Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118956122 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 43943124 ~ 43986958 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| histone deacetylase 4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005045715.1 | True | 591 | mRNA | 0.47 | 3 | 43943124 | 43986958 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519997 | lct | coding | upstream | 47476 | 43876264 ~ 43895648 (+) |
| LOC110519995 | LOC106586118 | coding | upstream | 67304 | 43857089 ~ 43875820 (+) |
| LOC110519994 | LOC100380648 | coding | upstream | 97495 | 43830961 ~ 43845629 (+) |
| LOC110519984 | LOC106586113 | coding | upstream | 429237 | 43169785 ~ 43513887 (+) |
| LOC110519989 | LOC106581699 | coding | upstream | 859364 | 43051602 ~ 43083760 (+) |
| LOC110504116 | LOC106586120 | coding | downstream | 88864 | 44075822 ~ 44208107 (+) |
| LOC110520002 | LOC106586124 | coding | downstream | 483213 | 44470171 ~ 44475272 (+) |
| LOC118964364 | NA | coding | downstream | 847553 | 44834511 ~ 44834565 (+) |
| cd18 | cd18 | coding | downstream | 891702 | 44878660 ~ 44903676 (+) |
| LOC110520005 | LOC106586127 | coding | downstream | 917076 | 44904034 ~ 44930884 (+) |
| G261288 | NA | non-coding | upstream | 27840 | 43915055 ~ 43915284 (+) |
| G261285 | NA | non-coding | upstream | 30305 | 43912549 ~ 43912819 (+) |
| G261283 | NA | non-coding | upstream | 32155 | 43910714 ~ 43910969 (+) |
| G261279 | NA | non-coding | upstream | 37282 | 43905554 ~ 43905842 (+) |
| G261278 | NA | non-coding | upstream | 37814 | 43905046 ~ 43905310 (+) |
| G261386 | LOC106581475 | non-coding | downstream | 2880 | 43989838 ~ 44031605 (+) |
| G261725 | NA | non-coding | downstream | 238995 | 44225953 ~ 44226235 (+) |
| G261738 | NA | non-coding | downstream | 251300 | 44238258 ~ 44239058 (+) |
| G261739 | NA | non-coding | downstream | 252219 | 44239177 ~ 44239503 (+) |
| LOC110519969 | LOC106586020 | other | upstream | 3490944 | 40440040 ~ 40452542 (+) |
| LOC110519960 | LOC106586058 | other | upstream | 4275036 | 39658753 ~ 39668297 (+) |
| G254816 | NA | other | upstream | 5098568 | 38843510 ~ 38844556 (+) |
| G254445 | NA | other | upstream | 5342258 | 38600487 ~ 38600866 (+) |
| G254204 | NA | other | upstream | 5501390 | 38441166 ~ 38441734 (+) |
| G261749 | NA | other | downstream | 265111 | 44252069 ~ 44252551 (+) |
| G262037 | NA | other | downstream | 533461 | 44520419 ~ 44525408 (+) |
| G263547 | LOC106586150 | other | downstream | 1851963 | 45838921 ~ 45839480 (+) |
| G263710 | NA | other | downstream | 1947161 | 45934119 ~ 45934418 (+) |
| G263733 | LOC106586158 | other | downstream | 2088526 | 46075484 ~ 46079425 (+) |
