LOC110520042 (LOC106586165)


Basic Information

Item Value
gene id LOC110520042
gene name LOC106586165
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 46546837 ~ 46599080 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021597021.2
CCTTTCATTCAGAAGCAAACTAACCAATCAGATTGCACGTTATTGTAGCGTGGCTGCTGGATGCGCATCGTGAAGTCAACATGATGGGACCACCAGGAATGCCGCCTCATTATCCACCAATGGGAATGCCACCCATGGGACAGAGGCCTCCCAACATGGCTCCCATGCCACCTGGTATGATGCCACCTGGCATGATGCCACCAATGGGAGGGCCACCCATGGGACAGATGCCAGGCATGATGCCACCTATGATGCCTGGGATGATGATGCCACCTCGCATGCCAGCTGCGACGATGCAGCCAACAGGACCGCCTGGAGTGGACACAACTGTCATCGCTATGCCTGGAACAGTTGGTACCACAAATGGCTCGCCACAGGATGACCAACCAAAGAATAAGTCTGTGTGGACAGAACATAAGTCCCTGGATGAGAagacctactactacaacacagagacCAAGCAGTCTTCCTGGGAAAAGCCAGACGACCTGAAATCTCCTGCAGAACAAATGCTGTCTAAATGCCAATGGAAGGAGTACAAATCAGACAATGGGAAGGCGTACTACTACAACTCCCACACTAAGGAGTCCCGGTGGACCAAACCCAAAGAGCTTGAAGATCTGGAAGcCATGATAAAAGCTGAGGAGAATGGGATGGCGGAGGTGGGTGCTCCTGGCACTGTCATCATCACCCCCAACCATCAGCTCGACAGCGTTGCTTCGATGGCGACCATGATGATGGAAATGCCGGCCATGAGGCCAGCTCCAACCGTCTCAGTGGAACAGATGTCCCTGGTGCCCATGCTTGTAGCTGAGGTCAACGCTGACTCGCCTGTCAACTCCACAGAGGACTTGGCCGGCATGGAGGCCTCAGCCAGTAATGACGCCTCAAAAGAGGAGAGGCCAGAGCTGGTGAAGAAAACGTACAAGTGGAACACGAAAGAAGAGGCCAAGCAGGCCTTCAAAGAGCTCCTGAAGGAGAAGGGCGTTTCATCCAATGCGTCTTGGGAACAAGCCATGAAAATGATCATCAATGACCCACGCTACAGTGCTCTGCCGAAGTTAAGTGAGAAAAAGCAGGCCTTCAATGCTTACAAGGTGCAGacggagaaagaggagaaggaggagactaGGATCAAGTACAAGGAATCCAAGGAAATGTATCAGCGATTTTTGGAAAACCACGAGAAAATGACATCTACAACCAGATATAAGAAAGCAGAGCAGATGTTTGCGGAGCTCGATGTGTGGAGCACCGTCCCAGAGAGGGACAGACTGGAGATCTATGAAGACGTCCTGTTCTACCTAGCCAAGAAGGAGAAGgagCAAGCCAAGCAGCTGAGGAAGAGGAACTGGGAGGCTCTGAAGAACATCCTGGACAACATGGCCAACGTGACGTACCGCACCACCTGGTCCGAGGCCCAGCAGTACCTGCTGGACAACCCCACCTTCGCAGAGGACGAGGAGCTCCAGAACATGGACAAAGAGGACGCTCTGATCTGTTTCGAGGAGCACATCCGAGctctggagaaggaggaggaggacgagaagCAGAAGACACtgctgagggagaggaggagacagcgCAAGAACAGAGAGTCCTTCCAGaaattcCTGGATGAGCTCCATGACAACGGTCAGCTCCACTCCATGTCTGCGTGGATGGAGATGTACCCCACCGTCAGCTCAGACATCCACTTCGCCAACATGCTGGGCCAGCCAGTTTATGGTGTCTATTCCGCAGGCTCCACTCCCCTCGATCTGTTCAAGTTCTACGTGGAAGACCTGAAGGCTCGCTACCACGACGAGAAGCGGATCATTAAGGATATCCTGAAGGACAAAAACTTCTTGGTGGAGGTAAACACTAGCTTTGAAGACTTTGGCACTGTGATCAGCTCAGACAAGAGAGCCACAACGCTGGACGCAGGCAACATCAAGCTAGCCTTCAACAGCTTGCTGGAGAAGGCAGAGGCtcgggagagggagcgggagaaggAGGAGGCCAGGAAGATGAAGAGGAAAGAGGCTACCTTCAAGAGCATGTTGAAGCAGGCTACCCCAGCCCTGGAACCAGAGGCAACCTGGGAAGAAGTCCGAGAAAGATTCCTCAAAGAATCTGCATTCGAAGACGTGACTCTGGAGTCTGAGAGGAAAAGGATATTCAAAGACTTCATGCATGTCTTGGAGCACGAGTGCCAGCATCATCACTCCAAGACCAAGAAACACTCAAAGAAGTCCAAGAAGCACCACAGGAAGCGCTCCCGCTCTCGATCGgGCTCAGAGTCTGAAGGCGAAGACGATTATCACACCAAGAAGAAGAAGCGCTCACAGTCCAAGTCCCCGTCCGAGCGCTCCTCCAGTGGGGAATCTGATAGAAGTTATAAGAAGTCCAAGAAGCACAAGAAGAAGGGGAAGAAGAGGCGTCACAAGTCGCAATCTCCTGAATCCGAAGGCGAGcggaaagagaagggaggaagagagagggacggCAAGCGGGAGAAGGaccaggagaaagagaaagagaacgacAAGTCCCGGGGGAAGAGTCGCTCCGAATCCAAGCAGAAGTCACCTAAAAGGAAATCTACCAAGGAGGAGGGTGGCTGGGACACTTCAGGCAGCGAGCTGAGTGAAGGAGagctggagaagaggaggaggactctACTGGAACAGCTGGATGCTCCTTGATCCTGTTTTTCCTCATGCTTCCTTTCATCCACCATAGATTCCCCCCGGTGCTTATTTTTCAGCGTAATGCCACACATGCTTGGACTTAAGGTTATACAATTCCGGTAACTTTCCCAAACTTCACAggtttttccagaaatcccagttaGAAGATTTGCTTAATTCCTGCCAATTTTTGTCTAAGTTACCAGAATGTTTTCAACCCTTTTTGGACTGTGTGTGAACTATTCCCCTTGTGTTTTGTATAATGGGAATGAACCCGACACCCTGGCACTAGAATGCTTGGTAAATATTTGCTCTGTTTTCTTACGTTATTGGAAGTGGTCACAGGCTGAGTTGAGTGACTACTTTGATATCAGGTCAACTGTGTGGACATTTAGTGACACACTTCAGAAATGTGTTGCCTTTTTTATAATGTTTTCTCGCTAgctattttatttgttttgtagTTGTTTGATATCGAAATGGATTCAAAGAGCATCTTAATGCCATGCTCTTTACTGTGACTGCCTTGCAGTTCTCAGTACAATTCTTATCCGAGTCACAAATGGCACTGTatttattccctttatagtgcactacttttgactagggccctcaaagtaaaaaaatgtatacaaatttAGTTTAGGAAATCTGACAAAATATCCAGCAAATAAAAAGAGATGTGATTGTGTCTCAgtgtaatcaaggtttgaaattattttcaaataaaataaatacatttttgtgcTTAGTTGTgctcaatttgcagtgtacaaattttAATGATTTTCCGGACCTCCGACCATCCGCTCCGACAAAAAAATTGCCCCGCAGCTGAATCTCGTTGCATACCGCTGCTTTGGACTGAGGTAGAACTCTTTGGCAAAGGTCCACGTCTAGACTGAAGTAAATGTCTCTCTGAAACAAGActctttaaaatacattttttatggtATTTTTAGGATTGGTTCGCTAGATTTTCACGAGAGGAATTGTGAAAGTCCTCGTTGCATGATCTATAAATGTAATAAAATACAGTTGACATGAATTTGTTTGTCTTCATGTACCATCACCAGCAGCCACCATAGATCGGAGCTCATTATTTTCTGTACATATGACCTCTCTGTTATGAGTGCCTCTTGTTCACTAGGCTTAGTAGCCTTGTATCCGTTTCCTGTGGATCATTGCAATGCTAGGCAGGCTGAAGGTAATAATTGCTACTGTAAGAGGGAGTGCCCGAGACAACGTGGCTCAGGACAATCTAGATTAAGCTCCAATAACATCACCAGGGCTGTGGCACGGTTGCCGAAGACCGCCAGAAGTGGCAAATCCAAACCTTTGTTGCTGCCCGATGCCCCAAGCCCGCCAGACGGGCGAGTAAAGATTTCCACAGTTTACATACACGGAGATGACAAGACCGACTTCTCCTGTTGTTTTCATATCAATGAGCATGCATAGAAAACCAGAGTGAATCTGAACAGCTGTCTGCCAAAATGAATTGAAATAAAGATGCACACG
>XM_036974306.1
CCTCAACATCAATATAtggagtcaacatacaagtCGTGGCTGCTGGATGCGCATCGTGAAGTCAACATGATGGGACCACCAGGAATGCCGCCTCATTATCCACCAATGGGAATGCCACCCATGGGACAGAGGCCTCCCAACATGGCTCCCATGCCACCTGGTATGATGCCACCTGGCATGATGCCACCAATGGGAGGGCCACCCATGGGACAGATGCCAGGCATGATGCCACCTATGATGCCTGGGATGATGATGCCACCTCGCATGCCAGCTGCGACGATGCAGCCAACAGGACCGCCTGGAGTGGACACAACTGTCATCGCTATGCCTGGAACAGTTGGTACCACAAATGGCTCGCCACAGGATGACCAACCAAAGAATAAGTCTGTGTGGACAGAACATAAGTCCCTGGATGAGAagacctactactacaacacagagacCAAGCAGTCTTCCTGGGAAAAGCCAGACGACCTGAAATCTCCTGCAGAACAAATGCTGTCTAAATGCCAATGGAAGGAGTACAAATCAGACAATGGGAAGGCGTACTACTACAACTCCCACACTAAGGAGTCCCGGTGGACCAAACCCAAAGAGCTTGAAGATCTGGAAGcCATGATAAAAGCTGAGGAGAATGGGATGGCGGAGGTGGGTGCTCCTGGCACTGTCATCATCACCCCCAACCATCAGCTCGACAGCGTTGCTTCGATGGCGACCATGATGATGGAAATGCCGGCCATGAGGCCAGCTCCAACCGTCTCAGTGGAACAGATGTCCCTGGTGCCCATGCTTGTAGCTGAGGTCAACGCTGACTCGCCTGTCAACTCCACAGAGGACTTGGCCGGCATGGAGGCCTCAGCCAGTAATGACGCCTCAAAAGAGGAGAGGCCAGAGCTGGTGAAGAAAACGTACAAGTGGAACACGAAAGAAGAGGCCAAGCAGGCCTTCAAAGAGCTCCTGAAGGAGAAGGGCGTTTCATCCAATGCGTCTTGGGAACAAGCCATGAAAATGATCATCAATGACCCACGCTACAGTGCTCTGCCGAAGTTAAGTGAGAAAAAGCAGGCCTTCAATGCTTACAAGGTGCAGacggagaaagaggagaaggaggagactaGGATCAAGTACAAGGAATCCAAGGAAATGTATCAGCGATTTTTGGAAAACCACGAGAAAATGACATCTACAACCAGATATAAGAAAGCAGAGCAGATGTTTGCGGAGCTCGATGTGTGGAGCACCGTCCCAGAGAGGGACAGACTGGAGATCTATGAAGACGTCCTGTTCTACCTAGCCAAGAAGGAGAAGgagCAAGCCAAGCAGCTGAGGAAGAGGAACTGGGAGGCTCTGAAGAACATCCTGGACAACATGGCCAACGTGACGTACCGCACCACCTGGTCCGAGGCCCAGCAGTACCTGCTGGACAACCCCACCTTCGCAGAGGACGAGGAGCTCCAGAACATGGACAAAGAGGACGCTCTGATCTGTTTCGAGGAGCACATCCGAGctctggagaaggaggaggaggacgagaagCAGAAGACACtgctgagggagaggaggagacagcgCAAGAACAGAGAGTCCTTCCAGaaattcCTGGATGAGCTCCATGACAACGGTCAGCTCCACTCCATGTCTGCGTGGATGGAGATGTACCCCACCGTCAGCTCAGACATCCACTTCGCCAACATGCTGGGCCAGCCAGTTTATGGTGTCTATTCCGCAGGCTCCACTCCCCTCGATCTGTTCAAGTTCTACGTGGAAGACCTGAAGGCTCGCTACCACGACGAGAAGCGGATCATTAAGGATATCCTGAAGGACAAAAACTTCTTGGTGGAGGTAAACACTAGCTTTGAAGACTTTGGCACTGTGATCAGCTCAGACAAGAGAGCCACAACGCTGGACGCAGGCAACATCAAGCTAGCCTTCAACAGCTTGCTGGAGAAGGCAGAGGCtcgggagagggagcgggagaaggAGGAGGCCAGGAAGATGAAGAGGAAAGAGGCTACCTTCAAGAGCATGTTGAAGCAGGCTACCCCAGCCCTGGAACCAGAGGCAACCTGGGAAGAAGTCCGAGAAAGATTCCTCAAAGAATCTGCATTCGAAGACGTGACTCTGGAGTCTGAGAGGAAAAGGATATTCAAAGACTTCATGCATGTCTTGGAGCACGAGTGCCAGCATCATCACTCCAAGACCAAGAAACACTCAAAGAAGTCCAAGAAGCACCACAGGAAGCGCTCCCGCTCTCGATCGgGCTCAGAGTCTGAAGGCGAAGACGATTATCACACCAAGAAGAAGAAGCGCTCACAGTCCAAGTCCCCGTCCGAGCGCTCCTCCAGTGGGGAATCTGATAGAAGTTATAAGAAGTCCAAGAAGCACAAGAAGAAGGGGAAGAAGAGGCGTCACAAGTCGCAATCTCCTGAATCCGAAGGCGAGcggaaagagaagggaggaagagagagggacggCAAGCGGGAGAAGGaccaggagaaagagaaagagaacgacAAGTCCCGGGGGAAGAGTCGCTCCGAATCCAAGCAGAAGTCACCTAAAAGGAAATCTACCAAGGAGGAGGGTGGCTGGGACACTTCAGGCAGCGAGCTGAGTGAAGGAGagctggagaagaggaggaggactctACTGGAACAGCTGGATGCTCCTTGATCCTGTTTTTCCTCATGCTTCCTTTCATCCACCATAGATTCCCCCCGGTGCTTATTTTTCAGCGTAATGCCACACATGCTTGGACTTAAGGTTATACAATTCCGGTAACTTTCCCAAACTTCACAggtttttccagaaatcccagttaGAAGATTTGCTTAATTCCTGCCAATTTTTGTCTAAGTTACCAGAATGTTTTCAACCCTTTTTGGACTGTGTGTGAACTATTCCCCTTGTGTTTTGTATAATGGGAATGAACCCGACACCCTGGCACTAGAATGCTTGGTAAATATTTGCTCTGTTTTCTTACGTTATTGGAAGTGGTCACAGGCTGAGTTGAGTGACTACTTTGATATCAGGTCAACTGTGTGGACATTTAGTGACACACTTCAGAAATGTGTTGCCTTTTTTATAATGTTTTCTCGCTAgctattttatttgttttgtagTTGTTTGATATCGAAATGGATTCAAAGAGCATCTTAATGCCATGCTCTTTACTGTGACTGCCTTGCAGTTCTCAGTACAATTCTTATCCGAGTCACAAATGGCACTGTatttattccctttatagtgcactacttttgactagggccctcaaagtaaaaaaatgtatacaaatttAGTTTAGGAAATCTGACAAAATATCCAGCAAATAAAAAGAGATGTGATTGTGTCTCAgtgtaatcaaggtttgaaattattttcaaataaaataaatacatttttgtgcTTAGTTGTgctcaatttgcagtgtacaaattttAATGATTTTCCGGACCTCCGACCATCCGCTCCGACAAAAAAATTGCCCCGCAGCTGAATCTCGTTGCATACCGCTGCTTTGGACTGAGGTAGAACTCTTTGGCAAAGGTCCACGTCTAGACTGAAGTAAATGTCTCTCTGAAACAAGActctttaaaatacattttttatggtATTTTTAGGATTGGTTCGCTAGATTTTCACGAGAGGAATTGTGAAAGTCCTCGTTGCATGATCTATAAATGTAATAAAATACAGTTGACATGAATTTGTTTGTCTTCATGTACCATCACCAGCAGCCACCATAGATCGGAGCTCATTATTTTCTGTACATATGACCTCTCTGTTATGAGTGCCTCTTGTTCACTAGGCTTAGTAGCCTTGTATCCGTTTCCTGTGGATCATTGCAATGCTAGGCAGGCTGAAGGTAATAATTGCTACTGTAAGAGGGAGTGCCCGAGACAACGTGGCTCAGGACAATCTAGATTAAGCTCCAATAACATCACCAGGGCTGTGGCACGGTTGCCGAAGACCGCCAGAAGTGGCAAATCCAAACCTTTGTTGCTGCCCGATGCCCCAAGCCCGCCAGACGGGCGAGTAAAGATTTCCACAGTTTACATACACGGAGATGACAAGACCGACTTCTCCTGTTGTTTTCATATCAATGAGCATGCATAGAAAACCAGAGTGAATCTGAACAGCTGTCTGCCAAAATGAATTGAAATAAAGATGCACACG
>XM_021597019.2
gtttgcatTATAAGCCCTTCCGCCCTCGTTTTTAGTCGAGTTTGCGAGTGTACGATTATGTTCACTTCGAggcctgaaactccccataattACATGTACATCCGTTAAGAAAAGTCTGCCAAAAATTAAAACCTCAACATCAATATAtggagtcaacatacaagtCGTGGCTGCTGGATGCGCATCGTGAAGTCAACATGTCTTCAGATGATAATAATGGCCAGAGCCAAGCACCTTCTTTTGCTGGGGTCCCACCCTCAGGGATGCCACCGCCTTTTATGGGACCACCAGGAATGCCGCCTCATTATCCACCAATGGGAATGCCACCCATGGGACAGAGGCCTCCCAACATGGCTCCCATGCCACCTGGTATGATGCCACCTGGCATGATGCCACCAATGGGAGGGCCACCCATGGGACAGATGCCAGGCATGATGCCACCTATGATGCCTGGGATGATGATGCCACCTCGCATGCCAGCTGCGACGATGCAGCCAACAGGACCGCCTGGAGTGGACACAACTGTCATCGCTATGCCTGGAACAGTTGGTACCACAAATGGCTCGCCACAGGATGACCAACCAAAGAATAAGTCTGTGTGGACAGAACATAAGTCCCTGGATGAGAagacctactactacaacacagagacCAAGCAGTCTTCCTGGGAAAAGCCAGACGACCTGAAATCTCCTGCAGAACAAATGCTGTCTAAATGCCAATGGAAGGAGTACAAATCAGACAATGGGAAGGCGTACTACTACAACTCCCACACTAAGGAGTCCCGGTGGACCAAACCCAAAGAGCTTGAAGATCTGGAAGcCATGATAAAAGCTGAGGAGAATGGGATGGCGGAGGTGGGTGCTCCTGGCACTGTCATCATCACCCCCAACCATCAGCTCGACAGCGTTGCTTCGATGGCGACCATGATGATGGAAATGCCGGCCATGAGGCCAGCTCCAACCGTCTCAGTGGAACAGATGTCCCTGGTGCCCATGCTTGTAGCTGAGGTCAACGCTGACTCGCCTGTCAACTCCACAGAGGACTTGGCCGGCATGGAGGCCTCAGCCAGTAATGACGCCTCAAAAGAGGAGAGGCCAGAGCTGGTGAAGAAAACGTACAAGTGGAACACGAAAGAAGAGGCCAAGCAGGCCTTCAAAGAGCTCCTGAAGGAGAAGGGCGTTTCATCCAATGCGTCTTGGGAACAAGCCATGAAAATGATCATCAATGACCCACGCTACAGTGCTCTGCCGAAGTTAAGTGAGAAAAAGCAGGCCTTCAATGCTTACAAGGTGCAGacggagaaagaggagaaggaggagactaGGATCAAGTACAAGGAATCCAAGGAAATGTATCAGCGATTTTTGGAAAACCACGAGAAAATGACATCTACAACCAGATATAAGAAAGCAGAGCAGATGTTTGCGGAGCTCGATGTGTGGAGCACCGTCCCAGAGAGGGACAGACTGGAGATCTATGAAGACGTCCTGTTCTACCTAGCCAAGAAGGAGAAGgagCAAGCCAAGCAGCTGAGGAAGAGGAACTGGGAGGCTCTGAAGAACATCCTGGACAACATGGCCAACGTGACGTACCGCACCACCTGGTCCGAGGCCCAGCAGTACCTGCTGGACAACCCCACCTTCGCAGAGGACGAGGAGCTCCAGAACATGGACAAAGAGGACGCTCTGATCTGTTTCGAGGAGCACATCCGAGctctggagaaggaggaggaggacgagaagCAGAAGACACtgctgagggagaggaggagacagcgCAAGAACAGAGAGTCCTTCCAGaaattcCTGGATGAGCTCCATGACAACGGTCAGCTCCACTCCATGTCTGCGTGGATGGAGATGTACCCCACCGTCAGCTCAGACATCCACTTCGCCAACATGCTGGGCCAGCCAGTTTATGGTGTCTATTCCGCAGGCTCCACTCCCCTCGATCTGTTCAAGTTCTACGTGGAAGACCTGAAGGCTCGCTACCACGACGAGAAGCGGATCATTAAGGATATCCTGAAGGACAAAAACTTCTTGGTGGAGGTAAACACTAGCTTTGAAGACTTTGGCACTGTGATCAGCTCAGACAAGAGAGCCACAACGCTGGACGCAGGCAACATCAAGCTAGCCTTCAACAGCTTGCTGGAGAAGGCAGAGGCtcgggagagggagcgggagaaggAGGAGGCCAGGAAGATGAAGAGGAAAGAGGCTACCTTCAAGAGCATGTTGAAGCAGGCTACCCCAGCCCTGGAACCAGAGGCAACCTGGGAAGAAGTCCGAGAAAGATTCCTCAAAGAATCTGCATTCGAAGACGTGACTCTGGAGTCTGAGAGGAAAAGGATATTCAAAGACTTCATGCATGTCTTGGAGCACGAGTGCCAGCATCATCACTCCAAGACCAAGAAACACTCAAAGAAGTCCAAGAAGCACCACAGGAAGCGCTCCCGCTCTCGATCGgGCTCAGAGTCTGAAGGCGAAGACGATTATCACACCAAGAAGAAGAAGCGCTCACAGTCCAAGTCCCCGTCCGAGCGCTCCTCCAGTGGGGAATCTGATAGAAGTTATAAGAAGTCCAAGAAGCACAAGAAGAAGGGGAAGAAGAGGCGTCACAAGTCGCAATCTCCTGAATCCGAAGGCGAGcggaaagagaagggaggaagagagagggacggCAAGCGGGAGAAGGaccaggagaaagagaaagagaacgacAAGTCCCGGGGGAAGAGTCGCTCCGAATCCAAGCAGAAGTCACCTAAAAGGAAATCTACCAAGGAGGAGGGTGGCTGGGACACTTCAGGCAGCGAGCTGAGTGAAGGAGagctggagaagaggaggaggactctACTGGAACAGCTGGATGCTCCTTGATCCTGTTTTTCCTCATGCTTCCTTTCATCCACCATAGATTCCCCCCGGTGCTTATTTTTCAGCGTAATGCCACACATGCTTGGACTTAAGGTTATACAATTCCGGTAACTTTCCCAAACTTCACAggtttttccagaaatcccagttaGAAGATTTGCTTAATTCCTGCCAATTTTTGTCTAAGTTACCAGAATGTTTTCAACCCTTTTTGGACTGTGTGTGAACTATTCCCCTTGTGTTTTGTATAATGGGAATGAACCCGACACCCTGGCACTAGAATGCTTGGTAAATATTTGCTCTGTTTTCTTACGTTATTGGAAGTGGTCACAGGCTGAGTTGAGTGACTACTTTGATATCAGGTCAACTGTGTGGACATTTAGTGACACACTTCAGAAATGTGTTGCCTTTTTTATAATGTTTTCTCGCTAgctattttatttgttttgtagTTGTTTGATATCGAAATGGATTCAAAGAGCATCTTAATGCCATGCTCTTTACTGTGACTGCCTTGCAGTTCTCAGTACAATTCTTATCCGAGTCACAAATGGCACTGTatttattccctttatagtgcactacttttgactagggccctcaaagtaaaaaaatgtatacaaatttAGTTTAGGAAATCTGACAAAATATCCAGCAAATAAAAAGAGATGTGATTGTGTCTCAgtgtaatcaaggtttgaaattattttcaaataaaataaatacatttttgtgcTTAGTTGTgctcaatttgcagtgtacaaattttAATGATTTTCCGGACCTCCGACCATCCGCTCCGACAAAAAAATTGCCCCGCAGCTGAATCTCGTTGCATACCGCTGCTTTGGACTGAGGTAGAACTCTTTGGCAAAGGTCCACGTCTAGACTGAAGTAAATGTCTCTCTGAAACAAGActctttaaaatacattttttatggtATTTTTAGGATTGGTTCGCTAGATTTTCACGAGAGGAATTGTGAAAGTCCTCGTTGCATGATCTATAAATGTAATAAAATACAGTTGACATGAATTTGTTTGTCTTCATGTACCATCACCAGCAGCCACCATAGATCGGAGCTCATTATTTTCTGTACATATGACCTCTCTGTTATGAGTGCCTCTTGTTCACTAGGCTTAGTAGCCTTGTATCCGTTTCCTGTGGATCATTGCAATGCTAGGCAGGCTGAAGGTAATAATTGCTACTGTAAGAGGGAGTGCCCGAGACAACGTGGCTCAGGACAATCTAGATTAAGCTCCAATAACATCACCAGGGCTGTGGCACGGTTGCCGAAGACCGCCAGAAGTGGCAAATCCAAACCTTTGTTGCTGCCCGATGCCCCAAGCCCGCCAGACGGGCGAGTAAAGATTTCCACAGTTTACATACACGGAGATGACAAGACCGACTTCTCCTGTTGTTTTCATATCAATGAGCATGCATAGAAAACCAGAGTGAATCTGAACAGCTGTCTGCCAAAATGAATTGAAATAAAGATGCACACG
>XM_021597020.2
gaagtttgcatTATAAGCCCTTCCGCCCTCGTTTTTAGTCGAGTTTGCGAGTGTACGATTATGTTCACTTCGAggcctgaaactccccataattACATGTACATCCGTTAAGAAAAGTCTGCCAAAAATTAAAACCTCAACATCAATATAtggagtcaacatacaagtCGTGGCTGCTGGATGCGCATCGTGAAGTCAACATGTCTTCAGATGATAATAATGGCCAGAGCCAAGCACCTTCTTTTGCTGGGGTCCCACCCTCAGGGATGCCACCGCCTTTTATGGGACCACCAGGAATGCCGCCTCATTATCCACCAATGGGAATGCCACCCATGGGACAGAGGCCTCCCAACATGGCTCCCATGCCACCTGGTATGATGCCACCTGGCATGATGCCACCAATGGGAGGGCCACCCATGGGACAGATGCCAGGCATGATGCCACCTATGATGCCTGGGATGATGATGCCACCTCGCATGCCAGCTGCGACGATGCAGCCAACAGGACCGCCTGGAGTGGACACAACTGTCATCGCTATGCCTGGAACAGTTGGTACCACAAATGGCTCGCCACAGGATGACCAACCAAAGAATAAGTCTGTGTGGACAGAACATAAGTCCCTGGATGAGAagacctactactacaacacagagacCAAGCAGTCTTCCTGGGAAAAGCCAGACGACCTGAAATCTCCTGCAGAACAAATGCTGTCTAAATGCCAATGGAAGGAGTACAAATCAGACAATGGGAAGGCGTACTACTACAACTCCCACACTAAGGAGTCCCGGTGGACCAAACCCAAAGAGCTTGAAGATCTGGAAGcCATGATAAAAGCTGAGGAGAATGGGATGGCGGAGGTGGGTGCTCCTGGCACTGTCATCATCACCCCCAACCATCAGCTCGACAGCGTTGCTTCGATGGCGACCATGATGATGGAAATGCCGGCCATGAGGCCAGCTCCAACCGTCTCAGTGGAACAGATGTCCCTGGTGCCCATGCTTGTAGCTGAGGTCAACGCTGACTCGCCTGTCAACTCCACAGAGGACTTGGCCGGCATGGAGGCCTCAGCCAGTAATGACGCCTCAAAAGAGGAGAGGCCAGAGCTGGTGAAGAAAACGTACAAGTGGAACACGAAAGAAGAGGCCAAGCAGGCCTTCAAAGAGCTCCTGAAGGAGAAGGGCGTTTCATCCAATGCGTCTTGGGAACAAGCCATGAAAATGATCATCAATGACCCACGCTACAGTGCTCTGCCGAAGTTAAGTGAGAAAAAGCAGGCCTTCAATGCTTACAAGGTGCAGacggagaaagaggagaaggaggagactaGGATCAAGTACAAGGAATCCAAGGAAATGTATCAGCGATTTTTGGAAAACCACGAGAAAATGACATCTACAACCAGATATAAGAAAGCAGAGCAGATGTTTGCGGAGCTCGATGTGTGGAGCACCGTCCCAGAGAGGGACAGACTGGAGATCTATGAAGACGTCCTGTTCTACCTAGCCAAGAAGGAGAAGgagCAAGCCAAGCAGCTGAGGAAGAGGAACTGGGAGGCTCTGAAGAACATCCTGGACAACATGGCCAACGTGACGTACCGCACCACCTGGTCCGAGGCCCAGCAGTACCTGCTGGACAACCCCACCTTCGCAGAGGACGAGGAGCTCCAGAACATGGACAAAGAGGACGCTCTGATCTGTTTCGAGGAGCACATCCGAGctctggagaaggaggaggaggacgagaagCAGAAGACACtgctgagggagaggaggagacagcgCAAGAACAGAGAGTCCTTCCAGaaattcCTGGATGAGCTCCATGACAACGGTCAGCTCCACTCCATGTCTGCGTGGATGGAGATGTACCCCACCGTCAGCTCAGACATCCACTTCGCCAACATGCTGGGCCAGCCAGGCTCCACTCCCCTCGATCTGTTCAAGTTCTACGTGGAAGACCTGAAGGCTCGCTACCACGACGAGAAGCGGATCATTAAGGATATCCTGAAGGACAAAAACTTCTTGGTGGAGGTAAACACTAGCTTTGAAGACTTTGGCACTGTGATCAGCTCAGACAAGAGAGCCACAACGCTGGACGCAGGCAACATCAAGCTAGCCTTCAACAGCTTGCTGGAGAAGGCAGAGGCtcgggagagggagcgggagaaggAGGAGGCCAGGAAGATGAAGAGGAAAGAGGCTACCTTCAAGAGCATGTTGAAGCAGGCTACCCCAGCCCTGGAACCAGAGGCAACCTGGGAAGAAGTCCGAGAAAGATTCCTCAAAGAATCTGCATTCGAAGACGTGACTCTGGAGTCTGAGAGGAAAAGGATATTCAAAGACTTCATGCATGTCTTGGAGCACGAGTGCCAGCATCATCACTCCAAGACCAAGAAACACTCAAAGAAGTCCAAGAAGCACCACAGGAAGCGCTCCCGCTCTCGATCGgGCTCAGAGTCTGAAGGCGAAGACGATTATCACACCAAGAAGAAGAAGCGCTCACAGTCCAAGTCCCCGTCCGAGCGCTCCTCCAGTGGGGAATCTGATAGAAGTTATAAGAAGTCCAAGAAGCACAAGAAGAAGGGGAAGAAGAGGCGTCACAAGTCGCAATCTCCTGAATCCGAAGGCGAGcggaaagagaagggaggaagagagagggacggCAAGCGGGAGAAGGaccaggagaaagagaaagagaacgacAAGTCCCGGGGGAAGAGTCGCTCCGAATCCAAGCAGAAGTCACCTAAAAGGAAATCTACCAAGGAGGAGGGTGGCTGGGACACTTCAGGCAGCGAGCTGAGTGAAGGAGagctggagaagaggaggaggactctACTGGAACAGCTGGATGCTCCTTGATCCTGTTTTTCCTCATGCTTCCTTTCATCCACCATAGATTCCCCCCGGTGCTTATTTTTCAGCGTAATGCCACACATGCTTGGACTTAAGGTTATACAATTCCGGTAACTTTCCCAAACTTCACAggtttttccagaaatcccagttaGAAGATTTGCTTAATTCCTGCCAATTTTTGTCTAAGTTACCAGAATGTTTTCAACCCTTTTTGGACTGTGTGTGAACTATTCCCCTTGTGTTTTGTATAATGGGAATGAACCCGACACCCTGGCACTAGAATGCTTGGTAAATATTTGCTCTGTTTTCTTACGTTATTGGAAGTGGTCACAGGCTGAGTTGAGTGACTACTTTGATATCAGGTCAACTGTGTGGACATTTAGTGACACACTTCAGAAATGTGTTGCCTTTTTTATAATGTTTTCTCGCTAgctattttatttgttttgtagTTGTTTGATATCGAAATGGATTCAAAGAGCATCTTAATGCCATGCTCTTTACTGTGACTGCCTTGCAGTTCTCAGTACAATTCTTATCCGAGTCACAAATGGCACTGTatttattccctttatagtgcactacttttgactagggccctcaaagtaaaaaaatgtatacaaatttAGTTTAGGAAATCTGACAAAATATCCAGCAAATAAAAAGAGATGTGATTGTGTCTCAgtgtaatcaaggtttgaaattattttcaaataaaataaatacatttttgtgcTTAGTTGTgctcaatttgcagtgtacaaattttAATGATTTTCCGGACCTCCGACCATCCGCTCCGACAAAAAAATTGCCCCGCAGCTGAATCTCGTTGCATACCGCTGCTTTGGACTGAGGTAGAACTCTTTGGCAAAGGTCCACGTCTAGACTGAAGTAAATGTCTCTCTGAAACAAGActctttaaaatacattttttatggtATTTTTAGGATTGGTTCGCTAGATTTTCACGAGAGGAATTGTGAAAGTCCTCGTTGCATGATCTATAAATGTAATAAAATACAGTTGACATGAATTTGTTTGTCTTCATGTACCATCACCAGCAGCCACCATAGATCGGAGCTCATTATTTTCTGTACATATGACCTCTCTGTTATGAGTGCCTCTTGTTCACTAGGCTTAGTAGCCTTGTATCCGTTTCCTGTGGATCATTGCAATGCTAGGCAGGCTGAAGGTAATAATTGCTACTGTAAGAGGGAGTGCCCGAGACAACGTGGCTCAGGACAATCTAGATTAAGCTCCAATAACATCACCAGGGCTGTGGCACGGTTGCCGAAGACCGCCAGAAGTGGCAAATCCAAACCTTTGTTGCTGCCCGATGCCCCAAGCCCGCCAGACGGGCGAGTAAAGATTTCCACAGTTTACATACACGGAGATGACAAGACCGACTTCTCCTGTTGTTTTCATATCAATGAGCATGCATAGAAAACCAGAGTGAATCTGAACAGCTGTCTGCCAAAATGAATTGAAATAAAGATGCACACG

Function

NR:

description
pre-mRNA-processing factor 40 homolog A-like isoform X2

GO: NA

KEGG:

id description
K12821 PRPF40, PRP40; pre-mRNA-processing factor 40

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021597021.2 False 4190 mRNA 0.48 26 46546837 46582126
XM_036974306.1 False 4176 mRNA 0.48 27 46546837 46598946
XM_021597019.2 False 4385 mRNA 0.48 28 46546837 46599077
XM_021597020.2 True 4367 mRNA 0.48 28 46546837 46599080

Neighbor

gene id symbol gene type direction distance location
LOC110504150 LOC106586158 coding downstream 211629 46078061 ~ 46335208 (-)
LOC110520037 pyr5 coding downstream 498978 46043940 ~ 46047859 (-)
LOC110520036 LOC106586156 coding downstream 512410 46031482 ~ 46034427 (-)
LOC110520035 LOC106586155 coding downstream 522430 46020970 ~ 46024407 (-)
LOC110520032 LOC106586150 coding downstream 701793 45830930 ~ 45845044 (-)
rprma rprm coding upstream 119603 46718683 ~ 46721823 (-)
LOC110520047 LOC106586168 coding upstream 402727 47001807 ~ 47007117 (-)
LOC110520049 LOC106586170 coding upstream 539286 47138366 ~ 47145477 (-)
LOC110520051 LOC106586171 coding upstream 549264 47148341 ~ 47177648 (-)
LOC110520052 LOC106586172 coding upstream 589402 47188482 ~ 47228663 (-)
G264657 LOC106586160 non-coding downstream 109272 46434462 ~ 46437565 (-)
G264583 NA non-coding downstream 216847 46329741 ~ 46329990 (-)
G264582 NA non-coding downstream 217392 46329202 ~ 46329445 (-)
G264576 NA non-coding downstream 224536 46322102 ~ 46322301 (-)
G264571 NA non-coding downstream 229603 46316978 ~ 46317234 (-)
G264758 NA non-coding upstream 63259 46662339 ~ 46662639 (-)
G264763 NA non-coding upstream 72306 46671386 ~ 46671623 (-)
G264793 NA non-coding upstream 154154 46753234 ~ 46753710 (-)
G264883 NA non-coding upstream 234031 46833111 ~ 46833339 (-)
G264935 NA non-coding upstream 316748 46915828 ~ 46916800 (-)
G263274 NA other downstream 1009295 45536332 ~ 45537542 (-)
LOC110520012 cssa21h2orf88 other downstream 1442574 45099333 ~ 45104286 (-)
G262993 NA other downstream 1534588 45010172 ~ 45012249 (-)
G261580 NA other downstream 2515332 43989524 ~ 44031505 (-)
col6a3 LOC106598405 other downstream 4231479 42291728 ~ 42329627 (-)
G265988 NA other upstream 1000138 47599218 ~ 47599815 (-)
LOC110505248 gcg other upstream 1432967 48032036 ~ 48033434 (-)
G268310 NA other upstream 2896397 49495477 ~ 49495803 (-)
LOC118944672 NA other upstream 2903336 49494001 ~ 49503025 (-)
LOC110520112 LOC106586230 other upstream 2964768 49563841 ~ 49608114 (-)

Expression


Co-expression Network