LOC110519993 (LOC106586116)


Basic Information

Item Value
gene id LOC110519993
gene name LOC106586116
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 43521331 ~ 43626170 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021596933.2
ATGGCGATGACCAACTTAGACTTGgatgTGCCGGATTTTGGGCCAGACAGGAACTGGAAAGGTATCGCCATCTCTCTGCTGGTCATCATGGTCATACTGTCACTCATTGGACTGGCCATCGTTCTTCTTTCCAAAAATGATGGCGCGAAGTCTTTAGGCACCCAATTGACACTGGATGACCTCTTTCAACGAGAGTTCCAGGTGCATGACCCTGATGCTAAGTGGATCAATGatgAGGAGATAATTTTCAGGAGCTGGGACGGTGATGTGTTCAAAGCCAACACGCATAGCAATGAGACAGACCTCTTACTAAAAAACACCACTTTTGCAACATTTAAGGCCTCCAAGTTTGCAGTTTCTCCAGATCTAAACTTCGTTCTTCTGGGCTATGACGTGAAACAGGTGTACCGGTACTCTTTCCTGGCATCCTACTTGATATACAACCTGCATACAAGGGAGGTACAGGAGCTGAACCCTCCAGAGGTGTCGGACTCGGTCCTGCAGTTTGCTTCCTGGGGCGTTCGGGATCAACAGCTGGTGTATGTCTTTGAAAACAACATTTACTACCAGACGGATGTCAAAAGCAGTTCTTGGAGACTGACGTCTTCAGGACAAGAAGGAGTGGTCTTCAATGGCATCGCTGATTGGTTATATGAAGAGGAAGTGCTGCACTCTCAAGTGGCACACTGGTGGTCCCCTGACGGGTCACGACTggcctacctcaacctcaacgaCACTCTGGTACCCAACATGCTCCTGCCTCGCTTCACTGGCGCCCTCTACCCCAGGGGCCAACTGTACCCTTACCCCAAGGTAGGGCAGGTCAATCCCACAGTTAAGCTTTACGTCGTCACCTTGGATGGGGGATCCCAGACAACTGAACTGCGACCTCCCAACAGCTTTGAAAAAAGTGACTACTACATAACCATGGTGAAATGGGTCACAGAGGAGAAGATTGGTGTGCGCTGGTTGAACCGAGCCCAGAACACCTCCATCCTGTCGCTATGTGAGGTCACTATGGGGGCATGTCTAAAAAAACATGTGATTACATCAGAGAAGTGGCTTGATCGTCAGAATGAAGAGCCATTGTTTTCCAAGGATGGGAATACCTTCTTCCTGACCATGCCAATAAAACATGGCGGACGAGGGTCATTCCACCATATCACCATGATATCTGACCAGTTCAATGGTGATGAGGTCAACATGCGCCACCTGACCTCTGGCAGCTGGGAGGTGTCTCAGATCCTGGAGTATGATGAGGAAGCAGATACAGTTTATTTCCTTAGCACAGAAGATAGTTCAATACAAAGACAACTGTACAGGGTGTCGGCGGTAAACCCATTTCAACGTGAATGCCTGACCTGCTCCCTGTTCAAAACACAATGCTCTTACTACGATGCAGTCTTCAACCAAGACTATCAATATGTCCTGCTGAACTGTAGAGGTCCTGGTATACCAAGAACCACCCTTTACAAACTGAATGACATGAGCAAGAATGACACTTTGGAGAAGAACACTGCACTAAGAGATGCACTGATATATAGGAATATACCAAGGAGAGATATCAGGACCCTACAAATCAACAACTTTGCACTTCGTCTGGAGCTGACCTTGCCAATAGATTTTGATGAGGCCACAGCGCATCCACTTCTGCTGATCCTTGACAGTGCCCCCGGTGGCCAGGCGGTGAGTGACCAGTTTGTTCTTGACTGGGACTCTGTTCTGGTCAGCTCAGATAACGTCATTGTGGCTCGCCTGGACGGCAGTGGGAGTGGGTTCCTGGGCCAGCGGGTCCTACATGAAGTCCACCAGCGTTTGGGAACTGTGGAGGTGCAGGACCAGATCGCAGCAGTAGAGTACCTGACCAAGCTGCCATATGTGGATAAAAATAAAGTTGCTGTTTATGGAAAGGCTTATGGGGGTTTCCTGAGCTCtcttctactcctctcctctggctCCATGTTCAGATGTGGGGTTGCAGTTGCTCCCGTGACAGACTGGAGACTCTACGGTTCGGCCTTCACTGAGCGTTACTTTGGGTTTCCAGTCCAGGATGAGCGTAAATACCAACTCTCCAGTCTGCTTCCCAACATCACAGGCACAGGTCAACGGAAGTTTCTCATCATCCATGGAACAGCAGATGCCACCGTTCATTTCCAGCATTCCGCGGAGCTGGTGAAACTTCTGTCAATATCAAATGTTAACTACACTCTGCAGATCTTCCCGGACGAAGGCCACAACATTTACTCTGTGAAGAGCCAACGCTACTTGTTGAACTCTGTCATGACCTTCTTCAGGGAATGCTTCCTAGTGGAAATCCCTGTAGCTCATCCTGTGTCTGAGGATGACTAGGATGACCATATCTCACCTTGTTTTTGTAGAACCTGTTGCTCCTGGAAACGAGAAAGTGGTCTATGACCTGCTTGTCTGAGGAACCACCAGTGAGAAGTGGTGAGGTATGGTGAGACAAAGTGAATGAGAGAGGGGTCAGACAATGTTGTTGTGCTCTATGAAGGGTAATGATAGGCTGAGATGAGATTGAAGATTTTTCCTGTACAGTGATAATTTTTCCTATTGCTATGATCACACAATAGTTCACATAGAAACATTTTTGGGTATTACCAGTGTTCTGCAAATATCATAAGTATACAGTTAGCGTGGTAGAGTTTCAGTAGAGAAGAAGGGAAACTTCATATTAGCTGTTTGTATGGGAGATATGTTTTTGTCTTTACTGTTAAAGATGTGAAGggagatatttatttatttttccttttaaAGAATATAGTTATTTCAGACAGCTGTAATGTATTGTGAATTTTATACCTAGATACATATTCAATTCTAATATGGCATTTAAGCAGGCGCtttttatccaaagcaatttaCAGAGTATGCATTAGGGACAAATACAGGTAAACGGGATCCTTGGACTTCACTCTTCACatttcccccccaaaataaaaTGACCTGGGAAATTAAAACATTTCCCCCAATATTGCACTAATGCAATTTTACAAAATACACAATCCTTGCAGAAGCAAATTGGCAAACATTTTATATATAGCACATTATCCAATCAGGTTATCGCATGGAAGCCTTTAGTCTAGAGAATTTACTTCACACAAAGTCACAATAAATTCAAAGCACACACAAAATTGACACTGCTGGACCGCAGACAATACTTAAATACAGTTTAGAGTTCTCATCAGAACTGAATATTCTAAAATGAGCccgaacccccccaaaaaaatccagataaaaaaaacaacaactatagGCTATATTGATTTAAAATGGTGTTGAGTACAACGTGGCGGTTGGGGTCCTTGCAGAGGAGTGAGTGGATGAGGAAACAGCCATTGGGACTAGAAAAAGCACAAAGAGAGGAAAACTCACCTTATTTATGATCAACTGATGCTGAAAATATTATAATCAAATAGGCTCATGCAATTGAAAGCATTGCTGCTACTGAAACTCACTCGGTCATATATTCAACCGTTATTCTAATGTAGTTTGAGAGTTCTTTCAATGGTGGATGGATGACTATCtatgtcaggggtgtcaaactcattccatttAGGGCCCAGTGTCTactggtttttgtttttttcctttcaattaacaCCTatacaaccaggt

Function

NR:

description
PREDICTED: inactive dipeptidyl peptidase 10-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021596933.2 True 3639 mRNA 0.45 26 43521331 43626170

Neighbor

gene id symbol gene type direction distance location
LOC110519985 LOC106586111 coding downstream 469917 43015700 ~ 43051414 (-)
LOC110519987 LOC106586109 coding downstream 517274 42946744 ~ 43004057 (-)
LOC118955837 NA coding downstream 904155 42592366 ~ 42617176 (-)
LOC110520683 NA coding downstream 1063625 42455124 ~ 42457706 (-)
LOC110519982 LOC106586070 coding downstream 1157063 42339910 ~ 42364268 (-)
LOC118956029 NA coding upstream 80711 43706881 ~ 43741802 (-)
LOC110519998 LOC106586121 coding upstream 605829 44231999 ~ 44235888 (-)
LOC118956139 NA coding upstream 632999 44259169 ~ 44262998 (-)
LOC110519999 LOC106586089 coding upstream 664656 44290826 ~ 44294051 (-)
LOC110520000 NA coding upstream 799198 44425368 ~ 44468711 (-)
G260914 NA non-coding downstream 11309 43424354 ~ 43510022 (-)
G260792 NA non-coding downstream 270763 43250342 ~ 43250568 (-)
G260776 NA non-coding downstream 289054 43232033 ~ 43232277 (-)
G260771 NA non-coding downstream 294649 43226288 ~ 43226682 (-)
G260762 NA non-coding downstream 304141 43216941 ~ 43217190 (-)
G261186 NA non-coding upstream 161148 43787318 ~ 43789950 (-)
G261211 NA non-coding upstream 201988 43828158 ~ 43828425 (-)
G261222 LOC100380648 non-coding upstream 204838 43831008 ~ 43835153 (-)
G261237 NA non-coding upstream 225446 43851616 ~ 43851818 (-)
G261315 NA non-coding upstream 270535 43896705 ~ 43896958 (-)
G259576 LOC106599288 other downstream 1193336 42285630 ~ 42327995 (-)
G259579 LOC106586070 other downstream 1201946 42290259 ~ 42319385 (-)
col6a3 LOC106598405 other downstream 1205973 42291728 ~ 42329627 (-)
G259259 sdpr other downstream 1753743 41763817 ~ 41767588 (-)
G256632 NA other downstream 3185891 40335210 ~ 40335440 (-)
G261580 NA other upstream 363354 43989524 ~ 44031505 (-)
G262993 NA other upstream 1384002 45010172 ~ 45012249 (-)
LOC110520012 cssa21h2orf88 other upstream 1473170 45099333 ~ 45104286 (-)
G263274 NA other upstream 1910162 45536332 ~ 45537542 (-)
G265988 NA other upstream 3973048 47599218 ~ 47599815 (-)

Expression


Co-expression Network