fgf9


Basic Information

Item Value
gene id fgf9
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 51471899 ~ 51478510 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036974557.1
TGAATGACATTATTTCATATGATTTAATATATGTTATTACTGATATTAAGTCTGCTCCATTTGAAGTAGAAATCGAATATAAAGTTTATGACATGACACAAAACATTTAATAATTTTTAGACTACAGGAAATAGGCTGAATTCTGTGTTAAACAACTGCAGTCAGGCTGCTTTGATTGTCAACAGCCTTGTGGCTATTGTAGTTTTTGACTGTAGAAAAACAGGAATCTCTATTGTTGCCCCAGTTGAGGCAGGCATGCGAGAGAGGGGCATCTGTGATGGTGCAATGAActgtctgagcaggggaacattCAGTATAACATtttcatgatgatgatgaggatcaTCGTTTTGATCATTTTTATTGATAACAAAAAGCTAAATTGTACATAATTGTTTATCATCAGTAATTATTTCACCTGCTATTTAAAATGACAATAATTCAAAGAATGATCACAGGACCACTTGTTTGCTTTTCTTTATCAATCGACCTTTCACTTATCTGAACGATACGATTTGGCTCACAGACAGACGTCAGTCTCATAAAGATAAAAAACGAGATGGAGTTTTCCTTGCTTTATCTCAATGATCAGTCTCACATTTTTTCAGACTCAAAGGTCAGGTGAGGGTCTACGCAACAAACGTCCTGTATCACCACCAGTTTTGAATCTTGTCTGAGACACGTAATAACCAGCCTAAATGCACTtaatcacactctctctctctctgtatttgatTGCAGACCAGCACAGACCAGTGATTAGGCCTGCCATGCAATCTCACCGATACTGTAGGGTACAGTAGCCTTACGCATGTCTGGTGGGCAGAGAATGAGGATGAGTTTTTATTTCGTTTTTATCTGATaaagccctcaaactcaactctggacctcgaagctagttccactgcatttttctAATCAGGGACCGATTAAGAAGTGGGACACccggtgtgtgcaattaattatcaggtagaagagaaaaccagcaggctccggacctcgtagatTAAGTGTTGAGTACCCCTGTGATAAAGCATGCATATGTTTTGTCAGAAGCAATATTGTTGTTTATTATAATGCCTATGTGTCTTAGAATTTCCAACACTGTATGTCAAAAGACTGTCAAAGACACACACGCATACCCAAACAACAACGTCATTAGGTTCATCTGTCTCTGTACTTTTCCCTGATAAACTTATTCAAAATAATGATAGTATACCAACTCAAATCAGGTTAGTGTTACAGCATTCTAATGGTATATCTTTTACAACAAAACTCTTCATCAGGTTAATCTGTATTTGAACAATTAGTGACATGGGAAGGGCATGTACTGTAAGTCTAACCAGGGCCACCTCTCAAAAGAGACATAGAGCAAAGTGTATATTATAAATGTGATGGCATAcggacagtggtgtgtgtgtgtgtgtgtgtgtgtgtgcagtgtcaAAGCAAAGTGAGAGGGGAGGAAGTGGATAGGGCAGAGAGAAGGCACACTGACCATGAGGAGCAGGGGTGTTTATTTTGACTGGAGTACATCTCGTTCAGCAGCATTGGTTGGAGGAGGATTAGGAAAAGTATCAAGGGTTGGGTGCACTTTGACAGCCGCAACACCACAACTTGACTGGTGGGTCTGGTGACAGGAGTGGGTCGAATGGAAGGACTGTGTTCTTAACTTCACTGTATTAGCCTTTGCAGTCAACATGGCAGAATGGAACTGGTGCCCATTGATTTGTATCTAACAGACCAGGGTTCAAGTACTATTTCAAATATCGCAATTACTTTCACATACATTCAAAGTAAGTACTCAGATCTATTTTTATTTGAATAGACAAGTAGTTGAATGTTtcaatgtatttggaaatacacttggagAGTATTTGAAAATAGTCAAATACACTGACTCAAATACACTCCCATGCATGTTACCCAGgtatttgaaaatagtatttgaaataagtATTAGAAAATAATCTCAAATACATTTTGGTAGACTATTTGGTTTTTACAAATAACCATTCACTCAAATAAAAGTTATTGTTTTGGGCTGAGTATATCATAATCAAATACACAGAGAAAAGTATTTGACATAAcagatactcaaatacacatgtatttgaacccaggtctggcatCTAATGCTGATCACTATGGATGCTCACCTGCTGTTCCCGTGTCTGATGATGCTACGGGCTATGTGTATGGATTATCACTGTGCAGATGCAAATGAAGACCAGGGCAATCAACTGCGAGTCCTCTGGAGGTTGTCAATGAAAGACCCAAAGCAGAAAGgtgtGCCACCTCCTCATCCAATCAGAGGATTGGTCAAACAACAGCTGCTGTACTGCCGTGTTGGGATAGGATACCATCTCCAGGTCCTGTCCAATGGAACTATAGGAGGAGTGCATGAACCAACTGAACATAGCTTGCTGAAGGTGTTTGCCATGAAGCGTGGTGTTGTGGGCATCAGAGGCATCAAGACTGGCTTGTATATCTGTATGAGCCAAGAGGGCATCGCACACGGAGCAGTACAGTTCTCATCTGAATGTCTGTTCAAGGAGAGCCTGGAGGAGAACCACTACACCACCTTTTCCTCCCTGTCTCATCCAGGCATCTACTTGGCCCTGTCCCATAAAGGAGAGGCCAAGAGGGGGACCAGCGTTGGGAGACTCCAGCCCTGCACACACTTCCTCCCTCGCAGAGCTCCATAAGTAACCCCTGTGCAACCCTTTTACAACCTTTCTACAACCAATGACCCCAACCCAGGGGTCACAACTGTAACTGTGAGGAGAATCCTGTAAATCCCTACAACGTTGAAATGACCCAAACCGTTGGGCATTTCACCCTTTTACCCAGCGTGACTGATATACCTGAAATGACATTGGAAACAGTGTAGCAACTGAAGAAAAGCAAATTGACATATAATGGTAGACTAACTCTAAGGGTCAACACACACACGGTCCTTGTGATGCTCTGTTAGCATAATTGGATgtaactggactggactggattTCGAACATCTGTTCGAAATATGAGGATATTTTTGGACAAAAATATTAGTTTTTTAAATCTACAATTTCAGTCAGATTGAGTTGTGGTCATTACACTTGccttttttttcaacttttcacattattcattatatttatcagggttggccctagccttttgggggccctaagcgggATTTGTTTGGGGGGCCCCCCACCTCAcgggcaaaacattttagtggcccccctCATGATGTTTGAAAGAAAAGTGATGGTGGTTGAAAtgttcatttcctgcaattctacacattttgccatcaGAAGTAGAGAACATGTTACCAAATGTtgccattttatttttttaaattatgtaattctatacattttgagAGAACAAAATAGCAGTTTTACAGCACATTTCCTGAATATCTACCCATTtttccatgacttatgccatgttgaTAATATCTGAGTGAgtgtgactaacaaaatcaatgtgggccccctggaggtcagggcccctggacaCCTTCACTGCCTGCCTGGTCAGTATTCATCCATGATTACTAagttagatagctggctagacaaaCTTACCAATCAAAACATTTTTGTGACTGTCATAAcagacataacaagagaaaaactgctgatgtacAACCCAATTTTGGGGGTTTTGGGAAAGGCAGCCCTATGCGACCACTTATGTTGCATATGCCTGCAGCCAGCCCTGATATTTATTACAATCTACTACTGTATGAATATACACTTCCCTCtgtatgtatttggacagtgttgcaaaaataaatatttgtttgGTTCTATACTCCAGCAAAAAAtgtcacccccccacacacacacacttaaaaagTAGTCAGAAGTTTAGtattttggtcccatattcctagcacgcaatgacttcatcaagcttgtgactacaaactCGTTGAATGCATTTACAGTTGGTTTCAGTTGTGTTTTACTTTATGTTTTTGCCCAATAGGAACTGAATGGTGAATGATGACTGCAGTAATTTAATTCTATGTGAGAAGATACAGTAAGATAATTCtgaacatttctacatttctaaatctgaggtcttggctgatttcttttgatattaccatgatgtcaa
>TU307413
CATTTACAGTTGGTTTCAGTTGTGTTTTACTTTATGTTTTTGCCCAATAGGAACTGAATGGTGAATGATGACTGCAGTAATTTAATTCTATGTGAGAAGATACAGTAAGATAATTCtgaacatttctacatttctaaatctgaggtcttggctgatttcttttgatattaccatgatgtcaagcaaagaggcactgaatttgaaggtaggccttgaaatacatccacaggtacacctccaattaactcaaatgatgtcaattagcctatcagaagcttctaaagccatgacataattttctggaattttccaagctgtttaaatgcacagtcaacttagtgtatgtacacttctgacccactggaattgtgatacagtgaattataagtgaaataatctgtatgtaaaccatttttggaaaaatgatttgt
>TU307414
GTTGTGTCAAAGGAACTGTCCATTTCAGAGAACAGATTTGAAACAGACCTGGAAGCCCTTGATGCTTGCTGAAGGTGTTTGCCATGAAGCGTGGTGTTGTGGGCATCAGAGGCATCAAGACTGGCTTGTATATCTGTATGAGCCAAGAGGGCATCGCACACGGAGCAGTACAGTTCTCATCTGAATGTCTGTTCAAGGAGAGCCTGGAGGAGAACCACTACACCACCTTTTCCTCCCTGTCTCATCCAGGCATCTACTTGGCCCTGTCCCATAAAGGAGAGGCCAAGAGGGGGACCAGCGTTGGGAGACTCCAGCCCTGCACACACTTCCTCCCTCGCAGAGCTCCATAAGTAACCCCTGTGCAACCCTTTTACAACCTTTCTACAACCAATGACCCCAACCCAGGGGTCACAACTGTAACTGTGAGGAGAATCCTGTAAATCCCTACAACGTTGAAATGACCCAAACCGTTGGGCATTTCACCCTTTTACCCAGCGTGACTGATATACCTGAAATGACATTGGAAACAGTGTAGCAACTGAAGAAAAGCAAATTGACATATAATGGTAGACTAACTCTAAGGGTCAA

Function

NR:

description
fibroblast growth factor 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036974557.1 False 4122 mRNA 0.40 4 51472148 51478510
TU307413 False 431 lncRNA 0.34 1 51471899 51472329
TU307414 True 588 TUCP 0.49 3 51473324 51474139

Neighbor

gene id symbol gene type direction distance location
LOC110504232 LOC106586097 coding downstream 1472 51464211 ~ 51470676 (-)
LOC110520166 LOC106586272 coding downstream 82566 51276921 ~ 51389582 (-)
cldn10b LOC106586096 coding downstream 336687 51130633 ~ 51135461 (-)
LOC110520160 LOC106586095 coding downstream 341744 51126600 ~ 51130404 (-)
dnajc3a dnajc3 coding downstream 345843 51111845 ~ 51126305 (-)
LOC110520170 il1rl1 coding upstream 72187 51550697 ~ 51559339 (-)
il1rl1 il1rl1 coding upstream 118423 51596933 ~ 51619476 (-)
LOC110520172 LOC106586277 coding upstream 152279 51630789 ~ 51680912 (-)
LOC100135875 LOC100135875 coding upstream 210325 51688835 ~ 51734299 (-)
LOC110520176 LOC106586280 coding upstream 339054 51817564 ~ 51844042 (-)
G270582 NA non-coding downstream 16182 51455767 ~ 51455966 (-)
G270571 NA non-coding downstream 30571 51441320 ~ 51441577 (-)
G270286 LOC100194703 non-coding downstream 52375 51419434 ~ 51419773 (-)
G270267 NA non-coding downstream 65336 51406595 ~ 51406812 (-)
G270254 NA non-coding downstream 73501 51398431 ~ 51398647 (-)
G270611 LOC106586273 non-coding upstream 12084 51490594 ~ 51498737 (-)
G270567 NA non-coding upstream 50939 51529449 ~ 51532544 (-)
G270621 NA non-coding upstream 59137 51537647 ~ 51538128 (-)
G270622 NA non-coding upstream 59826 51538336 ~ 51538639 (-)
G270625 NA non-coding upstream 64293 51542803 ~ 51543313 (-)
LOC110520139 LOC106586251 other downstream 1029276 50440201 ~ 50442930 (-)
LOC110520121 LOC106581751 other downstream 1570610 49895327 ~ 49901575 (-)
LOC110520119 NA other downstream 1600503 49867187 ~ 49871681 (-)
LOC110520112 LOC106586230 other downstream 1904674 49563841 ~ 49608114 (-)
LOC110520182 NA other upstream 1229673 52693956 ~ 52708816 (-)
G272713 LOC106586324 other upstream 1771416 53249926 ~ 53251084 (-)
G274344 LOC106586294 other upstream 3201408 54679918 ~ 54682805 (-)
LOC110520227 plekhm3 other upstream 3624984 55068639 ~ 55122013 (-)
fgf9 NA other upstream 995 51471899 ~ 51478510 (-)

Expression


Co-expression Network