGCTACGACGGTCGTCCAGGAAACCCAGGCCCACCAGGTCCTCCCGGGCCCACAGGGTCCCACTCACTACCAGGGGCCTACAGACCTACCCACCCCATTAGTATTCCTGGCCCCCCCGGACCTGCTGGACCACCTGGaatacctggtcacacctcaGGGGTGACAGTTTTGAGGTCATACGACACCATGATTGCTACTGCAAGGCGCCAGTCGGAGGGCACGCTCATCTACATTGTCGACAAAACAGATCTCTACATCCGGGTCCGCAATGGATTCAGACAAATCATGCTCAGTGACTACAGTCCCTTCTACAGAGATCTGGACAACGAAGTAGCGGCAGTCCAGCCTCCCCCTGTCGTCAATTACCCCCAATCCCAGGACCACTCGGCCAACAATGGAGCTGAACAATTCTCCCAAGGCGGCGCTGCCACCCACCCCATCGTGCCTCCTCCTCGCCAGCCTATTGAGATACCCAGGCCCGCCCAACCCAACAATCGCGACCCCAGAGACCCCCCTCAGTATGATCACAGATACCCCTCTCAGACTGACCCTAGGTACCCCCCTCAGACAGATGGCCGCTACAGCCCTGTGCAGCCTGAGAACAGGTATCCCACCCAGCCCGAAAGACGATATCACATCACCCCCCAGAGACAACCTGTTCCCCCTCCAGTTCCCCAGCCTGCCGGTCACATCCACACATCAGGGCCAGGACTCCACCTGATCGCCCTGAACACTCCCCAAGTGGGCAACATGCGTGGTATTCGAGGGGCAGACTTCCTGTGTTTCCAGCAAGCTCGTGCAGTGGGCCTGAAGGGCACCTTCAGAGCTTTCTTGTCCTCCAAGCTCCAGGACCTCTACAGCATCGTTCGCAAGTCCGACAGAGACAGCCTCCCCATCTTAAACCTCAAGGACCATGTGCTATTTAATAGCTGGGAGTCATTGTTCAGTAAgactgaggggaggatggaggaaaaTGCACCAATCTACTCCTTTGACGGCAGAGATATCCTCAGGGACAGTGCATGGCCAGAGAAAATGGTCTGGCACGGCTCTAGCAGCGAGGGTCACCGCCAGACAGATAACTACTGCGAGACATGGAGGGCAGGAGACCGTGCAGTGACTGGCCTAGCGTCTTCACTGCAGACCGGCCAGCTCCTACAACAGTTGCCCAGTAGCTGCTCTAGCTCCTACATAGTGCTGTGTATCGAGAACAGCTATCTCTCTCATtccaaaaaataagaaaaaacctGTCCCTGTTTCTTTGGTCCTAGTAAACGCAATACAATTATCCAAATAGGCTCATTCCTCCCTCCCGCGCCTCCAAAACATGACGTCCTACAAACTAGTTCTGCAGCTCTTGCCTGGCAGAGAAGCTCGCCATTGTCTTCTTCATCCCTTCCATAATGCCAAAGAGACGGGTCGAACATAGAGGTGTTTGTCCTTTTCTCGGGGCATTGGCACATATTTTCCAAGGGGTTGAACAAGAGAAGAGAAGCTAACTGCGGCAGCATTTTTTTATTGTatccattaaaaaatatatattgtatatgatatctgtgttttatttttatttctgtttttatcaaTGTTACTTTTTAAACTGTCTTCAAATTTGGTGTATTCAATTAGCTATACATTTTCTTTGTAccgttttccacatttttgttttattttcatttcatTTAAGGCTTGTGGTTTACTAAGGGGGTAACCTTTTAAATAATATTTTAAAATTAAAGAAGAGAATAGTTATTTATTTTGAAATGAAGTTATGTGAGAGCATACGATATGATTTGGAAAAG
>XM_021596907.2
TGTGGTGACTCTGCAGAGCACTGGAGGAGAACGGTGCATGTGGAGTGAATCAGTGGCTGTGGGCAAGTCACAGTTCACTCTGGGAGCTTGATCAACGCTGCTGGTGGAGTACTAGTGGGCAGCAGCAGGATGGATTGCAAGATTGGATTCCAGCTGGGTGTCTCTTTTTTACTGGTACTCTTGGTGGGTCATAGTGAGGCGTTGTGGTTTTCCTGGAGCAGTACAGACGGCACCACTGAGGCCCCAACGCTGGACAATGAGGGATCTGGGAACCCTGTGGCTAGCGGGAAATCACCAAAGCCGGACAACGTTGGAGAAGATGGGGCAGAGATCATTGACGTAGCTAGTGGGAAACATGAGAGCAGCGTCTCCCTCCTGCAGCTGATCGGGGACCCTCCCCCGGCTGAGATCACCAAGGTCTATGGCCCCGACAACAGCCCCGGCTACGTGTTCGGTCCCGACGCTAACACGGGCCAGCTGGCACGCGCCCATCTTCCCAGCCCCTTTTATCGGgacttctccctcctcttcaaccTGAAGCCCCAGTCCACCAATGGTGGCGTTATCTTCTCGGTCACAGACCCCTTGCAGCAGATCATGTATGTGGGTGTCAAGCTGTCGCCCGTGAAGGCAAACCGGCAGAACGTAATCTTCTACTATACGGAGCCCGACTCGCAGGAGTCGTACGTGGCGGCCACCTTCCCCGTGCACAATCTGGCTGACCAGTGGAACCGCTTCTCCATCTCCGTGCTGGACGACAAGGTCACCTTCTACATCAACTGCGACGACCAGCCCCAGGTGGTGCGCTTTGAGAGGTCCCCAGACGAGATGGAGTTGGAGTCTGGAGCCGGGGTGTTTGTGGGCCAAGCTGGAGGGGCCGATCCCAATAAGTTCCTGGGGGTGATCGGGGAGCTGAGGGTCGTTGGAGACCCTCGGGCCGCTGAAAGACAGTGTGAAGAGGAAGGGGATGACTCGGATGCCGCTTCAGGAGACGACGGAAGCGGTGACGAAAGGATACCGGACGAGGAGAAGAAAGGATCGGGTACATCCATATGGGACGCAAAGATACGAAAATACGTGTTGGTTGAAGATGTCAGACTGACAGTTACGACTACTCCAACGTCATCACGCCCCATTCAACAGCCCCCGGTGACCCGGAAACAACCAGAGGTGTCTCCtaagaaagagagggACCAGGGTGGATCTAGAGGCGAGAAGGgcgacagaggagagaaaggagacagaGGTCCTATTGGTTCAAAGGGAGATTCTGGTTCCGAGTCAGGCACACGAGGAGGGGCACGTGGAGAGAAGGGAGTGCTTGGAGAAAAGGGAATGAAGGGAAAAGCAGGCTTTGGCTACCCCGGCTCGAAGGGTGACCCCGGCCCCGCTGGTCCCCCCGGACCACCCGGCCTCCCAGGGCCAGCAGCAGAGGTGGTATCACGTGGCGACGGCTCCGTGGTTCAGACGGTGGCAGGTCCAAGAGGACCAGCTGGGCCTGCTGGTGCCTCCGGCCCTGAGGGACCCGCAGGAGCTGACGGAGAGCCTGGTGATCCAGGTGAAGATGGATCTCAAGGCCCTGTTGGACCACCAGGCTTCCCTGGAATCCCAGGAGACCCCGGGCTCAAAGGAGAGAAGGGTGACCGTGGTGAGGGCCAGCCAGGCCCCAGGGGACCTCCAGGGCCCCCCGGACAACCAGCGCCAACCAGACACGACCGGCCGACCTTTGCAGACATGGAGGGCTCTGGGTTCCCTGACTTGGAGACACTTCGGGGACTGCCTGGTTTGCCTGGCCCTCCTGGCCTCCCCGGGGCCCCAGGTACCTCTGTTGTTGGGACAGGGGTCTCTGGCTTATTTGGCCCCAAAGGTCCCCCAGGACAGGATGGTGCTCCTGGTCAACCGGGTTTACACGGCCTGCCTGGTGCTGATGGTCGCCCAGGAGCTGCAGGGGCCAGGGGAGAGAAGGGTGATCCAGGTGAACTCGGTCTTCCAGGAGCAGTCGGAGCGAAGGGTGCACAGGGATTGAATGGCATTCCCGGGCAACCAGGACAGGGTGGATTGGCTGGCCTCCCTGGACCAATGGGACCACTGGGACAACCCGGGCCACCAGGACCCCCCGGACCAAGCTATCGTGTTGGTTTTGATGACATGGAAGGCTCTGGTGTGGGAGTGGCCAATGGAGTTCCTGGAGCCAGAGGACCAGAGGGGCAACAGGGTCCTCCTGGCATCCCTGGCCTACCAGGCAGGTCTGGTTTCCCTGGTATTCCTGGTGAGAAGGGAAGTGAAGGACCACAGGGAAGCGATGGCCGACCAGGGTTGGACGGTTTCCCTGGTCCTAATGGACAAAAGGGTGACAGCGGGGACAGAGGAGAAAGGGGCGAATCTGGTCGCGATGGAAACGGACAGCCTGGACCACCAGGCCCACCCGGCCCACCAGGACAAATCATCTACCAGACCTCCAGCAGTTATGATGGTGTCGTTGGAGGCGCCGGGCCCCAGGGCCAAGCTGGATTCCCTGGCCCGATTGGACCAAAGGGCGACATGGGAGATCCAGGCCAACCCAGTTATGGAGTCAAGGGCGAGAAGGGCGAGCCTGGCTCAATCATTGGGCCTGATGGGAATACTTTGTACCTGGGAAGATTGTCGGGTGAGAAGGGCGACAGAGGACCTGCCGGACCCGTCGGGCCCCCTGGGCAGTACGGTTCTCCTGGGATAAAGGGTGAATTTGGAATGCCCGGAAGACCTGGTCGTCCTGGTGTGAACGGATACAAGGGTGAAAAAGGAGAGCCATCCACAGGAGCTGGATTTAGCTACCCAGGTGTCCCAGGCCCACCCGGGCCGCCGGGACCACCCGGACCAGCTGTGCCCGTAGACCGCTTCAATGGATATGACACCTCAAGGAATTATCCAGtGACAAAAGGGGAGAAAGGTGATTTCGGAGCTCAAGGTCTCCCAGGAACGCCAGGTGTGGCCTCTAACTTCGACATTTTTACATTCAAGAATGACCTGAAAGGAGAGCGCGGCGATACAGGCGTGAAGGGGGAAAAAGGAGAGCCAAGTGGTGGCTATTATGACCCCCGTTTTGGAATACAACAAGGCCCGCCAGGACCCCCTGGAAACCCAGGACTTATGGGTCCAAAGGGAGATTCCATCACGGGCCCCCCTGGTCCACAGGGCCCACCAGGCTCCCCAGGGATTGGCTACGACGGTCGTCCAGGAAACCCAGGCCCACCAGGTCCTCCCGGGCCCACAGGGTCCCACTCACTACCAGGGGCCTACAGACCTACCCACCCCATTAGTATTCCTGGCCCCCCCGGACCTGCTGGACCACCTGGaatacctggtcacacctcaGGGGTGACAGTTTTGAGGTCATACGACACCATGATTGCTACTGCAAGGCGCCAGTCGGAGGGCACGCTCATCTACATTGTCGACAAAACAGATCTCTACATCCGGGTCCGCAATGGATTCAGACAAATCATGCTCAGTGACTACAGTCCCTTCTACAGAGATCTGGACAACGAAGTAGCGGCAGTCCAGCCTCCCCCTGTCGTCAATTACCCCCAATCCCAGGACCACTCGGCCAACAATGGAGCTGAACAATTCTCCCAAGGCGGCGCTGCCACCCACCCCATCGTGCCTCCTCCTCGCCAGCCTATTGAGATACCCAGGCCCGCCCAACCCAACAATCGCGACCCCAGAGACCCCCCTCAGTATGATCACAGATACCCCTCTCAGACTGACCCTAGGTACCCCCCTCAGACAGATGGCCGCTACAGCCCTGTGCAGCCTGAGAACAGGTATCCCACCCAGCCCGAAAGACGATATCACATCACCCCCCAGAGACAACCTGTTCCCCCTCCAGTTCCCCAGCCTGCCGGTCACATCCACACATCAGGGCCAGGACTCCACCTGATCGCCCTGAACACTCCCCAAGTGGGCAACATGCGTGGTATTCGAGGGGCAGACTTCCTGTGTTTCCAGCAAGCTCGTGCAGTGGGCCTGAAGGGCACCTTCAGAGCTTTCTTGTCCTCCAAGCTCCAGGACCTCTACAGCATCGTTCGCAAGTCCGACAGAGACAGCCTCCCCATCTTAAACCTCAAGGACCATGTGCTATTTAATAGCTGGGAGTCATTGTTCAGTAAgactgaggggaggatggaggaaaaTGCACCAATCTACTCCTTTGACGGCAGAGATATCCTCAGGGACAGTGCATGGCCAGAGAAAATGGTCTGGCACGGCTCTAGCAGCGAGGGTCACCGCCAGACAGATAACTACTGCGAGACATGGAGGGCAGGAGACCGTGCAGTGACTGGCCTAGCGTCTTCACTGCAGACCGGCCAGCTCCTACAACAGTTGCCCAGTAGCTGCTCTAGCTCCTACATAGTGCTGTGTATCGAGAACAGCTATCTCTCTCATtccaaaaaataagaaaaaacctGTCCCTGTTTCTTTGGTCCTAGTAAACGCAATACAATTATCCAAATAGGCTCATTCCTCCCTCCCGCGCCTCCAAAACATGACGTCCTACAAACTAGTTCTGCAGCTCTTGCCTGGCAGAGAAGCTCGCCATTGTCTTCTTCATCCCTTCCATAATGCCAAAGAGACGGGTCGAACATAGAGGTGTTTGTCCTTTTCTCGGGGCATTGGCACATATTTTCCAAGGGGTTGAACAAGAGAAGAGAAGCTAACTGCGGCAGCATTTTTTTATTGTatccattaaaaaatatatattgtatatgatatctgtgttttatttttatttctgtttttatcaaTGTTACTTTTTAAACTGTCTTCAAATTTGGTGTATTCAATTAGCTATACATTTTCTTTGTAccgttttccacatttttgttttattttcatttcatTTAAGGCTTGTGGTTTACTAAGGGGGTAACCTTTTAAATAATATTTTAAAATTAAAGAAGAGAATAGTTATTTATTTTGAAATGAAGTTATGTGAGAGCATACGATATGATTTGGAAAAG

Function

NR:

description
collagen alpha-1(XVIII) chain-like isoform X2

GO: NA

KEGG:

id description
K06823 COL18A; collagen type XVIII alpha

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021596908.2 False 4918 mRNA 0.56 43 41987255 42160686
XM_021596906.2 False 5138 mRNA 0.56 42 42063844 42160686
XM_021596907.2 True 5000 mRNA 0.56 42 42063844 42160686

Neighbor

gene id symbol gene type direction distance location
LOC110519974 LOC106586063 coding upstream 22014 41922501 ~ 41965278 (+)
spegb LOC106586064 coding upstream 71933 41786953 ~ 41915322 (+)
LOC110519972 sdpr coding upstream 219643 41740090 ~ 41767612 (+)
LOC110519971 tmeff2 coding upstream 261500 41554471 ~ 41725755 (+)
LOC118944668 NA coding upstream 1126075 40858297 ~ 40861180 (+)
LOC110519977 csn8 coding downstream 15195 42175881 ~ 42205548 (+)
LOC110519976 LOC100194537 coding downstream 35780 42196466 ~ 42198481 (+)
LOC110519988 LOC106586103 coding downstream 300851 42461537 ~ 42534154 (+)
LOC110519991 cssa25h2orf47 coding downstream 382935 42543621 ~ 42550621 (+)
pgap1 pgap1 coding downstream 401454 42562140 ~ 42590366 (+)
G258447 NA non-coding upstream 137024 41850004 ~ 41850231 (+)
G258446 LOC106608106 non-coding upstream 137492 41849351 ~ 41849763 (+)
G258445 NA non-coding upstream 138264 41848731 ~ 41848991 (+)
G258444 NA non-coding upstream 139883 41847082 ~ 41847372 (+)
G258650 NA non-coding downstream 66980 42227666 ~ 42227968 (+)
G258657 NA non-coding downstream 72419 42233105 ~ 42233311 (+)
G258664 NA non-coding downstream 81177 42241863 ~ 42242082 (+)
G258682 NA non-coding downstream 163785 42324471 ~ 42327172 (+)
G258784 NA non-coding downstream 283178 42443864 ~ 42444118 (+)
LOC110519969 LOC106586020 other upstream 1535075 40440040 ~ 40452542 (+)
LOC110519960 LOC106586058 other upstream 2319167 39658753 ~ 39668297 (+)
G254816 NA other upstream 3142699 38843510 ~ 38844556 (+)
G254445 NA other upstream 3386389 38600487 ~ 38600866 (+)
G254204 NA other upstream 3545521 38441166 ~ 38441734 (+)
G261749 NA other downstream 2091383 44252069 ~ 44252551 (+)
G262037 NA other downstream 2359733 44520419 ~ 44525408 (+)
G263547 LOC106586150 other downstream 3678235 45838921 ~ 45839480 (+)
G263710 NA other downstream 3773433 45934119 ~ 45934418 (+)
G263733 LOC106586158 other downstream 3914798 46075484 ~ 46079425 (+)

Expression


Co-expression Network