LOC110520181 (adprh)


Basic Information

Item Value
gene id LOC110520181
gene name adprh
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 52686923 ~ 52692178 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021597319.2
TTTTTTAAGGAAGTGCTTTTCATTCGCTCGTCGTAGTTTAATTGTTTCCTTGTATGGAGCTGAGCGGGATTGGATTCTACGTAATCGAAACTACACAATAAGAGGAAGGGAACCGAACCTCAAGGTCTGCCTATCAACCACCAGCACAAGAAGTGATTGAACACCAACCAGATCTCACCATGTCAGACACGGTCCCCCTGGAACAGAGGTACAAGGCCAGCATGGTCCTGAGTGGAGCAGGAGATGCCCTGGGCTACAACCATGGTACCTGGGAATTTGAAAATGATGGAGTGTTAATACATGAGCAAGTTCAGAAGAGAGGAGGTCTAGAGAAGCTGGATGCCATAGACTTCCCTGTTAGTGATGACACCGTCATGCACCTGGCTACAGCTGAGGCTCTGGTCAAGGTGGGGGAAGGGGCATCCCTCCCTGTGCTGTATCAAGTCCTGGTGGAGAAGTACATTGTAAGCATGACAGACATGGCTGGAAGAGGAGCAGGCCTCACCTGCCGCAACAGTGTTGCAAGGCACAGACAGAGAACTGACGAGGACATTAAGATTCCCTTCGACAAGAGGGGCGGAGGGTGTGGGGCAGCCATGAGGGCCATGTGTATCGGCCTGCGCTTCCCCGACCCTGAGCAGGAGCACCTGCTGATAGCAGTAAGTGTGGAGAGTGGGCGTCtgacccaccaccaccccacaggCTACCTGGGAGCCCTGGCTGCAGCCCTGTTCACGGCCTACGCAGTGAGGGGCACCCTACCTGTGGAGGCCTGGGGACACAGACTCATGGAGGTCCTGGACAAAGCCAAGGAGTACGTCAGGCATTCGGGCAATTGTGTGGAGCTGAACATGGCGCACTGGGACTACTTTGGAATTCAGTGGAAGTCCTATTTAGAAAAAAGAGGCATTCTGGATGGAAAGAGCAAACCTCAGTTCCCAGAGTCCTACggtgtgaaggagagggagagtttCTATAGGGCGGTGAGCTTCAAGGGTTGTGGTGGCGCCAGTGGGCATGATGCTCCCATGATAGCTTACGATGCCCTCCTGAGGGCAGGTGACTCCTGGGTTGAGCTGGCCAATCATGGCTTCTTCCATGGCGGGGACAGCGACTCCACGGCCGTGATCGCTGCTGCCTGGTGGGGCGCACTGTTCGGCTTCAGAGGGGTGCCAAAGATCAACTACCAGAGGCTTGAGTACCGTGACAGACTATCCAAACTAGGGGAACAGCTATACAAGCTCAGGGGAAAACCTCTAGGTTCTTTGAAAGTGTGATGCAAATTAAACCAATAGATGGTTAAAGGTGAAATTCATTACATTTCCTGCAGATCTGGAATTTCAGCTACTTAAACTTTTTTTGACACTAATTTTGCATCCCTTGgtttttttaaaacatatttttaaagAATATTACTGGATCTGGAAAGATTTATAGAGTATTTATGATCTCAAACTGCAGTctacctactgactaggagatgGAGCCAGAATGTTCTGTATAAtaacaaacattttctgtaatggcaacatttttttatttatttccagCCTATAATCAAGTCTTCACTAACATACATTGATGCTGCAGTTGTTGCACTATTATTGTACCATTTTAGCTATGGCAGA

Function

symbol description
adprh Predicted to enable GTPase activator activity. Predicted to be involved in activation of GTPase activity and intracellular protein transport. Predicted to act upstream of or within protein de-ADP-ribosylation. Is expressed in several structures, including adaxial cell; lens; liver; musculature system; and notochord. Orthologous to human ADPRH (ADP-ribosylarginine hydrolase).

NR:

description
protein ADP-ribosylarginine hydrolase-like

GO:

id name namespace
GO:0051725 protein de-ADP-ribosylation biological_process
GO:0003875 ADP-ribosylarginine hydrolase activity molecular_function
GO:0000287 magnesium ion binding molecular_function

KEGG:

id description
K01245 ADPRH; ADP-ribosylarginine hydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021597319.2 True 1628 mRNA 0.49 4 52686923 52692178

Neighbor

gene id symbol gene type direction distance location
LOC110520175 LOC106586279 coding downstream 611247 51956334 ~ 52075676 (-)
LOC110520176 LOC106586280 coding downstream 844075 51817564 ~ 51844042 (-)
LOC100135875 LOC100135875 coding downstream 952624 51688835 ~ 51734299 (-)
LOC110520172 LOC106586277 coding downstream 1006011 51630789 ~ 51680912 (-)
il1rl1 il1rl1 coding downstream 1067447 51596933 ~ 51619476 (-)
LOC110520182 NA coding upstream 12774 52693956 ~ 52708816 (-)
gtdc1 gtdc1 coding upstream 88603 52780781 ~ 52826389 (-)
zeb2a LOC106586328 coding upstream 135605 52827783 ~ 52875770 (-)
LOC110520193 LOC106586318 coding upstream 692363 53384541 ~ 53394318 (-)
LOC110520195 LOC106586316 coding upstream 845499 53537677 ~ 53562438 (-)
G271968 NA non-coding downstream 4290 52675119 ~ 52682633 (-)
G271959 NA non-coding downstream 13808 52672693 ~ 52673115 (-)
G271930 NA non-coding downstream 32816 52653877 ~ 52654107 (-)
G271911 NA non-coding downstream 47110 52639494 ~ 52639813 (-)
G271901 LOC100136012 non-coding downstream 51545 52635150 ~ 52635378 (-)
G272408 NA non-coding upstream 78154 52770332 ~ 52770543 (-)
G272412 NA non-coding upstream 80908 52773086 ~ 52773290 (-)
G272384 NA non-coding upstream 83415 52775593 ~ 52776534 (-)
G272417 NA non-coding upstream 96823 52789001 ~ 52789228 (-)
fgf9 NA other downstream 1212784 51471899 ~ 51478510 (-)
LOC110520160 LOC106586095 other downstream 1557613 51126600 ~ 51130404 (-)
LOC110520139 LOC106586251 other downstream 2244051 50440201 ~ 50442930 (-)
LOC110520121 LOC106581751 other downstream 2785385 49895327 ~ 49901575 (-)
G272713 LOC106586324 other upstream 557748 53249926 ~ 53251084 (-)
G274344 LOC106586294 other upstream 1987740 54679918 ~ 54682805 (-)
LOC110520227 plekhm3 other upstream 2411316 55068639 ~ 55122013 (-)
G275250 NA other upstream 2717965 55410143 ~ 55411487 (-)

Expression


Co-expression Network