hibch (hibch)


Basic Information

Item Value
gene id hibch
gene name hibch
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 45041037 ~ 45092075 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021596968.2
CGAAGGTAACCAATCAGGAATAGTCTGTTGTCTGCTACCCAGGAAGAACTGTTCGTAAACTTGAACCATTTCTTGAAGCAGGCTGTGCTTTTCAAGCTAATTAGAGAAGGAAAAACTACACAATGTCAATAACTATTTTGAATTCTACGCACAGATTTAGGTCCCTCTGCAGATTGCAAAGAATTCGAGGGCAAATGCAGATGACGAGCCAGGCGGGAGCTGAGATACTGGTGGAGAAAGTGGGGAATGCTGGGGTGATTACCCTGAACCGCCCCAAAGCCCTGAACGCCCTCAACATGAACATGATACGACTCATGTACCCCCAGCTCAAGAAATGGGAGACGGACAAGGAGACTGATATTGTTATTGTCAAAGGAGCCGGTGGGAAAGCCTTCTGTGCTGGTGGAGACATCAGAGCTGTGACTGAAGCAGGGAAGATAGGAGATGCTCTTGCTAAGAACTTCTTCCGTGAAGAATACATCCTGAACAATACTATTGGAACATATCAGAAGCCATATGTGGCCCTTATTGATGGGATAACAATGGGAGGGgGTGTGGGCCTCTCGGTCCATGGGCGGTTTCGGGTGGCCACTGAGAAGACTCTGTTTGCCATGCCGGAGACGGCAATCGGACTGTTCCCTGATGTGGGCGGCGGCTACTTCCTGCCAAGGCTACAGGGCCAGCTGGGCCTCTTCCTGGCCCTGACAGGATTCCGCCTCAAAGGACGCGATGTCCAGAGAGCAGGAGTTGCCAGTCACTTTGTGGAGTCTCAAAAGATTGCAGCCCTTGAGAAAGAGCTGGTGGACCTGAAAACTCCCTCCATTGAAGATGTCTCCAGAGTGTTGGACTCGTATCAGAAACGGAGCAGTCTGGATGCAGAGAAGCCATTTGTCCTTGAGCAGCACATAGACTTGATTGATAAGCTATTCCAGTCCAACAGCGTGGAGGGGATTGTACACAACCTAAAGACAGACGGCTCTCCATTCGCCCAGAAACAAGCTGAGACCCTCGCCAAGATGTCTCCCACATCGCTGAAGATAACCTTCAAGCAGCTTCAGGCTGGAGGCACCATGAGTTTGCAGGAGGTTCTGGTGATGGAGTACAGACTCAGTCAGGCCTGCATGGTGAAGGGCAGTGACTTCTACGAGGGCGTGAGGGCAGTGCTGGTTGACAAGGACCACAGCCCCAAGTGGAGTCCATCCACACTGAAGGAGGTCTCAGAACAGAGTGTGGAGGACTGCTTCTCGTCTTTGGGGGAGCGTGACCTCAAGCTGTAAGGACACCTCAATAGAATAGAACAAGGGGTCAAGGGACATCACTTCCCGCTCATGAGGCCTTCTCATAGGAAGCGTCCTAGTTGCCTAAATGTGTTTCCTTCCCTTGTATCCTTTCCTTCATGGCCACTCATCAGAATCCATATTCTGACTGAGAGCTTTATCATTGAGATAAGCCACCACCTTCACCCATCAGTGGTCATATAGTTGGAGAGGAGACAAAGAAAGGAAGCTACTCTAGAGTAGTCGGTCACAGCCATCAGACATGGTACGCCAGTCACTGGCCTATCACAACAGCAGGACTTTGGCAAGACCACACCCCAGTGCTGTGCCCATTTTTCAATGCATTTTTAAACTAATTGAACGGACTCTTCAAGTATGCCTTCTCAAAAGCTAGCATCAGGCTAAAAGGCTAAAGTTGGATGGATACCAGACCAGTTCTATAGACATTGAGTCAGACGATATGTACAGTATCTCCATTGTGCTGGTGTACAGTATTATTTGCAAAGACCAATATTTCTCGGTACAGTTGGCGGTGCCAAGAAACAAATGTTTGTTTCGGTGAGTAGCTGGGTAAAGAAGAGGTTCTGTCCTGTTTGAAGTGTCATATAACTTGGGAGAGTACTGTCAGGTGGTTATTATGGCCCTTGTTGAGTGTCATAATGTCCTGTTTATGACTGTctttcagtcagtctgtctctccagTACATTTCCTATGGATTCAATCAAATGCACATTGCTGGAAGCCCGGACTGGGAAAACACCATGTTAAAATGTGCAGACTAATTTCTACctaatttggatttttatgatTTTGCAGTGCTTTGTCATTTTTCTGCAGTGTGTCTTCGACTGAATCTGGCCTTTTTGCGTTTCTCTGTACCCAGCTCAAATCATTGATTATATGAAATCCCATTCGCAGCACTCAAACCCTCAGCACACAGTTAAGAGCTCTTACAGGCTCCCAGACAGAAATTAGGTCAGTGGCTGAAAGACCCACCACAAAGTTTGCTAAGTAAACAATGAACCAGCGTAAACACTCTCCTAGAGCACACAGGCTCAGTAATTATCTTGGCTTCAGAGATAAGCTTTTATGGTTTAGGATTTGCCCTTCAAAAGTCACCAGCCAGGTGTCATTCTTAATGCCTTTTAGCTTTGTCATGTAGCTGGAGTGATCACTCGGCGTTGCATTTTTCATTGCATTACTGTATGGCAAAGGCCAGAAGTTCTCAATTCATTGTGCGCTCTTCAGTATCCAATTCAATGGATACAATTTCCCAACTAATAGCTGTAAAAAATCTCTTCTATAAGAAATATGTTGATAAAGATGTGTATGGAAACCTGattgtaatttgttttatttgatttaattgtTTGAAGTCATCGTTGATAAAAACCATAATTATGTTGTGCCTGCCTATGTaactacacagaacaaaaatataaacggaaagtgctggtcccatgtttcgtgagctgaaataaaagatcacaaatgttccaaatgcacaaaaa
>XM_021596969.2
CGAAGGTAACCAATCAGGAATAGTCTGTTGTCTGCTACCCAGGAAGAACTGTTCGTAAACTTGAACCATTTCTTGAAGCAGGCTGTGCTTTTCAAGCTAATTAGAGAAGGAAAAACTACACAATGTCAATAACTATTTTGAATTCTACGCACAGATTTAGGTCCCTCTGCAGATTGCAAAGAATTCGAGGGCAAATGATGACGAGCCAGGCGGGAGCTGAGATACTGGTGGAGAAAGTGGGGAATGCTGGGGTGATTACCCTGAACCGCCCCAAAGCCCTGAACGCCCTCAACATGAACATGATACGACTCATGTACCCCCAGCTCAAGAAATGGGAGACGGACAAGGAGACTGATATTGTTATTGTCAAAGGAGCCGGTGGGAAAGCCTTCTGTGCTGGTGGAGACATCAGAGCTGTGACTGAAGCAGGGAAGATAGGAGATGCTCTTGCTAAGAACTTCTTCCGTGAAGAATACATCCTGAACAATACTATTGGAACATATCAGAAGCCATATGTGGCCCTTATTGATGGGATAACAATGGGAGGGgGTGTGGGCCTCTCGGTCCATGGGCGGTTTCGGGTGGCCACTGAGAAGACTCTGTTTGCCATGCCGGAGACGGCAATCGGACTGTTCCCTGATGTGGGCGGCGGCTACTTCCTGCCAAGGCTACAGGGCCAGCTGGGCCTCTTCCTGGCCCTGACAGGATTCCGCCTCAAAGGACGCGATGTCCAGAGAGCAGGAGTTGCCAGTCACTTTGTGGAGTCTCAAAAGATTGCAGCCCTTGAGAAAGAGCTGGTGGACCTGAAAACTCCCTCCATTGAAGATGTCTCCAGAGTGTTGGACTCGTATCAGAAACGGAGCAGTCTGGATGCAGAGAAGCCATTTGTCCTTGAGCAGCACATAGACTTGATTGATAAGCTATTCCAGTCCAACAGCGTGGAGGGGATTGTACACAACCTAAAGACAGACGGCTCTCCATTCGCCCAGAAACAAGCTGAGACCCTCGCCAAGATGTCTCCCACATCGCTGAAGATAACCTTCAAGCAGCTTCAGGCTGGAGGCACCATGAGTTTGCAGGAGGTTCTGGTGATGGAGTACAGACTCAGTCAGGCCTGCATGGTGAAGGGCAGTGACTTCTACGAGGGCGTGAGGGCAGTGCTGGTTGACAAGGACCACAGCCCCAAGTGGAGTCCATCCACACTGAAGGAGGTCTCAGAACAGAGTGTGGAGGACTGCTTCTCGTCTTTGGGGGAGCGTGACCTCAAGCTGTAAGGACACCTCAATAGAATAGAACAAGGGGTCAAGGGACATCACTTCCCGCTCATGAGGCCTTCTCATAGGAAGCGTCCTAGTTGCCTAAATGTGTTTCCTTCCCTTGTATCCTTTCCTTCATGGCCACTCATCAGAATCCATATTCTGACTGAGAGCTTTATCATTGAGATAAGCCACCACCTTCACCCATCAGTGGTCATATAGTTGGAGAGGAGACAAAGAAAGGAAGCTACTCTAGAGTAGTCGGTCACAGCCATCAGACATGGTACGCCAGTCACTGGCCTATCACAACAGCAGGACTTTGGCAAGACCACACCCCAGTGCTGTGCCCATTTTTCAATGCATTTTTAAACTAATTGAACGGACTCTTCAAGTATGCCTTCTCAAAAGCTAGCATCAGGCTAAAAGGCTAAAGTTGGATGGATACCAGACCAGTTCTATAGACATTGAGTCAGACGATATGTACAGTATCTCCATTGTGCTGGTGTACAGTATTATTTGCAAAGACCAATATTTCTCGGTACAGTTGGCGGTGCCAAGAAACAAATGTTTGTTTCGGTGAGTAGCTGGGTAAAGAAGAGGTTCTGTCCTGTTTGAAGTGTCATATAACTTGGGAGAGTACTGTCAGGTGGTTATTATGGCCCTTGTTGAGTGTCATAATGTCCTGTTTATGACTGTctttcagtcagtctgtctctccagTACATTTCCTATGGATTCAATCAAATGCACATTGCTGGAAGCCCGGACTGGGAAAACACCATGTTAAAATGTGCAGACTAATTTCTACctaatttggatttttatgatTTTGCAGTGCTTTGTCATTTTTCTGCAGTGTGTCTTCGACTGAATCTGGCCTTTTTGCGTTTCTCTGTACCCAGCTCAAATCATTGATTATATGAAATCCCATTCGCAGCACTCAAACCCTCAGCACACAGTTAAGAGCTCTTACAGGCTCCCAGACAGAAATTAGGTCAGTGGCTGAAAGACCCACCACAAAGTTTGCTAAGTAAACAATGAACCAGCGTAAACACTCTCCTAGAGCACACAGGCTCAGTAATTATCTTGGCTTCAGAGATAAGCTTTTATGGTTTAGGATTTGCCCTTCAAAAGTCACCAGCCAGGTGTCATTCTTAATGCCTTTTAGCTTTGTCATGTAGCTGGAGTGATCACTCGGCGTTGCATTTTTCATTGCATTACTGTATGGCAAAGGCCAGAAGTTCTCAATTCATTGTGCGCTCTTCAGTATCCAATTCAATGGATACAATTTCCCAACTAATAGCTGTAAAAAATCTCTTCTATAAGAAATATGTTGATAAAGATGTGTATGGAAACCTGattgtaatttgttttatttgatttaattgtTTGAAGTCATCGTTGATAAAAACCATAATTATGTTGTGCCTGCCTATGTaactacacagaacaaaaatataaacggaaagtgctggtcccatgtttcgtgagctgaaataaaagatcacaaatgttccaaatgcacaaaaa

Function

symbol description
hibch Predicted to enable 3-hydroxyisobutyryl-CoA hydrolase activity. Predicted to be involved in valine catabolic process. Predicted to act upstream of or within branched-chain amino acid catabolic process. Predicted to be active in mitochondrion. Orthologous to human HIBCH (3-hydroxyisobutyryl-CoA hydrolase).

NR:

description
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial-like

GO: NA

KEGG:

id description
K05605 HIBCH; 3-hydroxyisobutyryl-CoA hydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021596968.2 False 2789 mRNA 0.46 14 45041037 45092075
XM_021596969.2 True 2786 mRNA 0.46 14 45041037 45092075

Neighbor

gene id symbol gene type direction distance location
LOC110505238 NA coding upstream 5691 45028832 ~ 45035346 (+)
LOC110520010 LOC106586134 coding upstream 30413 44989108 ~ 45010624 (+)
LOC110520005 LOC106586127 coding upstream 110153 44904034 ~ 44930884 (+)
cd18 cd18 coding upstream 137361 44878660 ~ 44903676 (+)
LOC118964364 NA coding upstream 206472 44834511 ~ 44834565 (+)
LOC100135920 LOC100135920 coding downstream 13704 45105779 ~ 45108587 (+)
LOC110520014 ormdl1 coding downstream 99645 45191720 ~ 45209591 (+)
LOC110520018 LOC106586140 coding downstream 187862 45279937 ~ 45292634 (+)
glsb LOC106586143 coding downstream 248254 45340329 ~ 45399501 (+)
LOC118956876 NA coding downstream 402234 45494309 ~ 45495980 (+)
G262313 NA non-coding upstream 81862 44958687 ~ 44959175 (+)
G262259 NA non-coding upstream 148978 44851379 ~ 44892059 (+)
G262035 NA non-coding upstream 524553 44516200 ~ 44516484 (+)
G262028 NA non-coding upstream 532946 44507752 ~ 44508091 (+)
G262024 NA non-coding upstream 540440 44500343 ~ 44500597 (+)
G262735 cssa21h2orf88 non-coding downstream 7964 45100039 ~ 45102438 (+)
G262807 NA non-coding downstream 106275 45198350 ~ 45198602 (+)
G262814 NA non-coding downstream 135098 45227173 ~ 45227384 (+)
G262820 NA non-coding downstream 150775 45242850 ~ 45243091 (+)
G262827 NA non-coding downstream 162122 45254197 ~ 45254448 (+)
G262037 NA other upstream 515629 44520419 ~ 44525408 (+)
G261749 NA other upstream 788486 44252069 ~ 44252551 (+)
LOC110519969 LOC106586020 other upstream 4588857 40440040 ~ 40452542 (+)
LOC110519960 LOC106586058 other upstream 5372949 39658753 ~ 39668297 (+)
G254816 NA other upstream 6196481 38843510 ~ 38844556 (+)
G263547 LOC106586150 other downstream 746846 45838921 ~ 45839480 (+)
G263710 NA other downstream 842044 45934119 ~ 45934418 (+)
G263733 LOC106586158 other downstream 983409 46075484 ~ 46079425 (+)
G263859 LOC107588258 other downstream 1092059 46184134 ~ 46184804 (+)
LOC110520046 LOC106586167 other downstream 1738933 46801058 ~ 46832288 (+)

Expression


Co-expression Network