LOC118958240 (LOC106586190)


Basic Information

Item Value
gene id LOC118958240
gene name LOC106586190
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 48079101 ~ 48097689 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036974346.1
ACTTAACCCAatctactctctcgctctctactcaCCAGGGAAGAATGACATCTTTGGAGAAATGATCCATCTGTACTCCAAGCCTGGGAAGTCCAATGCGGACGTCAGAGCCCTGAGTTACTGTGACCTGCACACGATCCAGAGGGAAGATCTCTTGGAGGTGCTTGACATGTACCCTGAGTTCGCAGATTTTTTCCGGAAAAATCTGGAGCTGACATTTGACCTCAGAGACGAGAATGGCAAGGCTGCGTATTCTCACGTTAGTGATTCCGATCCAGAAGATGTTAAGAGCACAAAGAGCGCAAGAAGAATCTCCTTCACACCACATCCAACTAAAGGAGGAAGCAACAAGGAAACGGAAAACAGCTCGGAGAGGGAGTCCTACTCAGGACTAAAGAGAGCTTCAGTTGACCTGAAACACTCagggaaggaggagcagaggtCCCTGGGGCCAGCCATCCAGGGGTGTCCCTCGGTGGAAGACCCTGCACTGGGGCTCGACTCCAGTAACACCAGAGACATCCAGGCACGAGACAGCATGGAGAGAACTCCCTCTTATGACAATAACATTGATGTGTGCAATGACAAATGGGACTGCGAGAAGCCCCAAGACTACCTGGATGAGTCAGCACAATTGCAGGACCTGAGGGGCGAGGATGACGACACCAGTGAAATTACATACGGAGAGGTGGAGCATCGCTTAGATCAGCTCCAAGAGCACTTAAACAGATTGGAGTCCCAGATGACATCAGATATTCAGACCATCCTGCAGCTCCTGCAGAGGCAGTCTACCCTGGGACCTCCTGCCTATAGCACTGTGACTGCCAGTCCAGACTATCAAAGGCCTGCAGTTAGGGGTCAGCCAATCGCTGCTTTGACCAGCAGCCATTGCTTCAGCCATTCATCACCACAAAGTCCTGAACTTAACTTGGAGAGGAGCCATCAGGAATTCAAAGACTCGGTGTCAGGCTTGGCTTATATGGATGATTCACCCAGAGAGGACAGCCTTACAGTACTACTTgtgcaaagacacacatacaacAAACCCAACACGGGGCATCAGCATTCCAAATCTAGGCCAGtctcagacccagggcctccaagGCCATAGagctacactaccggtcaaaagttttagaacacctacccattcaagggtttttctttgtttttactattttctacattgtagaatagtaatga

Function

NR:

description
potassium voltage-gated channel subfamily H member 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036974346.1 True 1203 mRNA 0.50 6 48079101 48097689

Neighbor

gene id symbol gene type direction distance location
LOC118958229 NA coding downstream 12598 48065493 ~ 48066503 (-)
LOC110504154 ifih1 coding downstream 19371 48045708 ~ 48059730 (-)
fap LOC106586187 coding downstream 33154 48033749 ~ 48045947 (-)
LOC110505248 gcg coding downstream 45667 48032036 ~ 48033434 (-)
LOC118958137 NA coding downstream 149296 47922735 ~ 47929805 (-)
LOC110520070 LOC106586190 coding upstream 16545 48114234 ~ 48170057 (-)
LOC110520071 LOC106586191 coding upstream 136131 48233820 ~ 48269471 (-)
LOC110520072 LOC106586192 coding upstream 255720 48353409 ~ 48399492 (-)
LOC110520074 LOC106586194 coding upstream 302141 48399830 ~ 48448287 (-)
slc38a11 slc38a11 coding upstream 350709 48448398 ~ 48453258 (-)
G266362 NA non-coding downstream 92 48077799 ~ 48079009 (-)
G266360 NA non-coding downstream 2215 48076580 ~ 48076886 (-)
G266359 NA non-coding downstream 3526 48074066 ~ 48075575 (-)
G266186 LOC106586184 non-coding downstream 135917 47941508 ~ 47943184 (-)
G266416 NA non-coding upstream 45833 48143522 ~ 48143729 (-)
G266425 NA non-coding upstream 59825 48157514 ~ 48157785 (-)
G266428 NA non-coding upstream 64090 48161779 ~ 48161997 (-)
G266518 NA non-coding upstream 131833 48229522 ~ 48229761 (-)
G265988 NA other downstream 479286 47599218 ~ 47599815 (-)
G263274 NA other downstream 2541559 45536332 ~ 45537542 (-)
LOC110520012 cssa21h2orf88 other downstream 2974838 45099333 ~ 45104286 (-)
G262993 NA other downstream 3066852 45010172 ~ 45012249 (-)
G268310 NA other upstream 1397788 49495477 ~ 49495803 (-)
LOC118944672 NA other upstream 1404727 49494001 ~ 49503025 (-)
LOC110520112 LOC106586230 other upstream 1466159 49563841 ~ 49608114 (-)
LOC110520119 NA other upstream 1769528 49867187 ~ 49871681 (-)
LOC110520121 LOC106581751 other upstream 1802484 49895327 ~ 49901575 (-)

Expression


Co-expression Network