hoxd3a (hoxd3)


Basic Information

Item Value
gene id hoxd3a
gene name hoxd3
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 50162278 ~ 50184327 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021597218.2
TTTTCTCTGCATTCTGCTGCTATACCGTCCCCAACCAAAACGCTCAGCCTACACTCGCTCAAAATTTGCCTTATTATTGCCTGAATTAAAGTGTGAACCTACCAGATCCTCGATAACTATATAGTTATTTACTTGACTTGTCAGGGCTAGCGTTTCTTCCTGTGTGCATACCGAACATCGAAAGGAGAGCCTCTGCTGTTCATCATCCGTATAGTTTCACTGTAACATCATGTATTATTTATACAGAGTCACCACAAGAAAACACATGGATTACCCAACTGCATTAGGTCGAGGTGGATGTAACGATGAGCACGTGAAGAAAAATACGACACATATCTGCATAAAATACGGTCAAGGAATACAGAGGCGGTGGGAAACTCCAATCACGTGATACAAGAACACCCATGCCATTGGATAGGGCCTTGGTTTGaatcttcacaatgcagaaagctACATACTACGATAATTCTGGACTTTTTGGAAGCTACTCTTACCCCAAATCCGACTCATATATGTATGGCCCATCTCACCAGCCCTACCCCACTTCTAACCTTGAGAGTGATTATCAGGGTCCAGTTTGTCCAATACAAACCACAACTGTACGGCCACCAACTCATAAAGACAATGACATGAATGGCTGCATGCGACCAAGTAGCAGCCAAGGAAACACCCAACAGTCGAGTATTGGTGAACAGCCGCAGGCACCTCCATTGTCGGCATCTTCCCCTAACTCCAGCAACACTTCATCTCAGAAGAAGAAATCTCCCCCAAACAATGCTTCAAATACTGCCACCCCAGTCATTAACAAGCAAATTTTCCCATGGATGAAGGAGACGCGATCGAACGCCAAACAGAAAAGCAACAGCAGCAACAATTGTACAACTGCAgaagGTGAGTCCTGCGATGAAAAAAGTCCACCTGGTCCAGCCTCCAAACGGGTCCGAACTGCCTACACCAGTGCACAACTTGTAGAACTTGAGAAGGAGTTCCATTTCAACCGGTACCTGTGTCGTCCCCGAAGAGTGGAGATGGCTAATTTATTGAATCTCACTGAGCGCCAAATAAAGATCTGGTTTCAAAACAGAAGGATGAAATACAAAAAGGATCAGAAGGCTAAGGGGATAATGCACTCTCCCATCGGACACTCCCCGGACAGAAGCCCACCATTAAGTGGCCCAAATCACATTGGATATTCTGTAAATGTAAACAGCCTCAGCTATGATGCGCCCTCGCCCCCGTCATTCGCCAAACCCCAGCAAAACATGTACGGCTTGGCTGCGTACACGGCACCATTAGGTGGTTGCATACCGCAACAAAAAAGGTATCCGGGGTCCGAATACGAACACCACAGCATGCAAGGCAATGGTGGCTTTGCCAACGCTAATTTGCAAGGCAGTCCGGTGTACGTTGGGGGAAATTTCGTTGATTCCATGCCAGCCTCGGGCCCCATGTTCAACCTCGGCCatctccctcatccctcatctGCCAGCGTGGACTACAGCTGTGCCGCTCAGATTCCAGGCAACCACCACCATGGACCCTGTGACCCCCATCCCACATACACAGACCTCACCTCTCACCATGCGTCTCAGGGAAGGATTCAGGAAGCGCCTAAACTAACGCATTTGTAATTTGTGAGGAATCCATCTGTGTGCCCAAATTATGTTACGCTCTTTTATTACCTCACTAGTCTAAAGTAATTTATATGATTACACTACAAGTGAGTCATGTGTATTACCCAGtattattattgatattactATTAATGCTATTGTGTAATTATTTTCTAAGAATAGCTGTGGTACATTTTTCTTGACTGTTGAGGATGCGTAGAGGAAGACCGTTTGTTTGTCAGTTGTTCGTTTTCTGAAGTGCAATGCGCAGTATGGGGACTGAAAATGTCATAACATTACTTGAAGGTAAGTCCTGTAGATCTGACAGTAGTCACCCATCTTTATAGGGATGGATTTTATAGAAAAAAAACTCTAAGGTGTCTGTTTGTTAATTTCAAATTTTCTAAATTTGAAGCGTCTTATTTATTTTTCCAAGATTGTATTGCATTTATCTCCTTTCCTATATGTATTATTTAACGATTTTTTGTATCACACATTATTTATCATTTACATATATGCCTATTTATATGGACATCTAGAATTTATGCAACATAGTTCGACAGACTTTGACATCATAGCCCTTCAATAGGTACACAGGTTTTTGGTGAATGCTAGTTTTAAGACATGGTTTCAATGGCTGGTGGTTTTATGTTGTTGTAGTAGAAACCCCCTAAGTGTAAATCTTGGAGTATTGGGGCATTTTTCATGATTTATCTTGTGTCAATGCCTCTATGAAAAACAAAGTTATATGTAGCCTTTTGAAATACCGAATATTATAAAAATGTAACACACCAGCATGTCATTTGTCGTCATTGCCAATTTTCATATCACGTCATTGTTATTTCATCAGTTGGACTGTCCATGCATACATTTATGAAACGCTAATGAtatgaaaatgttatattttattgTGTTTAACATTTTGTAAATAAAGTGCTTAAATTTA
>XM_036974475.1
TTGGAATTGGTGGAAGCAAGTATAAACCTCTGGTTTTGTCTGAACATGGATATGTTTGCCTATTCGATGCAATGCGTTGGTCTTTGCGGTCGAGGTGGATGTAACGATGAGCACGTGAAGAAAAATACGACACATATCTGCATAAAATACGGTCAAGGAATACAGAGGCGGTGGGAAACTCCAATCACGTGATACAAGAACACCCATGCCATTGGATAGGGCCTTGGTTTGaatcttcacaatgcagaaagctACATACTACGATAATTCTGGACTTTTTGGAAGCTACTCTTACCCCAAATCCGACTCATATATGTATGGCCCATCTCACCAGCCCTACCCCACTTCTAACCTTGAGAGTGATTATCAGGGTCCAGTTTGTCCAATACAAACCACAACTGTACGGCCACCAACTCATAAAGACAATGACATGAATGGCTGCATGCGACCAAGTAGCAGCCAAGGAAACACCCAACAGTCGAGTATTGGTGAACAGCCGCAGGCACCTCCATTGTCGGCATCTTCCCCTAACTCCAGCAACACTTCATCTCAGAAGAAGAAATCTCCCCCAAACAATGCTTCAAATACTGCCACCCCAGTCATTAACAAGCAAATTTTCCCATGGATGAAGGAGACGCGATCGAACGCCAAACAGAAAAGCAACAGCAGCAACAATTGTACAACTGCAgaagGTGAGTCCTGCGATGAAAAAAGTCCACCTGGTCCAGCCTCCAAACGGGTCCGAACTGCCTACACCAGTGCACAACTTGTAGAACTTGAGAAGGAGTTCCATTTCAACCGGTACCTGTGTCGTCCCCGAAGAGTGGAGATGGCTAATTTATTGAATCTCACTGAGCGCCAAATAAAGATCTGGTTTCAAAACAGAAGGATGAAATACAAAAAGGATCAGAAGGCTAAGGGGATAATGCACTCTCCCATCGGACACTCCCCGGACAGAAGCCCACCATTAAGTGGCCCAAATCACATTGGATATTCTGTAAATGTAAACAGCCTCAGCTATGATGCGCCCTCGCCCCCGTCATTCGCCAAACCCCAGCAAAACATGTACGGCTTGGCTGCGTACACGGCACCATTAGGTGGTTGCATACCGCAACAAAAAAGGTATCCGGGGTCCGAATACGAACACCACAGCATGCAAGGCAATGGTGGCTTTGCCAACGCTAATTTGCAAGGCAGTCCGGTGTACGTTGGGGGAAATTTCGTTGATTCCATGCCAGCCTCGGGCCCCATGTTCAACCTCGGCCatctccctcatccctcatctGCCAGCGTGGACTACAGCTGTGCCGCTCAGATTCCAGGCAACCACCACCATGGACCCTGTGACCCCCATCCCACATACACAGACCTCACCTCTCACCATGCGTCTCAGGGAAGGATTCAGGAAGCGCCTAAACTAACGCATTTGTAATTTGTGAGGAATCCATCTGTGTGCCCAAATTATGTTACGCTCTTTTATTACCTCACTAGTCTAAAGTAATTTATATGATTACACTACAAGTGAGTCATGTGTATTACCCAGtattattattgatattactATTAATGCTATTGTGTAATTATTTTCTAAGAATAGCTGTGGTACATTTTTCTTGACTGTTGAGGATGCGTAGAGGAAGACCGTTTGTTTGTCAGTTGTTCGTTTTCTGAAGTGCAATGCGCAGTATGGGGACTGAAAATGTCATAACATTACTTGAAGGTAAGTCCTGTAGATCTGACAGTAGTCACCCATCTTTATAGGGATGGATTTTATAGAAAAAAAACTCTAAGGTGTCTGTTTGTTAATTTCAAATTTTCTAAATTTGAAGCGTCTTATTTATTTTTCCAAGATTGTATTGCATTTATCTCCTTTCCTATATGTATTATTTAACGATTTTTTGTATCACACATTATTTATCATTTACATATATGCCTATTTATATGGACATCTAGAATTTATGCAACATAGTTCGACAGACTTTGACATCATAGCCCTTCAATAGGTACACAGGTTTTTGGTGAATGCTAGTTTTAAGACATGGTTTCAATGGCTGGTGGTTTTATGTTGTTGTAGTAGAAACCCCCTAAGTGTAAATCTTGGAGTATTGGGGCATTTTTCATGATTTATCTTGTGTCAATGCCTCTATGAAAAACAAAGTTATATGTAGCCTTTTGAAATACCGAATATTATAAAAATGTAACACACCAGCATGTCATTTGTCGTCATTGCCAATTTTCATATCACGTCATTGTTATTTCATCAGTTGGACTGTCCATGCATACATTTATGAAACGCTAATGAtatgaaaatgttatattttattgTGTTTAACATTTTGTAAATAAAGTGCTTAAATTTA
>XM_021597219.2
ACGTCCCCTAGAAACACGGCGTCGTCATTAATCGCGAGGACTCTATCAGACTTGAAAACTGAAGAGATCCCAAGAAAATAATATCCAAACGCTCCGATACCCAACGCAACTGTAGCCAGCACTTTAGCACAGCATCTCAACCAATGGAAGCTTGGTAGGTCGAGGTGGATGTAACGATGAGCACGTGAAGAAAAATACGACACATATCTGCATAAAATACGGTCAAGGAATACAGAGGCGGTGGGAAACTCCAATCACGTGATACAAGAACACCCATGCCATTGGATAGGGCCTTGGTTTGaatcttcacaatgcagaaagctACATACTACGATAATTCTGGACTTTTTGGAAGCTACTCTTACCCCAAATCCGACTCATATATGTATGGCCCATCTCACCAGCCCTACCCCACTTCTAACCTTGAGAGTGATTATCAGGGTCCAGTTTGTCCAATACAAACCACAACTGTACGGCCACCAACTCATAAAGACAATGACATGAATGGCTGCATGCGACCAAGTAGCAGCCAAGGAAACACCCAACAGTCGAGTATTGGTGAACAGCCGCAGGCACCTCCATTGTCGGCATCTTCCCCTAACTCCAGCAACACTTCATCTCAGAAGAAGAAATCTCCCCCAAACAATGCTTCAAATACTGCCACCCCAGTCATTAACAAGCAAATTTTCCCATGGATGAAGGAGACGCGATCGAACGCCAAACAGAAAAGCAACAGCAGCAACAATTGTACAACTGCAgaagGTGAGTCCTGCGATGAAAAAAGTCCACCTGGTCCAGCCTCCAAACGGGTCCGAACTGCCTACACCAGTGCACAACTTGTAGAACTTGAGAAGGAGTTCCATTTCAACCGGTACCTGTGTCGTCCCCGAAGAGTGGAGATGGCTAATTTATTGAATCTCACTGAGCGCCAAATAAAGATCTGGTTTCAAAACAGAAGGATGAAATACAAAAAGGATCAGAAGGCTAAGGGGATAATGCACTCTCCCATCGGACACTCCCCGGACAGAAGCCCACCATTAAGTGGCCCAAATCACATTGGATATTCTGTAAATGTAAACAGCCTCAGCTATGATGCGCCCTCGCCCCCGTCATTCGCCAAACCCCAGCAAAACATGTACGGCTTGGCTGCGTACACGGCACCATTAGGTGGTTGCATACCGCAACAAAAAAGGTATCCGGGGTCCGAATACGAACACCACAGCATGCAAGGCAATGGTGGCTTTGCCAACGCTAATTTGCAAGGCAGTCCGGTGTACGTTGGGGGAAATTTCGTTGATTCCATGCCAGCCTCGGGCCCCATGTTCAACCTCGGCCatctccctcatccctcatctGCCAGCGTGGACTACAGCTGTGCCGCTCAGATTCCAGGCAACCACCACCATGGACCCTGTGACCCCCATCCCACATACACAGACCTCACCTCTCACCATGCGTCTCAGGGAAGGATTCAGGAAGCGCCTAAACTAACGCATTTGTAATTTGTGAGGAATCCATCTGTGTGCCCAAATTATGTTACGCTCTTTTATTACCTCACTAGTCTAAAGTAATTTATATGATTACACTACAAGTGAGTCATGTGTATTACCCAGtattattattgatattactATTAATGCTATTGTGTAATTATTTTCTAAGAATAGCTGTGGTACATTTTTCTTGACTGTTGAGGATGCGTAGAGGAAGACCGTTTGTTTGTCAGTTGTTCGTTTTCTGAAGTGCAATGCGCAGTATGGGGACTGAAAATGTCATAACATTACTTGAAGGTAAGTCCTGTAGATCTGACAGTAGTCACCCATCTTTATAGGGATGGATTTTATAGAAAAAAAACTCTAAGGTGTCTGTTTGTTAATTTCAAATTTTCTAAATTTGAAGCGTCTTATTTATTTTTCCAAGATTGTATTGCATTTATCTCCTTTCCTATATGTATTATTTAACGATTTTTTGTATCACACATTATTTATCATTTACATATATGCCTATTTATATGGACATCTAGAATTTATGCAACATAGTTCGACAGACTTTGACATCATAGCCCTTCAATAGGTACACAGGTTTTTGGTGAATGCTAGTTTTAAGACATGGTTTCAATGGCTGGTGGTTTTATGTTGTTGTAGTAGAAACCCCCTAAGTGTAAATCTTGGAGTATTGGGGCATTTTTCATGATTTATCTTGTGTCAATGCCTCTATGAAAAACAAAGTTATATGTAGCCTTTTGAAATACCGAATATTATAAAAATGTAACACACCAGCATGTCATTTGTCGTCATTGCCAATTTTCATATCACGTCATTGTTATTTCATCAGTTGGACTGTCCATGCATACATTTATGAAACGCTAATGAtatgaaaatgttatattttattgTGTTTAACATTTTGTAAATAAAGTGCTTAAATTTA
>XM_021597216.2
GTCCCCTAGAAACACGGCGTCGTCATTAATCGCGAGGACTCTATCAGACTTGAAAACTGAAGAGATCCCAAGAAAATAATATCCAAACGCTCCGATACCCAACGCAACTGTAGCCAGCACTTTAGCACAGCATCTCAACCAATGGAAGCTTGGTCGAGGTGGATGTAACGATGAGCACGTGAAGAAAAATACGACACATATCTGCATAAAATACGGTCAAGGAATACAGAGGCGGTGGGAAACTCCAATCACGTGATACAAGAACACCCATGCCATTGGATAGGGCCTTGGTTTGaatcttcacaatgcagaaagctACATACTACGATAATTCTGGACTTTTTGGAAGCTACTCTTACCCCAAATCCGACTCATATATGTATGGCCCATCTCACCAGCCCTACCCCACTTCTAACCTTGAGAGTGATTATCAGGGTCCAGTTTGTCCAATACAAACCACAACTGTACGGCCACCAACTCATAAAGACAATGACATGAATGGCTGCATGCGACCAAGTAGCAGCCAAGGAAACACCCAACAGTCGAGTATTGGTGAACAGCCGCAGGCACCTCCATTGTCGGCATCTTCCCCTAACTCCAGCAACACTTCATCTCAGAAGAAGAAATCTCCCCCAAACAATGCTTCAAATACTGCCACCCCAGTCATTAACAAGCAAATTTTCCCATGGATGAAGGAGACGCGATCGAACGCCAAACAGAAAAGCAACAGCAGCAACAATTGTACAACTGCAgaagGTGAGTCCTGCGATGAAAAAAGTCCACCTGGTCCAGCCTCCAAACGGGTCCGAACTGCCTACACCAGTGCACAACTTGTAGAACTTGAGAAGGAGTTCCATTTCAACCGGTACCTGTGTCGTCCCCGAAGAGTGGAGATGGCTAATTTATTGAATCTCACTGAGCGCCAAATAAAGATCTGGTTTCAAAACAGAAGGATGAAATACAAAAAGGATCAGAAGGCTAAGGGGATAATGCACTCTCCCATCGGACACTCCCCGGACAGAAGCCCACCATTAAGTGGCCCAAATCACATTGGATATTCTGTAAATGTAAACAGCCTCAGCTATGATGCGCCCTCGCCCCCGTCATTCGCCAAACCCCAGCAAAACATGTACGGCTTGGCTGCGTACACGGCACCATTAGGTGGTTGCATACCGCAACAAAAAAGGTATCCGGGGTCCGAATACGAACACCACAGCATGCAAGGCAATGGTGGCTTTGCCAACGCTAATTTGCAAGGCAGTCCGGTGTACGTTGGGGGAAATTTCGTTGATTCCATGCCAGCCTCGGGCCCCATGTTCAACCTCGGCCatctccctcatccctcatctGCCAGCGTGGACTACAGCTGTGCCGCTCAGATTCCAGGCAACCACCACCATGGACCCTGTGACCCCCATCCCACATACACAGACCTCACCTCTCACCATGCGTCTCAGGGAAGGATTCAGGAAGCGCCTAAACTAACGCATTTGTAATTTGTGAGGAATCCATCTGTGTGCCCAAATTATGTTACGCTCTTTTATTACCTCACTAGTCTAAAGTAATTTATATGATTACACTACAAGTGAGTCATGTGTATTACCCAGtattattattgatattactATTAATGCTATTGTGTAATTATTTTCTAAGAATAGCTGTGGTACATTTTTCTTGACTGTTGAGGATGCGTAGAGGAAGACCGTTTGTTTGTCAGTTGTTCGTTTTCTGAAGTGCAATGCGCAGTATGGGGACTGAAAATGTCATAACATTACTTGAAGGTAAGTCCTGTAGATCTGACAGTAGTCACCCATCTTTATAGGGATGGATTTTATAGAAAAAAAACTCTAAGGTGTCTGTTTGTTAATTTCAAATTTTCTAAATTTGAAGCGTCTTATTTATTTTTCCAAGATTGTATTGCATTTATCTCCTTTCCTATATGTATTATTTAACGATTTTTTGTATCACACATTATTTATCATTTACATATATGCCTATTTATATGGACATCTAGAATTTATGCAACATAGTTCGACAGACTTTGACATCATAGCCCTTCAATAGGTACACAGGTTTTTGGTGAATGCTAGTTTTAAGACATGGTTTCAATGGCTGGTGGTTTTATGTTGTTGTAGTAGAAACCCCCTAAGTGTAAATCTTGGAGTATTGGGGCATTTTTCATGATTTATCTTGTGTCAATGCCTCTATGAAAAACAAAGTTATATGTAGCCTTTTGAAATACCGAATATTATAAAAATGTAACACACCAGCATGTCATTTGTCGTCATTGCCAATTTTCATATCACGTCATTGTTATTTCATCAGTTGGACTGTCCATGCATACATTTATGAAACGCTAATGAtatgaaaatgttatattttattgTGTTTAACATTTTGTAAATAAAGTGCTTAAATTTA
>XM_021597217.2
GTGAACAAATATGCTTGTATTTTAAGGTCGTGCCTTTATTTGTCATCATAAAGGTTTCCTGAAACACCAAAAATCTTAATGATAGCTTCATTTCGGTGACTGTGTCTGAAAACCTGTATTTTTCAATGGGAGATGATTGCCAGATTTTTTTGGGGTGGAATAAGGATGCCTTGGTTTTTTATTGGTAGTTGAGCGTGAGTCTTTCCATTCTATCGGGAATACTGTCTGCATTGGTATATGGAAATGTCTGAAAAACCGCAAGATCAGGTTTAGGACAGTATTGTCTACAGACAAAGGGTGAAGGATATATTCTAGAGACTGCAAGGAAAGGAATTGAGACTAAGAAACACAAGTATATGATAAATTGATTTACAGGTCGAGGTGGATGTAACGATGAGCACGTGAAGAAAAATACGACACATATCTGCATAAAATACGGTCAAGGAATACAGAGGCGGTGGGAAACTCCAATCACGTGATACAAGAACACCCATGCCATTGGATAGGGCCTTGGTTTGaatcttcacaatgcagaaagctACATACTACGATAATTCTGGACTTTTTGGAAGCTACTCTTACCCCAAATCCGACTCATATATGTATGGCCCATCTCACCAGCCCTACCCCACTTCTAACCTTGAGAGTGATTATCAGGGTCCAGTTTGTCCAATACAAACCACAACTGTACGGCCACCAACTCATAAAGACAATGACATGAATGGCTGCATGCGACCAAGTAGCAGCCAAGGAAACACCCAACAGTCGAGTATTGGTGAACAGCCGCAGGCACCTCCATTGTCGGCATCTTCCCCTAACTCCAGCAACACTTCATCTCAGAAGAAGAAATCTCCCCCAAACAATGCTTCAAATACTGCCACCCCAGTCATTAACAAGCAAATTTTCCCATGGATGAAGGAGACGCGATCGAACGCCAAACAGAAAAGCAACAGCAGCAACAATTGTACAACTGCAgaagGTGAGTCCTGCGATGAAAAAAGTCCACCTGGTCCAGCCTCCAAACGGGTCCGAACTGCCTACACCAGTGCACAACTTGTAGAACTTGAGAAGGAGTTCCATTTCAACCGGTACCTGTGTCGTCCCCGAAGAGTGGAGATGGCTAATTTATTGAATCTCACTGAGCGCCAAATAAAGATCTGGTTTCAAAACAGAAGGATGAAATACAAAAAGGATCAGAAGGCTAAGGGGATAATGCACTCTCCCATCGGACACTCCCCGGACAGAAGCCCACCATTAAGTGGCCCAAATCACATTGGATATTCTGTAAATGTAAACAGCCTCAGCTATGATGCGCCCTCGCCCCCGTCATTCGCCAAACCCCAGCAAAACATGTACGGCTTGGCTGCGTACACGGCACCATTAGGTGGTTGCATACCGCAACAAAAAAGGTATCCGGGGTCCGAATACGAACACCACAGCATGCAAGGCAATGGTGGCTTTGCCAACGCTAATTTGCAAGGCAGTCCGGTGTACGTTGGGGGAAATTTCGTTGATTCCATGCCAGCCTCGGGCCCCATGTTCAACCTCGGCCatctccctcatccctcatctGCCAGCGTGGACTACAGCTGTGCCGCTCAGATTCCAGGCAACCACCACCATGGACCCTGTGACCCCCATCCCACATACACAGACCTCACCTCTCACCATGCGTCTCAGGGAAGGATTCAGGAAGCGCCTAAACTAACGCATTTGTAATTTGTGAGGAATCCATCTGTGTGCCCAAATTATGTTACGCTCTTTTATTACCTCACTAGTCTAAAGTAATTTATATGATTACACTACAAGTGAGTCATGTGTATTACCCAGtattattattgatattactATTAATGCTATTGTGTAATTATTTTCTAAGAATAGCTGTGGTACATTTTTCTTGACTGTTGAGGATGCGTAGAGGAAGACCGTTTGTTTGTCAGTTGTTCGTTTTCTGAAGTGCAATGCGCAGTATGGGGACTGAAAATGTCATAACATTACTTGAAGGTAAGTCCTGTAGATCTGACAGTAGTCACCCATCTTTATAGGGATGGATTTTATAGAAAAAAAACTCTAAGGTGTCTGTTTGTTAATTTCAAATTTTCTAAATTTGAAGCGTCTTATTTATTTTTCCAAGATTGTATTGCATTTATCTCCTTTCCTATATGTATTATTTAACGATTTTTTGTATCACACATTATTTATCATTTACATATATGCCTATTTATATGGACATCTAGAATTTATGCAACATAGTTCGACAGACTTTGACATCATAGCCCTTCAATAGGTACACAGGTTTTTGGTGAATGCTAGTTTTAAGACATGGTTTCAATGGCTGGTGGTTTTATGTTGTTGTAGTAGAAACCCCCTAAGTGTAAATCTTGGAGTATTGGGGCATTTTTCATGATTTATCTTGTGTCAATGCCTCTATGAAAAACAAAGTTATATGTAGCCTTTTGAAATACCGAATATTATAAAAATGTAACACACCAGCATGTCATTTGTCGTCATTGCCAATTTTCATATCACGTCATTGTTATTTCATCAGTTGGACTGTCCATGCATACATTTATGAAACGCTAATGAtatgaaaatgttatattttattgTGTTTAACATTTTGTAAATAAAGTGCTTAAATTTA
>TU305367
ACCGTCCCCAACCAAAACGCTCAGCCTACACTCGCTCAAAATTTGCCTTATTATTGCCTGAATTAAAGTGTGAACCTACCAGATCCTCGATAACTATATAGTTATTTACTTGACTTGTCAGGGCTAGCGTTTCTTCCTGTGTGCATACCGAACATCGAAAGGAGAGCCTCTGCTGTTCATCATCCGTATAGTTTCACTGTAACATCATGTATTATTTATACAGAGTCACCACAAGAAAACACATGGATTACCCAACTGCATTAGGTCGAGGTGGATGTAACGATGAGCACGTGAAGAAAAATACGACACATATCTGCATAAAATACGGTCAAGGAATACAGAGGCGGTGGGAAACTCCAATCACGTGATACAAGAACACCCATGCCATTGGATAGGGCCTTGGTTTGaatcttcacaatgcagaaagctACATACTACGATAATTCTGGACTTTTTGGAAGCTACTCTTACCCCAAATCCGACTCATATATGTATGGCCCATCTCACCAGCCCTACCCCACTTCTAACCTTGAGAGTGATTATCAGGGTCCAGTTTGTCCAATACAAACCACAACTGTACGGCCACCAACTCATAAAGACAATGACATGAATGGCTGCATGCGACCAAGTAGCAGCCAAGGAAACACCCAACAGTCGAGTATTGGTGAACAGCCGCAGGCACCTCCATTGTCGGCATCTTCCCCTAACTCCAGCAACACTTCATCTCAGAAGAAGAAATCTCCCCCAAACAATGCTTCAAATACTGCCACCCCAGTCATTAACAAGCAAATTTTCCCATGGATGAAGGAGACGCGATCGAACGCCAAACAGAAAAGCAACAGCAGCAACAATTGTACAACTGCAgaagGTGAGTCCTGCGATGAAAAAAGTCCACCTGGTCCAGCCTCCAAACGGGTCCGAACTGCCTACACCAGTGCACAACTTGTAGAACTTGAGAAGGAGTTCCATTTCAACCGGTACCTGTGTCGTCCCCGAAGAGTGGAGATGGCTAATTTATTGAATCTCACTGAGCGCCAAATAAAGATCTGGTTTCAAAACAGAAGGATGAAATACAAAAAGGATCAGAAGGCTAAGGGGATAATGCACTCTCCCATCGGACACTCCCCGGACAGAAGCCCACCATTAAGTGGCCCAAATCACATTGGATATTCTGTAAATGTAAACAGCCTCAGCTATGATGCGCCCTCGCCCCCGTCATTCGCCAAACCCCAGCA

Function

symbol description
hoxd3 Enables DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Involved in several processes, including Notch signaling pathway; cell-matrix adhesion; and positive regulation of macromolecule metabolic process. Located in aggresome and nuclear body.

NR:

description
homeobox protein Hox-D3a-like

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0007275 multicellular organism development biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021597218.2 False 2559 mRNA 0.42 4 50162278 50184327
XM_036974475.1 False 2360 mRNA 0.42 4 50166916 50184327
XM_021597219.2 False 2430 mRNA 0.42 4 50175115 50184327
XM_021597216.2 False 2424 mRNA 0.42 4 50175117 50184327
XM_021597217.2 False 2647 mRNA 0.41 4 50177010 50184327
TU305367 True 1235 TUCP 0.46 4 50162301 50183026

Neighbor

gene id symbol gene type direction distance location
hoxd9a hoxd9aa coding upstream 3430 50155835 ~ 50158848 (+)
hoxd10a hoxd10 coding upstream 9051 50146811 ~ 50153227 (+)
hoxd11a hoxd11aa coding upstream 15786 50144655 ~ 50146492 (+)
hoxd12a hoxd12 coding upstream 21274 50139213 ~ 50141004 (+)
hoxd13a hoxd13aa coding upstream 25681 50134695 ~ 50136597 (+)
LOC110505268 hoxd1aa coding downstream 2838 50187165 ~ 50188694 (+)
LOC110520134 ro32 coding downstream 131743 50316070 ~ 50321294 (+)
LOC110520136 NA coding downstream 149973 50334300 ~ 50336340 (+)
agps LOC106586249 coding downstream 153840 50338167 ~ 50377090 (+)
osbpl6 LOC106586252 coding downstream 270712 50455039 ~ 50519865 (+)
G268714 NA non-coding upstream 59222 50102779 ~ 50103056 (+)
G268604 NA non-coding upstream 77121 50084110 ~ 50085157 (+)
G268620 NA non-coding upstream 118735 50043333 ~ 50043543 (+)
G268618 NA non-coding upstream 126255 50035823 ~ 50036023 (+)
G268877 NA non-coding downstream 48144 50232471 ~ 50232690 (+)
G268956 NA non-coding downstream 108358 50292685 ~ 50292893 (+)
G268970 NA non-coding downstream 128185 50312512 ~ 50312731 (+)
G268938 NA non-coding downstream 137160 50321487 ~ 50322542 (+)
G268939 NA non-coding downstream 138442 50322769 ~ 50323146 (+)
G267529 NA other upstream 306776 49836617 ~ 49855502 (+)
G267381 NA other upstream 606440 49554498 ~ 49555838 (+)
G267358 NA other upstream 649803 49510803 ~ 49512475 (+)
LOC110520046 LOC106586167 other upstream 3330034 46801058 ~ 46832288 (+)
G263859 LOC107588258 other upstream 3977474 46184134 ~ 46184804 (+)
LOC110520146 ino80d other downstream 417975 50601983 ~ 50618761 (+)
G269291 rap2a other downstream 714262 50898589 ~ 50900277 (+)
LOC110520169 il1rl1 other downstream 1389653 51573980 ~ 51582567 (+)
acvr2aa LOC106586327 other downstream 2982625 53124656 ~ 53172428 (+)
LOC110520187 LOC106586325 other downstream 3037100 53174264 ~ 53235027 (+)

Expression


Co-expression Network