Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110505248 |
| gene name | gcg |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 48032036 ~ 48033434 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| gcg | Enables gastric inhibitory polypeptide receptor binding activity and identical protein binding activity. Predicted to be involved in several processes, including positive regulation of bicellular tight junction assembly; positive regulation of insulin secretion involved in cellular response to glucose stimulus; and protein kinase A signaling. Predicted to act upstream of or within negative regulation of execution phase of apoptosis; positive regulation of gluconeogenesis; and positive regulation of histone H3-K4 methylation. Predicted to be located in cytoplasm. Predicted to be active in extracellular space. Implicated in Alzheimer's disease and prediabetes syndrome. |
| description |
|---|
| glucagon-1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021584355.2 | False | 746 | mRNA | 0.50 | 4 | 48032036 | 48033434 |
| TU302595 | True | 574 | TUCP | 0.51 | 5 | 48032047 | 48033302 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118958137 | NA | coding | downstream | 102231 | 47922735 ~ 47929805 (-) |
| LOC110520064 | NA | coding | downstream | 113741 | 47870869 ~ 47918295 (-) |
| LOC110520063 | LOC106586182 | coding | downstream | 170839 | 47855716 ~ 47861197 (-) |
| LOC110520061 | NA | coding | downstream | 183844 | 47749249 ~ 47848192 (-) |
| LOC110520059 | LOC106586177 | coding | downstream | 284421 | 47725274 ~ 47748055 (-) |
| fap | LOC106586187 | coding | upstream | 315 | 48033749 ~ 48045947 (-) |
| LOC110504154 | ifih1 | coding | upstream | 12274 | 48045708 ~ 48059730 (-) |
| LOC118958229 | NA | coding | upstream | 32059 | 48065493 ~ 48066503 (-) |
| LOC118958240 | LOC106586190 | coding | upstream | 45667 | 48079101 ~ 48097689 (-) |
| LOC110520070 | LOC106586190 | coding | upstream | 80800 | 48114234 ~ 48170057 (-) |
| G266186 | LOC106586184 | non-coding | downstream | 88852 | 47941508 ~ 47943184 (-) |
| G266182 | NA | non-coding | downstream | 110892 | 47920869 ~ 47921144 (-) |
| G266169 | NA | non-coding | downstream | 140457 | 47890398 ~ 47891579 (-) |
| G266359 | NA | non-coding | upstream | 40632 | 48074066 ~ 48075575 (-) |
| G266360 | NA | non-coding | upstream | 43146 | 48076580 ~ 48076886 (-) |
| G266362 | NA | non-coding | upstream | 44365 | 48077799 ~ 48079009 (-) |
| G266416 | NA | non-coding | upstream | 110088 | 48143522 ~ 48143729 (-) |
| G265988 | NA | other | downstream | 432221 | 47599218 ~ 47599815 (-) |
| G263274 | NA | other | downstream | 2494494 | 45536332 ~ 45537542 (-) |
| LOC110520012 | cssa21h2orf88 | other | downstream | 2927773 | 45099333 ~ 45104286 (-) |
| G262993 | NA | other | downstream | 3019787 | 45010172 ~ 45012249 (-) |
| G261580 | NA | other | downstream | 4000531 | 43989524 ~ 44031505 (-) |
| G268310 | NA | other | upstream | 1462043 | 49495477 ~ 49495803 (-) |
| LOC118944672 | NA | other | upstream | 1468982 | 49494001 ~ 49503025 (-) |
| LOC110520112 | LOC106586230 | other | upstream | 1530414 | 49563841 ~ 49608114 (-) |
| LOC110520119 | NA | other | upstream | 1833783 | 49867187 ~ 49871681 (-) |
| LOC110520121 | LOC106581751 | other | upstream | 1866739 | 49895327 ~ 49901575 (-) |
