dnajc3a (dnajc3)


Basic Information

Item Value
gene id dnajc3a
gene name dnajc3
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 51111845 ~ 51126305 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021597284.2
CTCGCTTTATGTCTGGTTGGTTAACTGAGTAACGCTAGCTGTCATCTAGCTAAAAATGGGACTGTCAAGTAATTCGTGAGAGTTTGAATTGTCGTAGGTAGTATTTTCCTTTATTTCTAAGAACTATAGACAGTTACATTATGGTTGCAATAAACCCAGTTGTGCACAAAATTTTAAGTTATGTTCCTTTTCTTCTTGTTTTGATTGACCTGCGATACGAAGGGGTATGTGGCAAGGATGGAAGTTTGGAGAACCATTTGGAGATGGGGAAGAAACTCCTTGCTGCTGGACAGCTGGCTGATGCACTCTCTCATTTCCATGCTGCTATTGATGGGGATCCAAAGAACTACATGGCCTACTACAGGAGAGCGACAGTCTACCTGGCCATGGGCAAATCTAAATCTGCTCTGCCGGATCTGAGCAAAGTCATTGAACTCAAACCAGACTTCACATCGGCAAGACTTCAGAGAGGCAATCTACTCCTGAAGCAGGGGAGACTAGATGAAGCAGAGAGCGACTTTAAGAAAGTTCTCAATTCGAACCCTAGTGACAAAGATGAGAAGGAGGCCCAAAGTCGTCTCAAGAAATCTGATGAAATCCAGAGGTGGGTGACTCAGTCACGGGCTAACTTTGACCGCAAGGATTACATCACCGCTGCTGCCCAACTGGACCTAATTATTGAAACGTGTGTGTGGGACGTCAGCTCTAGAGAGCTGCGGGCAGAGTGCTTCATCCAGATGGGAGAGATGGGCAAGGCCATCAGTGACCTGACGGCTGCCTCCAAACTGAAGAGTGACAACACCCAGGCCTTCTACAAACTCAGCACCATCTACTACCACCTGGGTGACCACGAAATGTCCCTCAAtgagGTTCGAGAATGTCTGAAGCTGGACCCAGACCATGAACAGTGTTACAGCCACTACAAACAAGTCAAGAAGCTCAACAAACACATCCAGTCTGCAGAGGAGTTGATCCAGCAGCAGAGGTATGGAGATGCAGTGAGTAAATACGAGTCCGTGATTAAGACTGAGCCAAATGTTCCCCAGTACTCGCACCATGCAAAGGAGCGCATCTGCCACTGTCTGGCACAGGAGCAGCAGGATGTAAGCAGAGCCATCACAGTGTGCAGTGAGGTCCTTCAGTCTGACCCTCAGAATGTGAATGTGTTGAAGGACAGAGCAGAGGCCTACCTACTGGATGAACAGTACGAGGAAGCTATCAAGGACTATGAGACTGCCCGCGAGCACAGTGAGAATGACCGGCAGATCAAGGAAGGGCTTGAGAAAGCACAGCGCCTCCTCAAACAGTCCCAGAAGAGAGACTACTACAAGATCCTGGGCATTAAGAGGACTGCCCAGAAGAAGGAGATCGTAAAGGCCTACAGGAAGCAGGCCCAGCAGTGGCACCCAGACAACTTCCAGGATCCTGTGGAGAAGAAGAAGGCAGAGAAGAAGTTCATTGACATTGTTCAGGCCAAGGAAGTGCTCACTGATCCAGagatgaggcagaAGTTTGACAATGGCGAGGACCCCATGGACCCAGAGAGCCAGCAGGGTGGACACCATCAGAACTTTCACAGTGGTTTCCAGGGCTTTAACCCCTTCAGCTCCGGACAGTTCAACTTCAAATTCAACTACCAGTGAGCCTTAAGAGAGGAGCTTCTGGGCATTCATCCAGTATGGTTGTAGCTTAACCTCTCTCTCGTTCAGGGAGAGCACAATTACCTTCATGATGACATGTCTGAGACAACTTGTACAGATTAAAGATGTCTTTTCTGTTGAATGATATGTTTTTGGAGCTACATTCTCTGATGCGactttttaacatttttaatCTTTGCAGCAACTCCCATCTTCAATTTGAGTTCTGGGTTAATTCCAAAGCGACTACACCTTTTGTGGTGTACACTGAAAATTGGTATCCATTCCTAATGTGTACATAGATACAGTACTATTTTTATATGAATGGAGTCATTGCGAATTGTAAATAAAGATCTATTTATGCTTATAGTA
>XM_021597283.2
GACTCGCTTTATGTCTGGTTGGTTAACTGAGTAACGCTAGCTGTCATCTAGCTAAAAATGGGACTGTCAAGTAATTCGTGAGAGTTTGAATTGTCGTAGGTAGTATTTTCCTTTATTTCTAAGAACTATAGACAGTTACATTATGGTTGCAATAAACCCAGTTGTGCACAAAATTTTAAGTTATGTTCCTTTTCTTCTTGTTTTGATTGACCTGCGATACGAAGGTAAGCCTTCTCAGACAATGGATTTCAACCTATGTTTTATTACAGGGGTATGTGGCAAGGATGGAAGTTTGGAGAACCATTTGGAGATGGGGAAGAAACTCCTTGCTGCTGGACAGCTGGCTGATGCACTCTCTCATTTCCATGCTGCTATTGATGGGGATCCAAAGAACTACATGGCCTACTACAGGAGAGCGACAGTCTACCTGGCCATGGGCAAATCTAAATCTGCTCTGCCGGATCTGAGCAAAGTCATTGAACTCAAACCAGACTTCACATCGGCAAGACTTCAGAGAGGCAATCTACTCCTGAAGCAGGGGAGACTAGATGAAGCAGAGAGCGACTTTAAGAAAGTTCTCAATTCGAACCCTAGTGACAAAGATGAGAAGGAGGCCCAAAGTCGTCTCAAGAAATCTGATGAAATCCAGAGGTGGGTGACTCAGTCACGGGCTAACTTTGACCGCAAGGATTACATCACCGCTGCTGCCCAACTGGACCTAATTATTGAAACGTGTGTGTGGGACGTCAGCTCTAGAGAGCTGCGGGCAGAGTGCTTCATCCAGATGGGAGAGATGGGCAAGGCCATCAGTGACCTGACGGCTGCCTCCAAACTGAAGAGTGACAACACCCAGGCCTTCTACAAACTCAGCACCATCTACTACCACCTGGGTGACCACGAAATGTCCCTCAAtgagGTTCGAGAATGTCTGAAGCTGGACCCAGACCATGAACAGTGTTACAGCCACTACAAACAAGTCAAGAAGCTCAACAAACACATCCAGTCTGCAGAGGAGTTGATCCAGCAGCAGAGGTATGGAGATGCAGTGAGTAAATACGAGTCCGTGATTAAGACTGAGCCAAATGTTCCCCAGTACTCGCACCATGCAAAGGAGCGCATCTGCCACTGTCTGGCACAGGAGCAGCAGGATGTAAGCAGAGCCATCACAGTGTGCAGTGAGGTCCTTCAGTCTGACCCTCAGAATGTGAATGTGTTGAAGGACAGAGCAGAGGCCTACCTACTGGATGAACAGTACGAGGAAGCTATCAAGGACTATGAGACTGCCCGCGAGCACAGTGAGAATGACCGGCAGATCAAGGAAGGGCTTGAGAAAGCACAGCGCCTCCTCAAACAGTCCCAGAAGAGAGACTACTACAAGATCCTGGGCATTAAGAGGACTGCCCAGAAGAAGGAGATCGTAAAGGCCTACAGGAAGCAGGCCCAGCAGTGGCACCCAGACAACTTCCAGGATCCTGTGGAGAAGAAGAAGGCAGAGAAGAAGTTCATTGACATTGTTCAGGCCAAGGAAGTGCTCACTGATCCAGagatgaggcagaAGTTTGACAATGGCGAGGACCCCATGGACCCAGAGAGCCAGCAGGGTGGACACCATCAGAACTTTCACAGTGGTTTCCAGGGCTTTAACCCCTTCAGCTCCGGACAGTTCAACTTCAAATTCAACTACCAGTGAGCCTTAAGAGAGGAGCTTCTGGGCATTCATCCAGTATGGTTGTAGCTTAACCTCTCTCTCGTTCAGGGAGAGCACAATTACCTTCATGATGACATGTCTGAGACAACTTGTACAGATTAAAGATGTCTTTTCTGTTGAATGATATGTTTTTGGAGCTACATTCTCTGATGCGactttttaacatttttaatCTTTGCAGCAACTCCCATCTTCAATTTGAGTTCTGGGTTAATTCCAAAGCGACTACACCTTTTGTGGTGTACACTGAAAATTGGTATCCATTCCTAATGTGTACATAGATACAGTACTATTTTTATATGAATGGAGTCATTGCGAATTGTAAATAAAGATCTATTTATGCTTATAGTA
>XM_036974552.1
GGCCCAATCAGAGCCACCCACGACCGGTGGACTCGCTTTATGTCTGGTTGGTTAACTGAGTAACGCTAGCTGTCATCTAGCTAAAAATGGGACTGTCAAGTAATTCGTGAGAGTTTGAATTGTCGTAGGGGTATGTGGCAAGGATGGAAGTTTGGAGAACCATTTGGAGATGGGGAAGAAACTCCTTGCTGCTGGACAGCTGGCTGATGCACTCTCTCATTTCCATGCTGCTATTGATGGGGATCCAAAGAACTACATGGCCTACTACAGGAGAGCGACAGTCTACCTGGCCATGGGCAAATCTAAATCTGCTCTGCCGGATCTGAGCAAAGTCATTGAACTCAAACCAGACTTCACATCGGCAAGACTTCAGAGAGGCAATCTACTCCTGAAGCAGGGGAGACTAGATGAAGCAGAGAGCGACTTTAAGAAAGTTCTCAATTCGAACCCTAGTGACAAAGATGAGAAGGAGGCCCAAAGTCGTCTCAAGAAATCTGATGAAATCCAGAGGTGGGTGACTCAGTCACGGGCTAACTTTGACCGCAAGGATTACATCACCGCTGCTGCCCAACTGGACCTAATTATTGAAACGTGTGTGTGGGACGTCAGCTCTAGAGAGCTGCGGGCAGAGTGCTTCATCCAGATGGGAGAGATGGGCAAGGCCATCAGTGACCTGACGGCTGCCTCCAAACTGAAGAGTGACAACACCCAGGCCTTCTACAAACTCAGCACCATCTACTACCACCTGGGTGACCACGAAATGTCCCTCAAtgagGTTCGAGAATGTCTGAAGCTGGACCCAGACCATGAACAGTGTTACAGCCACTACAAACAAGTCAAGAAGCTCAACAAACACATCCAGTCTGCAGAGGAGTTGATCCAGCAGCAGAGGTATGGAGATGCAGTGAGTAAATACGAGTCCGTGATTAAGACTGAGCCAAATGTTCCCCAGTACTCGCACCATGCAAAGGAGCGCATCTGCCACTGTCTGGCACAGGAGCAGCAGGATGTAAGCAGAGCCATCACAGTGTGCAGTGAGGTCCTTCAGTCTGACCCTCAGAATGTGAATGTGTTGAAGGACAGAGCAGAGGCCTACCTACTGGATGAACAGTACGAGGAAGCTATCAAGGACTATGAGACTGCCCGCGAGCACAGTGAGAATGACCGGCAGATCAAGGAAGGGCTTGAGAAAGCACAGCGCCTCCTCAAACAGTCCCAGAAGAGAGACTACTACAAGATCCTGGGCATTAAGAGGACTGCCCAGAAGAAGGAGATCGTAAAGGCCTACAGGAAGCAGGCCCAGCAGTGGCACCCAGACAACTTCCAGGATCCTGTGGAGAAGAAGAAGGCAGAGAAGAAGTTCATTGACATTGTTCAGGCCAAGGAAGTGCTCACTGATCCAGagatgaggcagaAGTTTGACAATGGCGAGGACCCCATGGACCCAGAGAGCCAGCAGGGTGGACACCATCAGAACTTTCACAGTGGTTTCCAGGGCTTTAACCCCTTCAGCTCCGGACAGTTCAACTTCAAATTCAACTACCAGTGAGCCTTAAGAGAGGAGCTTCTGGGCATTCATCCAGTATGGTTGTAGCTTAACCTCTCTCTCGTTCAGGGAGAGCACAATTACCTTCATGATGACATGTCTGAGACAACTTGTACAGATTAAAGATGTCTTTTCTGTTGAATGATATGTTTTTGGAGCTACATTCTCTGATGCGactttttaacatttttaatCTTTGCAGCAACTCCCATCTTCAATTTGAGTTCTGGGTTAATTCCAAAGCGACTACACCTTTTGTGGTGTACACTGAAAATTGGTATCCATTCCTAATGTGTACATAGATACAGTACTATTTTTATATGAATGGAGTCATTGCGAATTGTAAATAAAGATCTATTTATGCTTATAGTA

Function

symbol description
dnajc3 Predicted to enable several functions, including chaperone binding activity; misfolded protein binding activity; and protein kinase inhibitor activity. Involved in negative regulation of apoptotic process and negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation. Located in extracellular exosome and membrane.

NR:

description
dnaJ homolog subfamily C member 3 isoform X2

GO: NA

KEGG:

id description
K09523 DNAJC3; DnaJ homolog subfamily C member 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021597284.2 False 2012 mRNA 0.47 12 51111845 51126274
XM_021597283.2 False 2059 mRNA 0.46 12 51111845 51126276
XM_036974552.1 True 1918 mRNA 0.48 12 51111845 51126305

Neighbor

gene id symbol gene type direction distance location
LOC110504222 LOC106586266 coding downstream 52625 50960859 ~ 51059220 (-)
LOC110520155 LOC106586265 coding downstream 160817 50912625 ~ 50951028 (-)
LOC110520154 rap2a coding downstream 200144 50898557 ~ 50911701 (-)
farp1 LOC106586263 coding downstream 215563 50788788 ~ 50896282 (-)
LOC110520150 LOC106586262 coding downstream 323624 50665795 ~ 50788221 (-)
LOC110520160 LOC106586095 coding upstream 295 51126600 ~ 51130404 (-)
cldn10b LOC106586096 coding upstream 4328 51130633 ~ 51135461 (-)
LOC110520166 LOC106586272 coding upstream 150616 51276921 ~ 51389582 (-)
LOC110504232 LOC106586097 coding upstream 337906 51464211 ~ 51470676 (-)
fgf9 NA coding upstream 345843 51471899 ~ 51478510 (-)
G269981 NA non-coding downstream 88551 51023084 ~ 51023294 (-)
G269980 NA non-coding downstream 88907 51022734 ~ 51022938 (-)
G269962 NA non-coding downstream 127424 50984213 ~ 50984421 (-)
G269954 NA non-coding downstream 142300 50969122 ~ 50969545 (-)
G270057 NA non-coding upstream 10621 51136926 ~ 51137490 (-)
G270067 NA non-coding upstream 20712 51147017 ~ 51147288 (-)
G270091 NA non-coding upstream 43904 51170209 ~ 51171519 (-)
G270098 NA non-coding upstream 54784 51181089 ~ 51181542 (-)
G270105 dct non-coding upstream 69027 51195332 ~ 51267591 (-)
LOC110520139 LOC106586251 other downstream 668973 50440201 ~ 50442930 (-)
LOC110520121 LOC106581751 other downstream 1210307 49895327 ~ 49901575 (-)
LOC110520119 NA other downstream 1240200 49867187 ~ 49871681 (-)
LOC110520112 LOC106586230 other downstream 1544371 49563841 ~ 49608114 (-)
LOC118944672 NA other downstream 1608874 49494001 ~ 49503025 (-)
il1rl1 il1rl1 other upstream 471094 51596933 ~ 51619476 (-)
LOC110520182 NA other upstream 1581878 52693956 ~ 52708816 (-)
G272713 LOC106586324 other upstream 2123621 53249926 ~ 53251084 (-)

Expression


Co-expression Network