rprma (rprm)


Basic Information

Item Value
gene id rprma
gene name rprm
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 46718683 ~ 46721823 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021597022.2
GAAGAGAACATTTGGAAAGGTATGCCAAAGCAGTTTGATACACACCAGAAGACCTATACCAGATTTAAAGGTGGCATTTCAATCTCCTGGTTCTCACTCTTAATTTTTTTCTGCGCTTGTGGGGAATTTTTCTGAAATTGCGCTTGAAAGTGCGCTTTTGGCTGTTATTTGTGGTGCCAACTGAACGTTGAAAAGTGGAGATGAATTCTACCGCTTTCAATCAAACGGAGAGCTCAGGACTTTTCAATAAGACTGAAGATATTTTTTGTTGTAACTTTTCATCAGTGGTGACTGATAATGGTTTCGTGGCGCCGACTCCGGATGAGAGAAGTCTCTTTCTCATGAGAGTTGTCCAGATTGCCGTTATGTGCGTGTTATCGCTCACGGTGGTTTTCGGTATATTCTTTTTGGGCTGCAACCTTCTCATTAAGTCAGAGGGAATGATCAACTTTTTGGTGACGGACAGAAGACCATCCAAAGAGGTAGAAACAGTCATTGTTGGGGCATATTAGTAGCCCAAAGAGCGCTTTTGGAGACTTTGTCAAAATGATTTGTCCTACCACTGATGCCCAGATGATTAATCCAGTTTTCACCAACAGCAGAGAGACGGAGCTCAATTTTCACATAAAATCCAGTCTCCATTGTTCATTTCTTGTCAGTTGACGAAAATGTAGGATCCAGCAGGTGACTGAACAGTCAGGGGACAAATTAGGGGTAGGGCTAAACATTTTAAGGACACACATCTCCAAGAAGTATATAGCCAAAATCATCTTTCACTTTTTGTTAAAGACAAACAAACAATGTCAATTGAATTGTACTATCATTTGAATTGGACGCACTAGATTGTTATAGCCTATTTGTCAACGTGACAATCGTTTTTTACTTCTAACACTTTCTCGTATTGCTAAAGCAATGGGGATGAATGAATGTTTTTGAAAAATACCTATGTGTTTTTGCATACAATATGCAAGTCAGTATTATGATTTAGTCAATGTGTCTAatgggtttcctattgaacatttgTAAATAGTGAGTGGTTAAATGCATGGAAGGTGGATATATAATAAAACAACAGTAGTTTATCTTTGtttattgaaataaattcatcatGTAATTATGTTGACGTTTTCAGTTTGAGCGATTCTGATTGTCCATCAATCTGCTCTGTGTTCATTTCAAACAATCATGGCCACAGTATGACTATTTCAGTTGTATTGAGATCATTCTGATTACAAAACCCTTCAAATGATAACATTTTATACTGTATCAATATATTAAACATGTACTGTTTATTATTTTAATATCACCACATTTATTTTTGCAGCATATTCTATTGAAAGTGTGGAAATGTCATAATTGACAGGGCACATTGAGAGAAAATGTGTGACATTAGCACCTTGTTGGAGATTGACTCTTGGAGCCCCCAATGGTGAACCACTGAAACCAATGTGATGAGCAAGGTTGCTTTTTCCAGGATTGATGTGTGACGTCCTAGTCCCATTGATCAGTCTGGGGTTTAATGGAAACCTGCCTGACAGTGTTCGTACCATATCAGATGCTCAGAAAACATATACACTCTAAATGATGGGTTAAAAAAACAACCCAACTATTCTTTAGTGTGTCGGATATTGTAGTGTGACCACATTTAGACCTCTCTTTGTCTGGGGACCTTGAACATGATTAACTCACAAATGCATGGTGTTATAACAATCCACTATATAGGACTTATCTTGGTTTGATCAATTCATTCTCTCTAATGTGGTGGTCTCCTGTTTTCTATAACACTCTTAGACATATGCACATGATTTCAATTCATTATATAAACATATTTTTtggggtgtttttttttttaacctttatttaaccaggcaagtcagttaagaacacattcttattttcaatgacggcctgggaacagtgggttaactgcctgttcaggggcagaacgacagatttgtaccttgtcagctcgggggtttgaactcgcaaccttccggttactagtccaacgctctaaccactaggctacgctgccgatGGTTTGAAATACATGTCATTTTACACACTATATGTATTGATTGCACTGCAGTCAGAGATTGTGACattttctccttctctgtctgtatTATGTAGTTGTTCCTGTATAGACCATAGTGTGGCTTCTCTCCCCTCAGTGAAagcatctgttgttctgccccccccccccccaccccagctTCCCCCAATGCAGCCCCCCGGGGGGAACCAAACAGTCCCTCCTCAAAAATGACTTGTCTTGTCAAATCAAACCAAGGAGGACTGCACTGCACAAACTGCTACACTCTGATAAGCCACCTGTGCCCCTGCTCCAATGGAACGGTGTTAAAGTTGAAAAGCGTCTAAAGTCGTTTCACTTCCTCCGAAATCACGCTTCCTGCCTGCCTTGCCGTCGAGGACAAATCAATCTGGTGACCCACCCTTTACAGTTTACTGAATCGCGTTTGACAAGGCCCATTAAGATGTGTTATGATTGATGGACGGCAGCATAGCCTACGGGGTGTGTCACCGGCCGAAGTCCCAAACCACTCTCTATCTCACCTAATAATTACACTTGAATGCTAGTGAGACATGAGTGTCATAACAAATAGAACATTTTGTTTGATAAATGTTCTCTCAAACTAATACTATATCATTAAGTATTTTGTGTGCAGCCATTACAGGTACTTCATGATATTCCCATTTGCCCTTGATAAAATCCTAAGCATAACAACTTTGATAGTATCTGATGCGTAAGTGTCAATTCGGTTGAATGAGATTATACATTCAACACCAACCTGAACTCAGTGAAGTTCAGTTAACCCAATGAAGTGTTACCCATTAGATGAAATGATCAGCCATCATAGAGATATGGATAATTAGATTACCCTGAACAAGTTAGTGGTAGCCAATGAGTTGTGGAAACTGATCCTATCTAAACTATGGAAAAATAATCTAGATGATTGTATTTATATAGCTTAAACTGTGTTTAGTATCATCCATGTATTAAGCCAGCTGATTTATAGACTGTATATTTTCATCCAAATATCTTCTCTCTTCCTGTATttaattgtattgtattataataGTCATTGCattattaaacatgtatttcATTTATTTGAA

Function

symbol description
rprm Predicted to be involved in regulation of mitotic cell cycle. Predicted to act upstream of or within regulation of cell cycle. Predicted to be integral component of membrane. Predicted to be active in cytoplasm.

NR:

description
protein reprimo A-like

GO: NA

KEGG:

id description
K10128 RPRM; reprimo, TP53-dependent G2 arrest mediator candidate

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021597022.2 True 3141 mRNA 0.39 1 46718683 46721823

Neighbor

gene id symbol gene type direction distance location
LOC110520042 LOC106586165 coding downstream 119603 46546837 ~ 46599080 (-)
LOC110504150 LOC106586158 coding downstream 383475 46078061 ~ 46335208 (-)
LOC110520037 pyr5 coding downstream 670824 46043940 ~ 46047859 (-)
LOC110520036 LOC106586156 coding downstream 684256 46031482 ~ 46034427 (-)
LOC110520035 LOC106586155 coding downstream 694276 46020970 ~ 46024407 (-)
LOC110520047 LOC106586168 coding upstream 279984 47001807 ~ 47007117 (-)
LOC110520049 LOC106586170 coding upstream 416543 47138366 ~ 47145477 (-)
LOC110520051 LOC106586171 coding upstream 426521 47148341 ~ 47177648 (-)
LOC110520052 LOC106586172 coding upstream 466659 47188482 ~ 47228663 (-)
LOC110520059 LOC106586177 coding upstream 1003451 47725274 ~ 47748055 (-)
G264763 NA non-coding downstream 47060 46671386 ~ 46671623 (-)
G264758 NA non-coding downstream 56044 46662339 ~ 46662639 (-)
G264714 NA non-coding downstream 163984 46544333 ~ 46554699 (-)
G264657 LOC106586160 non-coding downstream 281118 46434462 ~ 46437565 (-)
G264583 NA non-coding downstream 388693 46329741 ~ 46329990 (-)
G264793 NA non-coding upstream 31411 46753234 ~ 46753710 (-)
G264883 NA non-coding upstream 111288 46833111 ~ 46833339 (-)
G264935 NA non-coding upstream 194005 46915828 ~ 46916800 (-)
G264988 NA non-coding upstream 238539 46960362 ~ 46960564 (-)
G264990 NA non-coding upstream 239514 46961337 ~ 46961645 (-)
G263274 NA other downstream 1181141 45536332 ~ 45537542 (-)
LOC110520012 cssa21h2orf88 other downstream 1614420 45099333 ~ 45104286 (-)
G262993 NA other downstream 1706434 45010172 ~ 45012249 (-)
G261580 NA other downstream 2687178 43989524 ~ 44031505 (-)
col6a3 LOC106598405 other downstream 4403325 42291728 ~ 42329627 (-)
G265988 NA other upstream 877395 47599218 ~ 47599815 (-)
LOC110505248 gcg other upstream 1310224 48032036 ~ 48033434 (-)
G268310 NA other upstream 2773654 49495477 ~ 49495803 (-)
LOC118944672 NA other upstream 2780593 49494001 ~ 49503025 (-)
LOC110520112 LOC106586230 other upstream 2842025 49563841 ~ 49608114 (-)

Expression


Co-expression Network