nfe2l2a (LOC106586247)


Basic Information

Item Value
gene id nfe2l2a
gene name LOC106586247
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 50325109 ~ 50332906 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021597223.2
TATCAGACTGCTTGGGGTTTTCCGTAAACTTTCACAAGATTAGAAGCACTATTTCCTTCATAGTCAAAACATTGCTGGGCCGGACTCCTCGCCTTCGGATAGTCCACCATTTTATATTTCTGTAAAGGATTAcaaatttatatttttatatagGCCTATTGGGTTTTTCTTTACAAAGGGACAAGCCAACTATCCACTATGATGGAAACTGAGATGCATAAAATGAATCCTAGTCAACAGGACGTGGACCTAATCGACATCCTGTGGAGGCAGGACATTGACCTGGGCGCAGGGCGAGAGGTGTTTGACTACTGCCACCGTCAGAAGGAGCATGAGTTGCAGCGGCAGCGggtgcaggaggaggagaagaggcagCAGCTGctgagagagcaggagaaggcCTTGCTGGCTCAGCTACAGCTGGATGAGGAGACGGGGGAGTTCGTGCCCCGCCTTGCACCCAGCGGCCAGTCACCGCAGTCTGCCACCACCGCCGCACCCCCTCAAGTcacacagAATGTCAGCTTCACAGAAGACGGAGATGCCATGTCATTTGATGAATGTATGCAGCTGCTGGCAGAGACCTTCCCACTGGTAGAGGCTACGGCAACCGCTTCCGTCTGTCTGGATGTCACCGTAGCTCCAGCCCCAAACAGCAACCATGTCATGGCATGTGAGCTGCCAGCTTTGACCCAGCCACCCCTCCTCCCAGCCCCCCAGCCCCCACAGAGGACCTCCCCAGATTTGGAGCAGGCCTGGATGGAGCTTTTGTCCCTTCCTGAGCTGCAGCAATGCCTGAATATGCAAATGAAGGACACACTGGATCAGACAGGAGGATATCTGCCCACTAACACCACCCCTGAGGTGCAGGATCCAAACTACAGCTTCTACCCATTGCCCAACCTGGCAGAGGTGGCATCAAATGCAGCAGAGGTCTGCCCACCTGAATTCATCAACGCCTTTGAGGAGAGCTTTCCCAACATGGCTCCTCTTGACCACCTCAATCAGATGACCCTAAAGGCTCCAGACCTAAATACTAACTTCAGTGCAGCAACTTTCTGTGATGTATTTTATCAAGACATTGTTAACACAAAAGTGACAAGTGTCACCCTGCCTTGTGGCCAAGGAAATGGAGGTAACTCCTTGGCAGAGATATCACACAAGCCTACTTTTACACCAATGGAATTACATGACCTTTCTCCTAGAGAAGCATTTGACAGAGGAAACAAAACTGAGATAATGCCAGAATTTCCAGATTCGGACTCAGGTGTGTCTGTGGAGGCAAGTCCACATGCTAGCTCCCCTGAGAAATCGATGTATGGGGATGGATCCTTTGGTGGCTACAGCGATTCAGACATGGAGGAGATGGACAGTAACCCTGAGAGTGCAGAGTCTGACTACTCCGAGATGTTCTCACTGTCTTTCCAACCGGATGGTTTCCAGACTTCTCCCCCTGTGTCAGCTCAGCAGCAGGACAAAAAGCCCAAACATGGCAAGACCGAGCCAGATGAGGAGACAGGCCACAACGATCCCCCCTTCACCAAAGACAAGAAGAGGAGACGCTCCGAGAAGCGCCTCTCCAGAGACGAGCAGCGTGCCAAGGCCCTCCAGATCCCCTTCACTGTGGACATGATCATCAACCTGCCTGTGGACGACTTCAACGAGATGATGTCCAAGCACCAGCTCAACGAGGCCCAGCTGGCCCTGGTCAGAGACATCCGCCGGCGGGGCAAGAATAAGGTGGCTGCCCAGAACTGCCGCAAACGCAAGATGGAGAACATCGTGGAGCTGGAGTATGACCTGGACTCACTGAAGGAGGAAAAGGAGcgactgcagagagagaagacCAAGAATTACAGCAGCGTGCGACAGATGAAGCAGGAGCTTAACACCCTGTACCTGGAGGTGTTCAGTCTagtgagggatgaggaggggaagCCCTACTCCCCGTCAGAGTACTCCCTCCAGCAGACCACCGATGGCACAGTCTTCCTCGTCCCCCGCattaaaaaaatgcttttcaagaAAAATGACAACTAGCACTTCTCTGCTTTACTACTTGGTACTGCATTAGTAATAATACTATGCAAAGAACAACGTTGTAGATGCTTGGCTTTAAGCGTTAGTAAAATAGCAGAACTATTATATAGTCCTTGCCTACTCTCCTTGAATGCCTTTATAATATTTTTGACATTTGAGTTTTTTTGTACTGGTCTCCACTTTCATCTAAGGTTGTTTTACTGATATTGCTTGTAAATACATTTATACATGATTTGCTATTGAGATATGAAAATGTGAATGGTATATATCATGTTTTAGTATGCAAATGATATTGTTGCAATCACTGTTACTTAAAAGTCTGTTTTATAAACTTTACTCTTTGATTTGCAGCtctgtttattttgtattttctgaCCCTTTTCTGCTTAAGGCCAAAGGGGGTGTGATATATTGCATGaggcaacgcggagtgcctggacacagccgtggtatattggccatatatcacaaacccccaaggtgccttattgctattataaactggttaccaatgtaattagagcagtaaaaacaaaatgttttgtcatacctgtggtttACCGTCTGATATAATTttcagcggcaggtagcctagtggttagagcgatgggccagtaaccggaaggttgcaagattgaatccccgagctgacaaggtaaaactctgccgttctgcccctaaactgttcctaggccgtcattgtaaataagaatttcttcttaattgacttgcccagttaaataaaaggttaaatcaaataaaaatataccTCGGCTGTCAGCCAATTCAGGGCTCGAATGACCCAGTTtataaaatgaaataaacaatgaCATTTCGTCAGTTACTCTTAAGTTTTATATCAGCCTAAACACAATCTATATTGATTTATAAAGCACTACATGGCCTTGCACCCGAATACATGTCTGATATGCTTTTAATGTTTGATATCTTCTGCCACTGGTCTTTTAGTCATTCCAAATGTCAGAACCAAAACTTTTGGTGAGGCTGCCTTCAGACACTACGGTCCTGGTCTTTGGAATAGCCTGCCGGATCTTAGGTCCTCAAACTGTTGATTCTTAAGATTTGTCTTAAGACATACCATTTTATCCGTGCTATTAACTAAAGTGCTTTTATTTGTCTTACCAATATTAGGAACTTTTATCCGCTTTTTCTGCATTCAATTTCCTATCCACTGCTATTTTACTCTTAATGTCTATCTTGATTTTATATTTGCATAGAAATGTTTGATCTTTCCACCTTTAATTTTATTTAAGCACTTTGAAAAGCATTTGTAAGAATTTTGCTATataaataaagttggatttgataGTATGCAACAA

Function

NR:

description
nuclear factor erythroid 2-related factor 2

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K05638 NFE2L2, NRF2; nuclear factor erythroid 2-related factor 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021597223.2 True 3380 mRNA 0.46 5 50325109 50332906

Neighbor

gene id symbol gene type direction distance location
evx2 evx2a coding downstream 200489 50119669 ~ 50124620 (-)
lnpa LOC100194569 coding downstream 225412 50084100 ~ 50099697 (-)
LOC110520125 atp5g3 coding downstream 343239 49979196 ~ 49981870 (-)
atf2 atf2 coding downstream 346217 49962467 ~ 49978892 (-)
LOC110520122 LOC106586243 coding downstream 404781 49905433 ~ 49920328 (-)
pde11a pde11a coding upstream 45494 50378400 ~ 50436074 (-)
LOC110520139 LOC106586251 coding upstream 107295 50440201 ~ 50442930 (-)
prkra LOC106586253 coding upstream 187359 50520265 ~ 50525331 (-)
LOC110520142 LOC106586254 coding upstream 201173 50534079 ~ 50542288 (-)
LOC110505276 NA coding upstream 210080 50542986 ~ 50543432 (-)
G269603 NA non-coding downstream 1983 50322767 ~ 50323126 (-)
G269604 NA non-coding downstream 2557 50321491 ~ 50322552 (-)
G269632 NA non-coding downstream 4910 50318737 ~ 50320199 (-)
G269633 ro32 non-coding downstream 6505 50318073 ~ 50318604 (-)
G269629 NA non-coding downstream 11892 50312997 ~ 50313217 (-)
G269634 NA non-coding upstream 312 50333218 ~ 50333431 (-)
G269649 LOC106586249 non-coding upstream 32970 50365876 ~ 50372026 (-)
G269663 NA non-coding upstream 55992 50388898 ~ 50389175 (-)
G269664 NA non-coding upstream 56290 50389196 ~ 50389424 (-)
LOC110520121 LOC106581751 other downstream 423571 49895327 ~ 49901575 (-)
LOC110520119 NA other downstream 453464 49867187 ~ 49871681 (-)
LOC110520112 LOC106586230 other downstream 757635 49563841 ~ 49608114 (-)
LOC118944672 NA other downstream 822138 49494001 ~ 49503025 (-)
G268310 NA other downstream 829306 49495477 ~ 49495803 (-)
LOC110520160 LOC106586095 other upstream 795534 51126600 ~ 51130404 (-)
fgf9 NA other upstream 1140418 51471899 ~ 51478510 (-)
il1rl1 il1rl1 other upstream 1264493 51596933 ~ 51619476 (-)
LOC110520182 NA other upstream 2375277 52693956 ~ 52708816 (-)

Expression


Co-expression Network