dync1i2a (LOC106586225)


Basic Information

Item Value
gene id dync1i2a
gene name LOC106586225
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 49368762 ~ 49390595 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036974413.1
ATTATGATTAGTAGGTCTTTGTTTTTTCAAATATATTTTCTGTAGGGTAAATGGAATTGTACACCCTCTTGGATCCAAATCATAGTATTGCGCGCAGATCAATTATCAGGACTTGGACATGCATCTCTCTCAAATGATCTCTCCACCAACAATTATCTTTATCGCCAGCCACTGGGATCTTACTACCTTGCGCAGACAGTGCTCCCCACTGGAGCAGTAAACTCATTGCAAGCAAATCGGCTGCGGATATCAATCTAGATGTCCCTCTTCGGCATTCGTAATTCCGCATTGGTTGTGTTGGCAAATTTAGGAAAGGATCCCGGGTTCCTGATTCAAGGGATTGGAAAGCTTAGGAGAAACCAGTGTTGGCATCATGTCAGACAAAAGCGAGCTAAAAGCGGAACTTGAAAGGAAGAAGCAACGCCTGGCTCAGATCAGGGAGGAGAAAAAAAGGAAGGAAGATGAGCGCAAAAAGAAAGAGGCTGACTCGAAGAAAGATGCAGCCCCAATGGATGACTCCGACTTGGAGAAAAAGAGACGTGAGACAGATGCCCTTCTGCAGAGCATGGGCATCACGTCAGCTGATGTTCCTGTTGTCCCTCCTCCCATGTCTCCAACCTGCAAATCCGTGGGCACACCAAGCGAGGCAGGGAGCCAAGACTCGGGCGACGGCGCCGTGGGACCCAGGACTCTCCACTGGGACTCTGACCCGTCCACTCTTCAGCTTCACTCTGACTCTGAGCTGCGGCGGGGACCTCTGAAGATGGGCATGGCCAAGATCACCCATGTTGACTTCCCTCCAAAAGAGACTGTGTCGTACACCAAGGAGACCCAGACACCTGTGATAACCCAGCAGAAAGAAGaggaagaagaagaggaggaggaagttgCTCCACCACAACGAGTGCTTGAGGCCCAAACAGAGAAACCTGTCCAGAAAGAGGATGAGGAAGCACCTCCGCAAGAGCTGACCGAGGAGGAGAAGCTGCAGATCCTCCATTCTGAGCAGTTCATAACCTTCTTTGACCACAGCACCCGCATCGTGGAGCGGGCCCTGTCTGAACATGTGGACGTCTTCTTCGACTACAGTGGTCGcgagatggaggagaaggagggTGAGATCCAGGCAGGGGCCAAGCTGtttctgaacaggcagtttatGGACGAGCGCTGGTCCAAGCACCGTGTGGTCACCTGTCTTGACTGGTCCGCTCAGTATCCTGAGCTGCTGGTTGCCTCATACAACAACAACGAGGAAGCCCCCCACGAGCCGGACGGGGTGGCCCTGGTCTGGAACATGAAGTACAAGAAGAACACGCCGGAGTACGTCTTCCACTGCCAGtctgCAGTGATGTCGGCCGCCTTTGCCAAGTTCCACCCTAACCTGGTGGTGGGGGGCACCTACTCAGGGCAGATCGTTCTGTGGGACAACCGGAGCAACAAGAGGACCCCTGTACAGAGGACCCCCCTGTCGGCCGCAGCACACACGcACCCAGTGTACTGTGTGAACGTGCTGGGCACCCAGAACGCCAACAACCTCATCAGCATCTCTACCGACGGCAAGATGTGTTCCTGGAGCCTGGACATGCTGTCTCAGCCGCAGGACAGCCTGGAGCTGGTGTTGAAGCAGTCGAAGGCCGTCGCTGTCACCTCCATGTCGTTCCCCCTTGGGGATGTCAACAACTTTGCGGTGGGGAGCGAGGATGGTTCCGTCTACATGGCGTGTCGTCATGGAAGTAAAGCAGGGATCAGTGAGATGTTTGAGGGCCACCACGGGCCTATCACAGGGATAGACTGTCACACAGCGACCGGGCCCGTCGACTTCTCCCACCTGTTTGTCACCTCCTCCTTCGACTGGACCGTCAAGCTGTGGAGCACTAAGAACAACAAGCCGCTGTACTCGTTCGAGGACAACTCGGATTACGTCTACGACGTCATGTGGTCTCCCACTCACCCGGCGCTGTTTGCGTGTGTGGATGGAGTGGGCCATCTTGACCTGTGGAACCTCAACAACGACACTGAGGTTCCTACAGCCAGTACCACAGTGGAGGGGAACCCAGCCCTGAACCGCGTGCGATGGGCCCATTCCGGCAAAGAGATTGCCGTGGGAGACTCTGATGGACAGATTCTGGTCTATGATGTTGGAGAGCAAATCGCCGTTCCACGCAACGACGAGTGGACCCGTTTCGTCCGAACCCTGGCGGAGATCAACGAGAACCGGGACGACGCAGAGGAGCTGGCCGCTCAGCGCCTCTCTGCCTGATCGTCATGGAAACTCCAGTCTAGGGACCAGCAAAAGGCTTCATATTGTCAGCCTTGTTTTGATTGGAGGAAAAGACGCGATTTGCGACAGTGTTCAGGCGTGTGGACATCTTTTCTTTGGAAACATTGTAGTCAGATTTAATACACATAGCTACTTAACTGGGATAGCCTTCTACTTCGGCTGGTTTAAGTACACCAGTCTCCAATGGGATAACTAACAGGGCTATCTATCAACCTCAGACACTACAAGAAACAAAGCCATCTTCTTACTCTGCAATACAAATCAGTTGAACTCTTTTTCAACGACTCAAAAACCAGAATGCCTTAAAGGTACCATGTCTGAATCCATACGGTAGTGTTGTGGGTTTAGCTTCAGTTTCACAGGCCACTCAACTTGTTTGTGGTTACACCACCTTGAGCATGTGTTTGCTGTCCTCATGATTGCTGTTCACCATCTGTGCTTCGATGCCCGTGTCCACTTCAACTGCAGTAGACCCATCACTACACACAGGAATGTAGTGGTCTCATCATACATCAGCCAGTGTTTTTCTATGTTCCTTTAACCTAGATGCACAAGATCTCCACTTGTTTTTGTAATATATGGACAATTGTAACCTTCAACTTGACTATTGCTCTTAAACTAAATTTGACACTTAAGATATCAGAACCAGAATCTTTAGAAGTTTGAGGGAGAACTACCTGAAGATATTATGCTGTATTGGAAAATTGCTTAATGTGTAGTATGAATTCAGTATCCATACTTTATGGCGCGTCTAAGCAAAAGTGTAACTTTTTGTGACCTAGATATTACAGAGAATGTCTTCCACGAATCTCAATGTACTTTTTTCACAATTAAAATTAAGCCATTTTGATTTATTTCAACAAAATACAATAGATACATTTAAATGATTTTCCAAAACCCTGGTCATGATTTCAAAATAAATACTTTCGAAAA
>XM_036974415.1
TCTTTGTTTTTTCAAATATATTTTCTGTAGGGTAAATGGAATTGTACACCCTCTTGGATCCAAATCATAGTATTGCGCGCAGATCAATTATCAGGACTTGGACATGCATCTCTCTCAAATGATCTCTCCACCAACAATTATCTTTATCGCCAGCCACTGGGATCTTACTACCTTGCGCAGACAGTGCTCCCCACTGGAGCAGTAAACTCATTGCAAGCAAATCGGCTGCGGATATCAATCTAGATGTCCCTCTTCGGCATTCGTAATTCCGCATTGGTTGTGTTGGCAAATTTAGGAAAGGATCCCGGGTTCCTGATTCAAGGGATTGGAAAGCTTAGGAGAAACCAGTGTTGGCATCATGTCAGACAAAAGCGAGCTAAAAGCGGAACTTGAAAGGAAGAAGCAACGCCTGGCTCAGATCAGGGAGGAGAAAAAAAGGAAGGAAGATGAGCGCAAAAAGAAAGAGGCTGACTCGAAGAAAGATGCAGCCCCAATGGATGACTCCGACTTGGAGAAAAAGAGACGTGAGACAGATGCCCTTCTGCAGAGCATGGGCATCACGTCAGCTGATGTTCCTGTTGTCCCTCCTCCCATGTCTCCAACCTGCAAATCCGTGGGCACACCAAGCGAGGCAGGGAGCCAAGACTCGGGCGACGGCGCCGTGGGACCCAGGCGGGGACCTCTGAAGATGGGCATGGCCAAGATCACCCATGTTGACTTCCCTCCAAAAGAGACTGTGTCGTACACCAAGGAGACCCAGACACCTGTGATAACCCAGCAGAAAGAAGaggaagaagaagaggaggaggaagttgCTCCACCACAACGAGTGCTTGAGGCCCAAACAGAGAAACCTGTCCAGAAAGAGGATGAGGAAGCACCTCCGCAAGAGCTGACCGAGGAGGAGAAGCTGCAGATCCTCCATTCTGAGCAGTTCATAACCTTCTTTGACCACAGCACCCGCATCGTGGAGCGGGCCCTGTCTGAACATGTGGACGTCTTCTTCGACTACAGTGGTCGcgagatggaggagaaggagggTGAGATCCAGGCAGGGGCCAAGCTGtttctgaacaggcagtttatGGACGAGCGCTGGTCCAAGCACCGTGTGGTCACCTGTCTTGACTGGTCCGCTCAGTATCCTGAGCTGCTGGTTGCCTCATACAACAACAACGAGGAAGCCCCCCACGAGCCGGACGGGGTGGCCCTGGTCTGGAACATGAAGTACAAGAAGAACACGCCGGAGTACGTCTTCCACTGCCAGtctgCAGTGATGTCGGCCGCCTTTGCCAAGTTCCACCCTAACCTGGTGGTGGGGGGCACCTACTCAGGGCAGATCGTTCTGTGGGACAACCGGAGCAACAAGAGGACCCCTGTACAGAGGACCCCCCTGTCGGCCGCAGCACACACGcACCCAGTGTACTGTGTGAACGTGCTGGGCACCCAGAACGCCAACAACCTCATCAGCATCTCTACCGACGGCAAGATGTGTTCCTGGAGCCTGGACATGCTGTCTCAGCCGCAGGACAGCCTGGAGCTGGTGTTGAAGCAGTCGAAGGCCGTCGCTGTCACCTCCATGTCGTTCCCCCTTGGGGATGTCAACAACTTTGCGGTGGGGAGCGAGGATGGTTCCGTCTACATGGCGTGTCGTCATGGAAGTAAAGCAGGGATCAGTGAGATGTTTGAGGGCCACCACGGGCCTATCACAGGGATAGACTGTCACACAGCGACCGGGCCCGTCGACTTCTCCCACCTGTTTGTCACCTCCTCCTTCGACTGGACCGTCAAGCTGTGGAGCACTAAGAACAACAAGCCGCTGTACTCGTTCGAGGACAACTCGGATTACGTCTACGACGTCATGTGGTCTCCCACTCACCCGGCGCTGTTTGCGTGTGTGGATGGAGTGGGCCATCTTGACCTGTGGAACCTCAACAACGACACTGAGGTTCCTACAGCCAGTACCACAGTGGAGGGGAACCCAGCCCTGAACCGCGTGCGATGGGCCCATTCCGGCAAAGAGATTGCCGTGGGAGACTCTGATGGACAGATTCTGGTCTATGATGTTGGAGAGCAAATCGCCGTTCCACGCAACGACGAGTGGACCCGTTTCGTCCGAACCCTGGCGGAGATCAACGAGAACCGGGACGACGCAGAGGAGCTGGCCGCTCAGCGCCTCTCTGCCTGATCGTCATGGAAACTCCAGTCTAGGGACCAGCAAAAGGCTTCATATTGTCAGCCTTGTTTTGATTGGAGGAAAAGACGCGATTTGCGACAGTGTTCAGGCGTGTGGACATCTTTTCTTTGGAAACATTGTAGTCAGATTTAATACACATAGCTACTTAACTGGGATAGCCTTCTACTTCGGCTGGTTTAAGTACACCAGTCTCCAATGGGATAACTAACAGGGCTATCTATCAACCTCAGACACTACAAGAAACAAAGCCATCTTCTTACTCTGCAATACAAATCAGTTGAACTCTTTTTCAACGACTCAAAAACCAGAATGCCTTAAAGGTACCATGTCTGAATCCATACGGTAGTGTTGTGGGTTTAGCTTCAGTTTCACAGGCCACTCAACTTGTTTGTGGTTACACCACCTTGAGCATGTGTTTGCTGTCCTCATGATTGCTGTTCACCATCTGTGCTTCGATGCCCGTGTCCACTTCAACTGCAGTAGACCCATCACTACACACAGGAATGTAGTGGTCTCATCATACATCAGCCAGTGTTTTTCTATGTTCCTTTAACCTAGATGCACAAGATCTCCACTTGTTTTTGTAATATATGGACAATTGTAACCTTCAACTTGACTATTGCTCTTAAACTAAATTTGACACTTAAGATATCAGAACCAGAATCTTTAGAAGTTTGAGGGAGAACTACCTGAAGATATTATGCTGTATTGGAAAATTGCTTAATGTGTAGTATGAATTCAGTATCCATACTTTATGGCGCGTCTAAGCAAAAGTGTAACTTTTTGTGACCTAGATATTACAGAGAATGTCTTCCACGAATCTCAATGTACTTTTTTCACAATTAAAATTAAGCCATTTTGATTTATTTCAACAAAATACAATAGATACATTTAAATGATTTTCCAAAACCCTGGTCATGATTTCAAAATAAATACTTTCGAAAA
>XM_036974414.1
GGATTGGAAAGCTTAGGAGAAACCAGGTTTGTTACCAAACTACAAGTGAAACGTGGAGCGTacttttttgttttacatattgtTGCTAATAAAAACGTTTTGCGATTTAGTCGCCATGCCAGCCCTCCCGTTGTCTTTGAGTTGGCTGGCTAGCAGGCCGAGCTGACTCACTTGCACTTCATTGtgatatagctagctaacgttagttgagAATCTTAACTTTACAAGTGTTGGCATCATGTCAGACAAAAGCGAGCTAAAAGCGGAACTTGAAAGGAAGAAGCAACGCCTGGCTCAGATCAGGGAGGAGAAAAAAAGGAAGGAAGATGAGCGCAAAAAGAAAGAGGCTGACTCGAAGAAAGATGCAGCCCCAATGGATGACTCCGACTTGGAGAAAAAGAGACGTGAGACAGATGCCCTTCTGCAGAGCATGGGCATCACGTCAGCTGATGTTCCTGTTGTCCCTCCTCCCATGTCTCCAACCTGCAAATCCGTGGGCACACCAAGCGAGGCAGGGAGCCAAGACTCGGGCGACGGCGCCGTGGGACCCAGGACTCTCCACTGGGACTCTGACCCGTCCACTCTTCAGCTTCACTCTGACTCTGAGCTGCGGCGGGGACCTCTGAAGATGGGCATGGCCAAGATCACCCATGTTGACTTCCCTCCAAAAGAGACTGTGTCGTACACCAAGGAGACCCAGACACCTGTGATAACCCAGCAGAAAGAAGaggaagaagaagaggaggaggaagttgCTCCACCACAACGAGTGCTTGAGGCCCAAACAGAGAAACCTGTCCAGAAAGAGGATGAGGAAGCACCTCCGCAAGAGCTGACCGAGGAGGAGAAGCTGCAGATCCTCCATTCTGAGCAGTTCATAACCTTCTTTGACCACAGCACCCGCATCGTGGAGCGGGCCCTGTCTGAACATGTGGACGTCTTCTTCGACTACAGTGGTCGcgagatggaggagaaggagggTGAGATCCAGGCAGGGGCCAAGCTGtttctgaacaggcagtttatGGACGAGCGCTGGTCCAAGCACCGTGTGGTCACCTGTCTTGACTGGTCCGCTCAGTATCCTGAGCTGCTGGTTGCCTCATACAACAACAACGAGGAAGCCCCCCACGAGCCGGACGGGGTGGCCCTGGTCTGGAACATGAAGTACAAGAAGAACACGCCGGAGTACGTCTTCCACTGCCAGtctgCAGTGATGTCGGCCGCCTTTGCCAAGTTCCACCCTAACCTGGTGGTGGGGGGCACCTACTCAGGGCAGATCGTTCTGTGGGACAACCGGAGCAACAAGAGGACCCCTGTACAGAGGACCCCCCTGTCGGCCGCAGCACACACGcACCCAGTGTACTGTGTGAACGTGCTGGGCACCCAGAACGCCAACAACCTCATCAGCATCTCTACCGACGGCAAGATGTGTTCCTGGAGCCTGGACATGCTGTCTCAGCCGCAGGACAGCCTGGAGCTGGTGTTGAAGCAGTCGAAGGCCGTCGCTGTCACCTCCATGTCGTTCCCCCTTGGGGATGTCAACAACTTTGCGGTGGGGAGCGAGGATGGTTCCGTCTACATGGCGTGTCGTCATGGAAGTAAAGCAGGGATCAGTGAGATGTTTGAGGGCCACCACGGGCCTATCACAGGGATAGACTGTCACACAGCGACCGGGCCCGTCGACTTCTCCCACCTGTTTGTCACCTCCTCCTTCGACTGGACCGTCAAGCTGTGGAGCACTAAGAACAACAAGCCGCTGTACTCGTTCGAGGACAACTCGGATTACGTCTACGACGTCATGTGGTCTCCCACTCACCCGGCGCTGTTTGCGTGTGTGGATGGAGTGGGCCATCTTGACCTGTGGAACCTCAACAACGACACTGAGGTTCCTACAGCCAGTACCACAGTGGAGGGGAACCCAGCCCTGAACCGCGTGCGATGGGCCCATTCCGGCAAAGAGATTGCCGTGGGAGACTCTGATGGACAGATTCTGGTCTATGATGTTGGAGAGCAAATCGCCGTTCCACGCAACGACGAGTGGACCCGTTTCGTCCGAACCCTGGCGGAGATCAACGAGAACCGGGACGACGCAGAGGAGCTGGCCGCTCAGCGCCTCTCTGCCTGATCGTCATGGAAACTCCAGTCTAGGGACCAGCAAAAGGCTTCATATTGTCAGCCTTGTTTTGATTGGAGGAAAAGACGCGATTTGCGACAGTGTTCAGGCGTGTGGACATCTTTTCTTTGGAAACATTGTAGTCAGATTTAATACACATAGCTACTTAACTGGGATAGCCTTCTACTTCGGCTGGTTTAAGTACACCAGTCTCCAATGGGATAACTAACAGGGCTATCTATCAACCTCAGACACTACAAGAAACAAAGCCATCTTCTTACTCTGCAATACAAATCAGTTGAACTCTTTTTCAACGACTCAAAAACCAGAATGCCTTAAAGGTACCATGTCTGAATCCATACGGTAGTGTTGTGGGTTTAGCTTCAGTTTCACAGGCCACTCAACTTGTTTGTGGTTACACCACCTTGAGCATGTGTTTGCTGTCCTCATGATTGCTGTTCACCATCTGTGCTTCGATGCCCGTGTCCACTTCAACTGCAGTAGACCCATCACTACACACAGGAATGTAGTGGTCTCATCATACATCAGCCAGTGTTTTTCTATGTTCCTTTAACCTAGATGCACAAGATCTCCACTTGTTTTTGTAATATATGGACAATTGTAACCTTCAACTTGACTATTGCTCTTAAACTAAATTTGACACTTAAGATATCAGAACCAGAATCTTTAGAAGTTTGAGGGAGAACTACCTGAAGATATTATGCTGTATTGGAAAATTGCTTAATGTGTAGTATGAATTCAGTATCCATACTTTATGGCGCGTCTAAGCAAAAGTGTAACTTTTTGTGACCTAGATATTACAGAGAATGTCTTCCACGAATCTCAATGTACTTTTTTCACAATTAAAATTAAGCCATTTTGATTTATTTCAACAAAATACAATAGATACATTTAAATGATTTTCCAAAACCCTGGTCATGATTTCAAAATAAATACTTTCGAAAA

Function

NR:

description
cytoplasmic dynein 1 intermediate chain 2-like

GO:

id name namespace
GO:0007018 microtubule-based movement biological_process
GO:0005868 cytoplasmic dynein complex cellular_component

KEGG:

id description
K10415 DYNC1I, DNCI; dynein intermediate chain, cytosolic

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036974413.1 False 3217 mRNA 0.50 17 49368762 49390595
XM_036974415.1 False 3142 mRNA 0.50 16 49368777 49390595
XM_036974414.1 True 3082 mRNA 0.50 17 49369099 49390595

Neighbor

gene id symbol gene type direction distance location
LOC110520104 LOC106586222 coding upstream 421 49365942 ~ 49368341 (+)
dcaf17 dcaf17 coding upstream 3944 49357526 ~ 49364818 (+)
LOC110520099 gors2 coding upstream 67986 49296162 ~ 49300776 (+)
gad1a gad1 coding upstream 86798 49266948 ~ 49281964 (+)
LOC110520096 LOC106586217 coding upstream 111129 49255350 ~ 49257633 (+)
hat1 hat1 coding downstream 22897 49413492 ~ 49430082 (+)
dlx1a dlx1 coding downstream 74056 49464651 ~ 49470746 (+)
itga6a LOC106586229 coding downstream 139383 49529978 ~ 49557537 (+)
pdk1 pdk1 coding downstream 169490 49560085 ~ 49563837 (+)
LOC110520113 LOC106586233 coding downstream 238651 49629246 ~ 49676777 (+)
G267235 NA non-coding upstream 67207 49301268 ~ 49301555 (+)
G267099 NA non-coding upstream 83659 49283571 ~ 49285103 (+)
G267217 NA non-coding upstream 114548 49253953 ~ 49254214 (+)
G267214 NA non-coding upstream 117630 49250783 ~ 49251132 (+)
G267215 NA non-coding upstream 119148 49249433 ~ 49249614 (+)
G267308 NA non-coding downstream 56930 49447525 ~ 49447786 (+)
G267309 NA non-coding downstream 57953 49448548 ~ 49448806 (+)
G267315 NA non-coding downstream 63133 49453728 ~ 49453950 (+)
G267324 NA non-coding downstream 75278 49465873 ~ 49466114 (+)
G267347 NA non-coding downstream 105002 49495597 ~ 49495810 (+)
LOC110520046 LOC106586167 other upstream 2536518 46801058 ~ 46832288 (+)
G263859 LOC107588258 other upstream 3183958 46184134 ~ 46184804 (+)
G263733 LOC106586158 other upstream 3289337 46075484 ~ 46079425 (+)
G263710 NA other upstream 3434344 45934119 ~ 45934418 (+)
G263547 LOC106586150 other upstream 3529282 45838921 ~ 45839480 (+)
G267358 NA other downstream 120208 49510803 ~ 49512475 (+)
G267381 NA other downstream 163903 49554498 ~ 49555838 (+)
G267529 NA other downstream 446022 49836617 ~ 49855502 (+)
hoxd3a hoxd3 other downstream 771706 50162278 ~ 50184327 (+)
LOC110520146 ino80d other downstream 1211707 50601983 ~ 50618761 (+)

Expression


Co-expression Network