LOC118936376


Basic Information

Item Value
gene id LOC118936376
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 48879849 ~ 48881507 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036964913.1
TTCCCCAGAGTGATCTCTGCCATTGTGATCAGTGGGAAGGCACTGGGAAAAGCTTTCTCATTAAGCCACAGATTATGCCAAAACCAGATTACAGCTGCCCAGTTGTTCAAACTGTTGATGAGAGAAACGTGTCTAAATTTTTCCATTACAAATTCAATTTATTCAATCAGACATTTTCAGGAAAATTTGGTGTGTAATAATGCCATGCCCTCTCTCCAGGAGCATTTAAAAAAAGGGGGGTTAAAATTCATGAACTGCAAGTTCACCTATCCAACCCGGACTGACATCCAGGTGTTACATGGACTACTGGTGTCTTTGAAGCCGGGCCAGAACCTGACCTTTGTGGGCAGCAGTGGCTATAGGAAGAGCACTAGTGTACAGCTGTGGGAGAGGTTCTATGATCTAGATGAGGGCAGATTGATTGATGGCTGTCCATCACACACTGTCAACGTGCCCTTCCTGAAGGCTCAGATTAGCATTGTCTCCCAAGAACCAGTGCTGTTTGACTGTGGTATTGCTGAAAATATCCAGCATGATGATAACACAAGGAACGTGAGCATGGTGGAGATTGTTGAAGCTGCCAAGAAAGCTCATCTCCAATACTTTGTGATGACTCTACCAGATGTGAGTAGTGTAACTGAAATTGTACTATCTTTTGTAATACTTCTATGTCATAATATCCCACTTCACTTTGTACTGTGGCGAATGTCAAAGATGAATATTTTATTGTGGTGGGAACATGTTATTATCTTCTGATACTGTTTGCTCTCATTGTATTGTAAGTACTGTACTGGACATTCCTGTGTTTGACTATCGCCAATAGAAACTCAAGATTCTGGTACTGGATGAGGCCACCTCTGCATTGGACACAGAGAGTGAAAAGGTTCCCAGATAGCATAGCCGTCATGTCCCAAGGCGCTGTCATAGAAAGAGGGACTCATGAGAAATTCATGGCTGAGAGAGCTATCTACTTTAGAAATCTTTATACTCTCTTTGGATAATTCATTCCAATCATTTAAAAGTTAACAGCAGGTATTTTGCATAAACTAGTCACAGCAGGGGCTCCAATCAGCTAAACCAAATTTTTCTAGAGATGGGATGCATTACGAGGAGATGGAGTTTGTCACTAACCAAAGTACATCTATGTGATATTTTTATGATACATGTGGAATAACTATAGACTAAACATCAAAGTCCATggcgggaagtattcagaccgcttaaTTTCTTACAAattctgttacattacagccttattctaaaatggaatacattttttaaaatcctcatcaatccacacacaatagcccataatgacaaagcaaaaacaggtttttagaatttgtgcaaatgtattaaaaatacaaaacagatAACTTATTTACATTCAGACCGTTTGCTAAGAGACTTAAGAttttgctcaggtgcatcctgtttccattgatcatccttgagctgtttctacaacttgattgaagtccacctgtgataaatgtAATTGTTTGGAcaata

Function

NR:

description
PREDICTED: bile salt export pump

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036964913.1 True 1512 mRNA 0.39 2 48879849 48881507

Neighbor

gene id symbol gene type direction distance location
LOC118958775 NA coding downstream 5953 48859331 ~ 48873896 (-)
LOC110520082 LOC106586202 coding downstream 55217 48798439 ~ 48824632 (-)
LOC110520077 LOC106586199 coding downstream 269488 48578036 ~ 48610361 (-)
slc38a11 slc38a11 coding downstream 426591 48448398 ~ 48453258 (-)
LOC110520074 LOC106586194 coding downstream 431562 48399830 ~ 48448287 (-)
LOC110504168 LOC106581787 coding upstream 557 48882064 ~ 48887719 (-)
LOC110504179 LOC106586206 coding upstream 24904 48906411 ~ 48966442 (-)
LOC118958916 NA coding upstream 164816 49046323 ~ 49047613 (-)
LOC110520089 NA coding upstream 166197 49047704 ~ 49051068 (-)
ccdc173 ccdc173 coding upstream 175536 49055465 ~ 49075170 (-)
G267939 NA non-coding downstream 21225 48856313 ~ 48858624 (-)
G267890 NA non-coding downstream 98349 48781285 ~ 48781500 (-)
G267888 NA non-coding downstream 99492 48777514 ~ 48780357 (-)
G267886 NA non-coding downstream 104450 48775030 ~ 48775399 (-)
G267885 NA non-coding downstream 104969 48774548 ~ 48774880 (-)
G267990 NA non-coding upstream 104850 48986357 ~ 48986607 (-)
G267991 NA non-coding upstream 105356 48986863 ~ 48987116 (-)
G268042 NA non-coding upstream 165267 49046774 ~ 49048127 (-)
G268093 NA non-coding upstream 250440 49131947 ~ 49134168 (-)
LOC110505248 gcg other downstream 846547 48032036 ~ 48033434 (-)
G265988 NA other downstream 1280034 47599218 ~ 47599815 (-)
G263274 NA other downstream 3342307 45536332 ~ 45537542 (-)
LOC110520012 cssa21h2orf88 other downstream 3775586 45099333 ~ 45104286 (-)
G262993 NA other downstream 3867600 45010172 ~ 45012249 (-)
G268310 NA other upstream 613970 49495477 ~ 49495803 (-)
LOC118944672 NA other upstream 620909 49494001 ~ 49503025 (-)
LOC110520112 LOC106586230 other upstream 682341 49563841 ~ 49608114 (-)
LOC110520119 NA other upstream 985710 49867187 ~ 49871681 (-)
LOC110520121 LOC106581751 other upstream 1018666 49895327 ~ 49901575 (-)

Expression


Co-expression Network