pde11a (pde11a)


Basic Information

Item Value
gene id pde11a
gene name pde11a
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 50378400 ~ 50436074 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021597227.2
acgaggtcaaatcatgacgttagcgatcttcaggtcggaaTGTCCgcgctctagaaagatgcccgagTTTCCGAATTGAATGAATGTTCGAAACAATTTTTCTCAATCGGAGCTCGTTGACAGTTATCTTGAATCCACGGAAAtcagagatttccgagttcccagttgttttgaacacggcaaTAGCCAACGTCATTTGCGCACTCTCCACTCCTGTGATGCACCGCCAGTGCGCGGCAGCAGTTGCTCTCTGAATAAAGAACAGTCGAAGTCCGTGAGTCTTTTTGCATCCTGTCTTTCATCCATGAGAGGTGGCTTTTATTAATTGCAATTGAGAGTTAATATGTTATTGGAGGTGAGGTGGTATATTCCTCATAATTTCTCCATCATATTTTGTACAGAAAGCAACAAGATATGTAGCCTAGACCTCAAAGATAGTTTCGTTATGAATGGATTAAGGGAAGTCGCGTTACAGAAGTGTCtaggtttatttattttttgatacTCTGTAAAATATTataaatgaacatttattgtgcAATTTTATGGATTTGGTTCAGCCAGGACCATCAACACAACCGACATGGCAGTGTCCAATATGGTATTCTCTGACGTGGAAAGTTTTCTGGATACGCATCCTGAGTTGTTTGAGGACTACCTAAACAGAAAAGGGAAACATAGTATGGTGGAGAAATGGCTCAAGAATCACCAGGCAAGCAAAACTTCAGCAAGTACAACCGCAGTCGCCGAGTCGGAGAAAACAAGCGTCAGCGCCTGTAAAGACAGTTGGGCGAGCTGCAAAGGTGATGGGGGCCCGCATAGACGAGCATCGCAGAAGGAACTGCGGAAAACTTTCGCCAGGTCCAAAGCAATGAATTGCAACAGGACATATGATGAGCAAGTCAACTACAGGGCTCAGGAGCCACTGACAAGTATGAGGAGGAGAGCTCTGCTGAGAAAAGCCAGCTCGTTGCCTCCAACCACTGCCCACATCCTGAGCGCGCTCCTGGAGTCGCGAGTGAACATACCTCAGTATCCATCCACAGCTGTCGATTTCAAATATTACCTTAAAGAACACAACGAACGAGAGTTTTTCCTGGAATTGGTAAAAGACATATCTAACGACTTGGATTTAACTAGCCTCAGCTACAAAATcctggtgtttgtgtgtataatGGTCGATGCAGACCGCTGTTCCTTATTCTTAGTGGAAGGCTCAGCAAATAAGAAGACATTGGTATCCAAATTCTTTGATGTTCATGCAGGTATCACAGTTTTACCCTCCATGAGCAACTCGGATGAAGTTCAGGTTCCTTGGGGAAAGGGAATCATTGGATATGTTGCTGAGCATGGAGAGACAGTCAATATCCCAGATGcctatcagGACCGTCGTTTCAGTGATGAGATTGACAAGCTGTCAGGATACAAGACCAAGTCCCTCCTCTGTATGCCCATTCACAACAGTGATGGGGAGATCATTGGAGTAGCCCAGGCCATCAACAAGAGTCCAGGAGGGGCTCTCTTCACTGAAGACGATGAGAAGGTGCTGCAGATGTACCTGCCCTTTTGTGGGATCGCCATCTCCAACGCACAGCTCTTCGCTGCCTCCAGAAAAGAGTATGACAGGAGTCGGTCGCTCCTGGAGGTGGTCAACGACCTGTTTGAGGAGCAGACAGACCTGGAGAAGATTGTGAGGAAGATCATGTACCGCGCCCAGACTCTGCTCAAGTGTGAGCGCTGCTCTGTCCAACTGCTGGAGGACATTGAGTCACCGGTGGTGAAATTCACCAAGTCGTTCGAACTGCTGTCCCCCAAATGCAGTGCAGACATAGAAAGCAGTTTTAAAGACAGCATGGAGAAGTCCTCCTACTCTGATTGGCTCATCAACAACAGTATAGCAGAGTTGGTAGCGTCCACTGGTCTGCCCGTCAACATCAGTGATGCCTACCAGGATCCCCGGTTTGACGCAGAGGCAGATCAGTTCTCCGGCTTCCACATTCGTTCAGTGCTTTGTGTACCTATTTGGAACAGCAACCATCAAATCATTGGTGTGGCTCAGGTGCTCAACAGGCTGGATGGTAACCAGTTTGACGATGCAGACCAGAGACTGTTCGAGGCCTTTGTGATCTTCTGTGGCCTTGGCATCAACAACACCATCATGTACGACCAGGTGAAGAAGTCCTGGGCCAAACAGTCCGTGGCTCTCGACGTTCTGTCATACCATGCAACCTGTTCCAAGACTGAGGTCGACAAATTCAAGGCTGCTAACATCCCCCTTGTTTGCGAGCTTGGCATCGATAAGCTTTCCTTTGATGATTTCTCTCTGGATGTGGACGCCATGATAACCGCAGCCCTCAGGATGTTTATGGAGCTGGGCATGGTGCAGAAGTTCAAGATCGACTACGAGACTCTGTGCAGATGGCTGCTGACGGTCAGGAAGAACTACCGCATGGTGCTGTACCACAACTGGAGGCATGCCTTCAACGTCTGCCAGTGCATGTTCGCCATACTAACGACGGCAGGCTTCCAAGAGACCCTGACGGAGATTGAGATCCTGGCTCTTATAGTGGGCTGTGTCTGTCACGACCTGGACCACAGAGGAACCAACAACGCCTTCCAGGCCAAGACAGGTTCAGCCTTGTCTCTGCTGTATGGAACCTCAGCTACTCTCGAGCATCACCACTTCAACCACGCCGTAATGATCCTGCAGAGTGAGGGACACAACATCTTCTCCAACCTGTCGTCCAGAGAATACGGGGACCTCATGCAGCTTTTGAAACAGTCCATCCTAGCCACCGACCTCACTCTATACTTTGAGAACAGGAACACGTTTTTTGAGCTGGTCAACAAAGGCGAATACAATTGGAACGTGAAAGGCCACAGAGAcatgtgtagGTCCATGTTGATGACAGCATGTGACTTGGGGGCCGTCACCAAACCCTGGGAAATATCACGCAAGGTGGCAGAACTGGTCACCAGTGAGTTTTTTGagcagggggacagagagagatctgAACTGAAGCTCACCCCATCTGCCATTTTTGATCGAAACCGGAAGGACGAGTTGCCGGGGCTGCAGCTGGAGTGGATCGATGGGATCTGTACTCCGCTTTATGAGacaTTGGTGAAAATAAACCCCAAGCTCCAGCCAATGGTTGACTTGATCCAGGCTAACAGGGCCAAGTGGGGGGAGCTAAACAAAGAGAGACAACGCAGCCAGAGTGAGTCCAAACCCACAAGCCATTGCAGCAGTGACACCACAGAAACAAGAACTTGTTCTTTGGGCGACACACCTTGCAACACACCTTGCTGTGCAGGTGACCCTCCCAAACCGGCAAGCTAGCTCCTGCTGACCTCTCCAGGCAATATTTCCTCCGCCTCTTAGCTTCTTTACTCTTTAATGCAGCCTGCAGAATaggcagtgcagtgcagtgcagtgcagagATTTCTTGCGCTCTGCTTGCTTTTGCCACTAGAGATGGGCTTTAGACTGTCGCCACGGTCAAGGTGTTTCCTGCTCCTTCCACAGCTACTTCCTGTGTGGGAAACAGAGAGAGCTGTGTCTGACATGTTAGTCAGAGCAGCGCAGCTAGTTATTCCTCTGACCATTGCAAGTGTGAGGAAACTTCAGACCTCTGTGTCAGAATGGCAAACAGTGATAAGGCAGGTGTAGGAGAAAGCTGCAACCTCACTACAAGGTGCATGGAGTGTATGTAGAGATGACCTAACTGTTGTTTTTCTGTACCGTCATTATGCCATCCCTTACGTTGCTTTCGATATCTGTTGCTAGAATATTGTTCTTGGGGAGGGTGGTtactcttttttattttattttgtacataTGACATTTGAAGAGATGGTACTTGCAAGTGCAGTTGTTAATTTGGATGCTTGGCTGATTTGGAGTCATGAAGTTAGCTAGTGTTGAGGGTCAAGGTGTTGGGAACCAGCAGGGCCTGTGGCTACGCTTGCAATGCAAATCGTTCGCTCCACTCCACTCCTTGTGCCTTGTTTGAAAGTCCTTATGAAAAATGCATGGCGTCGTCACACACTGAGATTCTTCTATAGTTTGAGAGATTCTATTTGACCATTCTGAGTTTGGTCTTGATCCCCTGTCTCAGTTAGAGAGTATTTAATACATGTAAGTTACGTTAGAAGTATTACTGACCCAGAAGAGTCGTTTTATAAGGCACGTGATTGGGAAAGAGATCAATCACACACATAGACAATGTGCCTTTGCAAAATTGTTCTGATCATGTCACGTTTTATGAATAATTTGCCCATTTACAATTAGGCTCCCATCCCATTGGTTTACTAATCTCAACGACGTGCTTGTTTTTAGTCTATGGCCTTTAGATGGCCGCTGCAGGTTGATTCAACAGAGAATGGCTATATATTCTGCTGAAGCTATTTCAGCTGAGGGAAAGGTGCATCGGGAATGTCACACAAATAGTGTAATGGCAGCTCATTCCTTACTAGTGTACCTCAGAATACCATGTCAGTACATAACACAACTAGGTATTCACACCAAAACAAATCGAAACGTACAATTGTTCTAAACTATTAACACGTTTGGATCCCGTTAGAACAGAGCGTGTCCGTGCCGTAGCCGCATTAGGTTCCATGTTGAGGTTTTATTCGGGGTATGAATTGTTGTAGCTTTGTTAATTGGAGTTTAAACATGTAGCTGTGCGCATCGTGTGGCATGGATCTTTGTGCTACTGTATTTGAGTTGAAACAAATTGACGGTGGGAAATTGAATTGCATGAGGTGTGACTACAGTATTGAAATCAAACTGCTATGGATGTAGCAAACAAAAACCTGAGCCAACAAATACCTCGTATTTTGAACATTATTATTAATATGCATATGACTATTTAATTTAATTGCATGGATTATACAATTGCATCATGTTTGGTGAAGTATTAACATTGCTGTaatatttttattacatttggtTTCAAATGTGGCCAATTTTTACTTGGTACTGTCTTCTTTAGCATTTGGAAACAGCTTATTGTATTTCTTCATGTTTTCCCTCTGTTACTACCAAtggtttatatatacactagaagactgacagggggcgctgttttgAAGCCACCTCACCTTCATCTTGGCACTCCCTCAccgttgtaaaaaatattttggattgtatggaaatgcatttattaatgtttaCCTTTGATTTAGCCAagtttattctattacagacaccttaatgcatacttttaaagtATATTATGTCAGCTAAACATACACATTTTAAGTAAATAACACAAATAAAAACATGTTCCTTAAAGTATCATTTTTAAGTTCAAAACAAATATTCAAAtaaatgtaattttgtccttgaaacatttgaaTTGGAAtactgtccttgaaacatttcatTGAAATACTGTCGAaatccattcattcctatggaggactgctcccactggggagtgccaatatggccgaccagcGGCTTcaagcctctcattggccaatacatagcatagcaattcagggtttatatacatcattggttaCTACTCTTTTCTCATTAAGCTAGGTGAACTTGATGGACCTATACAGGCATGTTACTGGAAAATGTGCAATGTTTTTGTTAAGTTGAAATAAAAATGTGCTG
>TU306346
AAGAGATGGTACTTGCAAGTGCAGTTGTTAATTTGGATGCTTGGCTGATTTGGAGTCATGAAGTTAGCTAGTGTTGAGGGTCAAGGTGTTGGGAACCAGCAGGGCCTGTGGCTACGCTTGCAATGCAAATCGTTCGCTCCACTCCACTCCTTGTGCCTTGTTTGAAAGTCCTTATGAAAAATGCATGGCGTCGTCACACACTGAGATTCTTCTATAGTTTGAGAGATTCTATTTGACCATTCTGAGTTTGGTCTTGATCCCCTGTCTCAGTTAGAGAGTATTTAATACATGTAAGTTACGTTAGAAGTATTACTGACCCAGAAGAGTCGTTTTATAAGGCACGTGATTGGGAAAGAGATCAATCACACACATAGACAATGTGCCTTTGCAAAATTGTTCTGATCATGTCACGTTTTATGAATAATTTGCCCATTTACAATTAGGCTCCCATCCCATTGGTTTACTAATCTCAACGACGTGCTTGTTTTTAGTCTATGGCCTTTAGATGGCCGCTGCAGGTTGATTCAACAGAGAATGGCTATATATTCTGCTGAAGCTATTTCAGCTGAGGGAAAGGTGCATCGGGAATGTCACACAAATAGTGTAATGGCAGCTCATTCCTTACTAGTGTACCTCAGAATACCATGTCAGTACATAACACAACTAGGTATTCACACCAAAACAAATCGAAACGTACAATTGTTCTAAACTATTAACACGTTTGGATCCCGTTAGAACAGAGCGTGTCCGTGCCGTAGCCGCATTAGGTTCCATGTTGAGGTTTTATTCGGGGTATGAATTGTTGTAGCTTTGTTAATTGGAGTTTAAACATGTAGCTGTGCGCATCGTGTGGCATGGATCTTTGTGCTACTGTATTTGAGTTGAAACAAATTGACGGTGGGAAATTGAATTGCATGAGGTGTGACTACAGTATTGAAATCAAACTGCTATGGATGTAGCAAACAAAAACCTGAGCCAACAAATACCTCGTATTTTGAACATTATTATTAATATGCATATGACTATTTAATTTAATTGCATGGATTATACAATTGCATCATGTTTGGTGAAGTATTAACATTGCTGTaatatttttattacatttggtTTCAAATGTGGCCAATTTTTACTTGGTACTGTCTTCTTTAGCATTTGGAAACAGCTTATTGTATTTCTTCATGTTTTCCCTCTGTTACTACCAAtggtttatatatacactagaagactgacagggggcgctgttttgAAGCCACCTCACCTTCATCTTGGCACTCCCTCAccgttgtaaaaaatattttggattgtatggaaatgcatttattaatgtttaCCTTTGATTTAGCCAagtttattctattacagacaccttaatgcatacttttaaagtATATTATGTCAGCTAAACATACACATTTTAAGTAAATAACACAAATAAAAACATGTTCCTTAAAGTATCATTTTTAAGTTCAAAACAAATATTCAAAtaaatgtaatttttccttgaaacatttcatTGAAATACTGTCGAaatccattcattcctatggaggactgctcccactggggagtgccaatatggccgaccagcGGCTTcaagcctctcattggccaatacatagcatagcaattcagggtttatatacatcattggttaCTACTCTTTTCTCATTAAGCTAGGTGAACTTGATGGACCTATACAGGCATGTTACTGG
>TU306350
GGTGTGGCTCAGGTGCTCAACAGGCTGGATGGTAACCAGTTTGACGATGCAGACCAGAGACTGTTCGAGGCCTTTGTGATCTTCTGTGGCCTTGGCATCAACAACACCATCATGTACGACCAGGTGAAGAAGTCCTGGGCCAAACAGTCCGTGGCTCTCGACGTAAGCACCAATGTTCATTCCTTTTTATAGCACTTAAAGGGGGGCTGAACGCACCAATTCTGCATGTGTTTTTCTGCTGCTCCTTAAGAAAAATAAGATTTGGatcttgggggtgtggtttgatgtgccTGTGTTATATTTGCTTATCGTACCCTGGAAGTTACTGTTGGTTGTCACTCTTGAGACACCATAGCAACCTTACAG

Function

symbol description
pde11a Predicted to enable cGMP-stimulated cyclic-nucleotide phosphodiesterase activity. Predicted to be involved in negative regulation of cAMP-mediated signaling; negative regulation of cGMP-mediated signaling; and signal transduction. Human ortholog(s) of this gene implicated in primary pigmented nodular adrenocortical disease. Orthologous to human PDE11A (phosphodiesterase 11A).

NR:

description
dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0007165 signal transduction biological_process
GO:0046872 metal ion binding molecular_function
GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021597227.2 False 5635 mRNA 0.45 20 50378400 50436074
TU306346 False 1712 lncRNA 0.38 2 50378443 50380183
TU306350 True 366 lncRNA 0.48 2 50412651 50413170

Neighbor

gene id symbol gene type direction distance location
nfe2l2a LOC106586247 coding downstream 45494 50325109 ~ 50332906 (-)
evx2 evx2a coding downstream 253780 50119669 ~ 50124620 (-)
lnpa LOC100194569 coding downstream 278703 50084100 ~ 50099697 (-)
LOC110520125 atp5g3 coding downstream 396530 49979196 ~ 49981870 (-)
atf2 atf2 coding downstream 399508 49962467 ~ 49978892 (-)
LOC110520139 LOC106586251 coding upstream 4127 50440201 ~ 50442930 (-)
prkra LOC106586253 coding upstream 84191 50520265 ~ 50525331 (-)
LOC110520142 LOC106586254 coding upstream 98005 50534079 ~ 50542288 (-)
LOC110505276 NA coding upstream 106912 50542986 ~ 50543432 (-)
LOC110520143 LOC106586256 coding upstream 109992 50546066 ~ 50585895 (-)
G269649 LOC106586249 non-coding downstream 6374 50365876 ~ 50372026 (-)
G269634 NA non-coding downstream 44969 50333218 ~ 50333431 (-)
G269603 NA non-coding downstream 55274 50322767 ~ 50323126 (-)
G269604 NA non-coding downstream 55848 50321491 ~ 50322552 (-)
G269632 NA non-coding downstream 58201 50318737 ~ 50320199 (-)
G269761 NA non-coding upstream 94880 50530954 ~ 50531200 (-)
G269762 NA non-coding upstream 95197 50531271 ~ 50531890 (-)
G269779 ino80d non-coding upstream 164904 50600978 ~ 50605536 (-)
G269817 NA non-coding upstream 266172 50702246 ~ 50702996 (-)
G269865 NA non-coding upstream 342595 50778669 ~ 50778893 (-)
LOC110520121 LOC106581751 other downstream 476862 49895327 ~ 49901575 (-)
LOC110520119 NA other downstream 506755 49867187 ~ 49871681 (-)
LOC110520112 LOC106586230 other downstream 810926 49563841 ~ 49608114 (-)
LOC118944672 NA other downstream 875429 49494001 ~ 49503025 (-)
G268310 NA other downstream 882597 49495477 ~ 49495803 (-)
LOC110520160 LOC106586095 other upstream 692366 51126600 ~ 51130404 (-)
fgf9 NA other upstream 1037250 51471899 ~ 51478510 (-)
il1rl1 il1rl1 other upstream 1161325 51596933 ~ 51619476 (-)
LOC110520182 NA other upstream 2272109 52693956 ~ 52708816 (-)
G269687 NA non-coding upstream 5367 50418537 ~ 50418884 (-)

Expression


Co-expression Network