LOC110520182


Basic Information

Item Value
gene id LOC110520182
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 52693956 ~ 52708816 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036964942.1
TTACTGCACTAGCTCGTATTGGGGACATTCAATAATTCTACACAATACATCCATATCTCTACATTCTGTGACGTTTGTCTTTTATCATTGATGGTTCAGTGACTCTCATTGGGGTTGACCGCCTCATATCTCGTCTCAACAGCTTTTTTCTGTATTTTATATTAATCAACATTCAATGTCACATTCAATTAGTCAATGATCCAATGGAATCTCTTACAGAAGTGATTGAACACCATCCAGATCTCACCATGTCAGACACGGTCCCCCTGGAACAGAGGTACAAGGCCAGCATGGTCCTGAGTGGAGCAGGAGATGCCCTGGGCTGCAACCATGGTACCTGGGAATTTGAAAATGATGGAGTGTTAATACATGAGCAAGTTCAGAAGAGAGGAGGTCTAGAGAAGCTGGATGCCATAGACTTCCCTGTTAGTGATGACACCGTCATGCACCTGGCTACAGCTGAGGCTCTGGTCAAGgtaggggagggggaaggggcgTCCCTCCCTGTGCTGTATCGAGCCCTGGTGGAGAAGTACATTGTAAGCATGACAGACATGGCTGGAAGAGGAGCAGGGGACCTACGTGGTTCTGGTACCGGTTCTGTGGACACCcaccatgctctacgtGAGGGGCACCCTGCCTGTGGACACAGACTCATGGAGGTCCTGGACAAAGCCAAGGAGTACGTCAGGCATTCGGGCAATTGTGTGGAGCTGAACATGGCGCACTGGGACTACTTTGGAATTCAGTGGAAATCCTATTTAGAAAAGAGAGGCATTCTGGATGGAAAGAGCAAACCTCAGTTCCCAGACTTCTACggtgtgaaggagagggagagtttCTATAGGGCGGTGAGCTTCAAGGGTTGTGGTGGCGCCAGTGGGCATGATGCTCCCATGATAGCTTACGATGCCCTCCTGAGGGCAGGCGACTCCTGGGTTGAGCTGGCCAATCATGGCTTCTTCCATGGCGGGGACAGCGACTCCACGGCCGTGATCGCTGCTGCCTGGTGGGGCGCACTGTTCGGCTTCAGAGGGGTGCCAGAGATCAACTACCAGAGGCTTGAGTACCGTGACAGACTATCCAAACTAGGGGAACGGCTATACAAGCTCAGGGGGAAACATCTAGGTTCTTTGAAAGAGTGAAGTAAATGAAACCAAGATGGTTAAAGGTGAAATTCATTACATATCCTGCAGATGATCAGTCATTTCTCCTTTTTTGACACTAATTTTGTATCCCTTGGTTTTTTATTACATATTTTTAAAGAATATGACTGGATCTGGAAAGATTTATAGAGTATTTATGATCTCAAACTGTAGTctacctactgactaggagatgGAGTCATACGCAGCTGCAGAATTTGCTGTATAATtacaaacattttattttatggcAACGTAAAATGTTTAATTACCAGCCTATAATCAATCCTTCACTAACATACATTACTGCTACAGTTGTGCTATTATTGTAGCACATTAGCTATGGCAGAGTGTAAAAATGGATTGCTTTACTTCAGATTAGATTGACGTTATTGTGTACATCTTCAAAATGGAGACTACACGTATGGTGGTGACCAGAGGGTGGCAATGTAACTTAACAAATCACTCTTgaaactccctcctctctccccgtctctcaattcaatttcaatataaggtctttattggcatggaaaacatatggttccattgccaaagcaagtgaaatagataaaagtgaagaaaaaatatatataaaaaaaatgaacaGTTAATATTAGACTCACAAAAGTTCAGATGTCATATTATccctatatacagtgttgcaacgatacaaatagttaaagtacaaaagggaaaataaataaatcatatttaCACTGGTGATTTTTCTTCACTGGTTCCCTCCCTGAAAAATATGCTGTTCTCCTTTCTGTAGCTTGATTTTCCAGTGAAACCTGTTTAACAGTGTGGCTTCTATCCCATATCAGCTTGTTATAGGAAAGTGGTTGCAATCATCACTGTAGAAAATTATGAACAATTTAAACGTGAACTGTATGTCTGGCTCAGTCTTTGATATCCTTAAAGTAATTTTTCCTATCTGCTGATAAGTTAAGATAGGGCAATTCCACTCTAGATTGTTCTGGTAGTTCTCACATAAGAACTTCATTGGGAGGAAGGATATTTACAGAGGAATTgccattttaggccctttttagacctATTCACGCCTCCTGCAAGACCCTGTGATCTGTGAactgtacatgatacagacacatcttggtgtcattatactccaTATAGTTTTCCCTCAAATATGGAGTACTgtatgtctagattctgaaatacgataaaggctctatataatacttgatgctttcttgaatttgtattggatttggggactgtgaaaagaccccagGTGGCAAGTCTGGTGGGGTACAGTTAAATTctgacatttacatacacttcggttggagtcattaaaacttgtttttcaaccactccacacatttcttgttaaactatagttttggcaa
>TU309283
ACACAGACTCATGGAGGTCCTGGACAAAGCCAAGGAGTACGTCAGGCATTCGGGCAATTGTGTGGAGCTGAACATGGCGCACTGatCAACAGCTGATCTAGAGTCCTACCACAACCATTTTCTGATGTACGCCAGCCAGCATTCTTCCCTTTCACCACCAGTCTGATGCCAGAACACTGCTGGCAGCACTGGCAGAATGCAGATGGAACCAAGATACCCCCAATACAAGATTTTGAGGAAGTGGTTGGAATCTGGTGGTGGGATGCCAAGGAGAAGAACCCGAAGACCCTAGAAGACTTGGACTCCTACCCCCTAGTCCTCCACCAACAACTGAGGAACTTGTGCAATCACAAGTGAGAAGAGGCCTAGCGTTGGGTGAACTTCTGAGACGATGCAGGAGCTCCAGAAACCTCCTCCAGCTCAGCAACCTTGTGAGAAACCCAGGTAACGACCCACATAAATACAAACCACTTTACACCAAGTACATTACAATCACAGAATTTGAAAGCAGCCGTTTCATTTACTTTTTGCACAACAGAATACTTTGCCCCTCACAGTAACAATTATATTTCTTCTGAATAATCTGTTGGAATACATCTCAAGATTGACAGTAAATGCCCTATTGAATCAAGACCCCTGCTGCTGGACCTCTTTAAAGACCCCTTCTGAATCCTTCACTATCAAGCAACTAGGGCATTGATACTCATTGCACTGCGTGGCCCGCAGGCTCGCTGTGATTTTCCCATTTTCCATTCATAACAATGATACAATTTAAATTCAATGTGTTTAATGCAGGCCTGAATCACTTCATTGAATATATCTACTGTTCCCTGGACGGCAGATAGATGGCAGtatagggcctcccgagtggtctaaggcactgaatcgcagtgctagctgtgcaacTAGAGATtctgagtccaggctctgtcgcagccggccacgaccgggagactcATGGTGCGGAGCACAATTGTCCcaacatcgtccgggttaggggagggtttggctggcagggatgtccttgtcccatcgtgcactagcgactcctgtggcgggccgggtgcagtggacgctgacacggtcgccaggtgtatggggtttcctctgacacattggcacggctggcttccgggttaagtgggcattgtgtcaagaagcagtgtggcttgattgtgttgtgtttcggaggacgcctctcccgagtccgtatgtgaattgcagcgatgagacaagactaactaccaattgcataccacgaaatttgggagaaaaagagtaaaaaaataaaaacgagGGGGAAGAGCTATGAATGAACAACCGGAGAATCAGCCGGAAAATGGCGGTCAAAGAAAAGTtttcaaaaaataaaattaaacatgacaaaaagtatgtttgaatgacactgaggggcagcGTTGTTACAGCTAATGccagtttgcctgaggctgatgctgtgcaggtgtttgtacacatgcatatacacacactctcattcaaatgcaCACATACACGGACACACACTTAAATAGTGCCatatgtaaccaatgtgaaatagctcgctagttagcggtggtgcgcactaacagcatttcaatcggtgatgtcactcgctctgagaccttaaagtagttgttccccttgctcggcttttgtggagcgatgggtaacgatgcttcgagggtggctgttgtcgatgtgtgcagaaggtccctggttcaagcccaggtaggggcgaggagagggacggaagcaatactgtcacacatacatgcactcaaacatattcagttggccttgctgttatgatttttgttgtccttttcaaagggggagaccctctagacccaaactactacagacctatatctatcctaccctgcctttctaaggtcttcgaaagccaagttaacaaacagatcaccgacaattttgaatcccaccgtaccttctccactaggcaatctggtttccgagctggtcatgggtgcacctcagccacgcgcaaggtcctaaacgatatcataaccgccatcgataagagacaatactgtgcagctgtattcatcgacctggccaaggctttcgactctgagaatgtggtgattgacatcggcagactcaacagccttggtttctcaaatgattgcctcgcctggttcaccaactagttctcagagttcaatgtgtcaaatcggagggcctgttgtccagacctctggcagtctctataggggtgccacagggttcaattctcgggccgactcttttctctgtatacatcaatgatgtcgcccttactgctggtgattctctgatccacctctacgcagatgacaccattctgtatacttctggcccttctttggacactgttttaactaacctccagatgagcttaaatgccatacaactctgcttctgtggcctccaactgctcttacatgcaagtaaaactaaatgcatgctcttcatcactactctggacggttctgacttaggtatttgtagttgtccacatattataggtgtctggttagactgtaaactctccttccagactcacattaagcatctccaatccaaaattaaatctagaataggcttcctatttcacaaacaaagcatccttcactcatgctgccaaacatagtcagttttacgagggtatctACCAATCCCTgacactactcagcaaattggatgcagtttatcacagagcagctcacagatcactgcacatagcccatccaactacctcatcccccaaACTGTTATTTTATTAATTTTGCACCCCAGTAGCTCTATATTTGCActctcatcttctgcacatctatcactccagtgtttaattgctacattgtaattattttgccactctggcctatttattgccttacctcccttatcctacctcatttgcacacactgtatatatactttttctattgtattatggacTGCGTGTTTGTCAATtccatttgtaactctgtgtttgtgtcgctctgctttgctttatcttggcacggtcacaattgtaaatgagaacttgttctcaactagcctacctggttaaataaagggggcatataagcagtcAATGAAATCTCTTGCAAAATTGAATGATtatatttctctaaaacaggttatactgtaggctacataAGCACTGCCGAGTCAGAACactaggtgaaattaagaggggtaaatatACCACAtttttagggtgaggcacatgggctactgacatcttactacacaactagtattactttcttagctacagtattgTCAGAGTCTAGGTGATGTGGCTAAggcagagtcaggcgcaggacacagatgAGTAATAATAGCAACTTAATACTTCCTACTAAGACAGCACACTGTCCGACCGATGctaggatgaccagaggagggtgacgtgtgagcccaactGATCAAACGATTGCGGACatcagacggaacgtacagacaccCAACTGGACACTGGTTGGGAATGGGCTCTGTACGTAatgcccgctcaatgtccgcgtccacctcccataccaatggtgccaccaggcaagaagccagaagtatgggagtgggatccgtgGACCGcacctctgtgtcatacagccgggacaatgcgtctgccttagcgttctgggaacatggtctgtaggaaagggtgaaaacaaaacgggtgaaaaacatgacgagggttcagtctcctcgccgcccggatgtactccagattgcggtggtcagtccaaatgaggaaagggtgtttagccccctcaagccaatgcctccacgacttcagagccttgacaacagccaacagctcccgatcacccacatcatagtttcgctctgcCGGGCTGAGTTTCTTCGGGAAAAAAAGCACAagggcggagctttggtggcgtacccaagcgctgagacagcacagctcctatcccagccttggACGAGTCCAACTCTACTATAAATGCCATAGAGGGATcaggatgagccagcacgggaactgaggtaaacagagccttcaggtgaccagAAGCCCTGTCTgccccagctgaccactgcagtTGCACCGGTTTCCCGTTTAGCAAAGAGGTAATGGGAGCTGGGGTGATGATGGGGTTGCTGGAAAACCCCGTCTCTCCCATCGCTCCATGGTTTGCAGATGCTGGACGCGGTCCTCCATAGGTAGAGGAGGGCTGTGtgcacctgctgactccatttgaAAGGTGCGTGTTTCTGTCAGAGTCTGATGTGGGTAAGGCGGAGTCAGGTACAGGACACAGATGAGTAATAATAGTGACTTTACTCAAAAATAATCTTTCAACAAGGAGAAGGAAAATCCAGAATCACATAAACGAGACAACAAAACCATGATGgctccagagggttaaatagggaaataattaAAACGTAATGGGatccaggtgtgtacaatcaagacaaaacaaatggaaaaagaaatgTGGATCGGTGGAGGCTAGAAAGCCGATGACGTCGACCGGCGAACGAACAAGTAGAGGCaacaacttcggcggaagtcgtgacaagaaTACATATCTCCCTAGTAtatacataatttatgcagcagcatacaatacattattgaacttgccttgttgtgctgtgctcacttgaacagcaTGGTGGCACGgcggtcaaatcaaatcaaatgtatttatatagccctttgtacatcagctgatatctcaaagtgctgtacagaaacccagcctaaaaccccaaacagcaagcaatgcaggtgtagaagcacggtggctaggaaaaactccctagaaaggccaaaacctaggaagaaacctagagaggaaccaggctatgtggggtggccagtcctcttctagctgtgccgggtggagattataacagaacatggccaagatgttcaaatgttcataaatgaccagcatggtcaaataataataaggcagaacagttgaaactggagcagcagcacagccagttggactggggacagcaaggagtcatcatgccaggtagtcctgaggcatggtcctagggctcaggtcctccgagagagagaaagaaagagagaattagagagagcatacttaaattcacaaggtgtcaccggataggacaggagaagtactccagatataacaaactgaccctagccccccgacacaaactactgcagcataaatactggaggctgagacaggaggggtcaggagacactgtggccccatccgatgatacccccggacagggccaaacaggaaggatataaccccacccactttgtcaaagcacagcccccacaccactagagggatatcttcaaccaccaacttacaatcctgagacaaggccgagtatagcccataaagatctccgccacggcacaacccaaggggggcgccaacccagacaggaagatcacatcagtgactcaacccactcaagtgatattgtaccccctagctcgattgtccattgtttgtaatctatgtatgctcGTGTTCTCTCAagtgctttatgtattgatttgttgttaataaaaatacattttaaaaaagtaaataattctgtcttacagcctctctccattttgtagcacttctctcactgtttaaaaacaagaaaaggacagggtaagggggatacctagtcatttgtgtCATCACTGCAAGCTATCATGACTCAAAAGCTGCTGTCtacttctgaagatcactttagcacagCCCTAAAAACCCAATTAAAATTTgtcaaaccttcaaataggtatgtacgcattatataaactctttatagtgttttatttacattttagagccAATAAgttgataagttggacagatcgagtgaaaaaagccatttccccacacgacatctctccttctcactatcacgcaataGGTTtagcttccccacccgccatttttaaaaagacccga
>TU309282
AGAGGGAAACTGACACTCAAGTTCTGCCTATATAAGTCTATAAGATCAGCCACCAGCACAAGAAGTGATTGAACACCATCCAGATCTCACCATGTCAGACACGGTCCCCCTGGAACAGAGGTACAAGGCCAGCATGGTCCTGAGTGGAGCAGGAGATGCCCTGGGCTGCAACCATGGTACCTGGGAATTTGAAAATGATGGAGTGTTAATACATGAGCAAGTTCAGAAGAGAGGAGGTCTAGAGAAGCTGGATGCCATAGACTTCCCTGTTAGTGATGACACCGTCATGCACCTGGCTACAGCTGAGGCTCTGGTCAAGgtaggggagggggaaggggcgTCCCTCCCTGTGCTGTATCGAGCCCTGGTGGAGAAGTACATTGTAAGCATGACAGACATGGCTGGAA

Function

NR:

description
protein ADP-ribosylarginine hydrolase-like

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036964942.1 False 2524 mRNA 0.42 4 52704952 52708746
TU309283 False 5945 lncRNA 0.47 4 52693956 52707422
TU309282 True 407 TUCP 0.52 2 52708183 52708816

Neighbor

gene id symbol gene type direction distance location
LOC110520181 adprh coding downstream 12774 52686923 ~ 52692178 (-)
LOC110520175 LOC106586279 coding downstream 629276 51956334 ~ 52075676 (-)
LOC110520176 LOC106586280 coding downstream 862104 51817564 ~ 51844042 (-)
LOC100135875 LOC100135875 coding downstream 970653 51688835 ~ 51734299 (-)
LOC110520172 LOC106586277 coding downstream 1024040 51630789 ~ 51680912 (-)
gtdc1 gtdc1 coding upstream 72035 52780781 ~ 52826389 (-)
zeb2a LOC106586328 coding upstream 119037 52827783 ~ 52875770 (-)
LOC110520193 LOC106586318 coding upstream 675795 53384541 ~ 53394318 (-)
LOC110520195 LOC106586316 coding upstream 828931 53537677 ~ 53562438 (-)
ubxd2 ubxd2 coding upstream 952354 53661100 ~ 53663978 (-)
G271968 NA non-coding downstream 22319 52675119 ~ 52682633 (-)
G271959 NA non-coding downstream 31837 52672693 ~ 52673115 (-)
G271930 NA non-coding downstream 50845 52653877 ~ 52654107 (-)
G271911 NA non-coding downstream 65139 52639494 ~ 52639813 (-)
G271901 LOC100136012 non-coding downstream 69574 52635150 ~ 52635378 (-)
G272408 NA non-coding upstream 61586 52770332 ~ 52770543 (-)
G272412 NA non-coding upstream 64340 52773086 ~ 52773290 (-)
G272384 NA non-coding upstream 66847 52775593 ~ 52776534 (-)
G272417 NA non-coding upstream 80255 52789001 ~ 52789228 (-)
G272445 NA non-coding upstream 169012 52877758 ~ 52878101 (-)
il1rl1 il1rl1 other downstream 1104722 51596933 ~ 51619476 (-)
fgf9 NA other downstream 1230813 51471899 ~ 51478510 (-)
LOC110520160 LOC106586095 other downstream 1575642 51126600 ~ 51130404 (-)
LOC110520139 LOC106586251 other downstream 2262080 50440201 ~ 50442930 (-)
LOC110520121 LOC106581751 other downstream 2803414 49895327 ~ 49901575 (-)
G272713 LOC106586324 other upstream 541180 53249926 ~ 53251084 (-)
G274344 LOC106586294 other upstream 1971172 54679918 ~ 54682805 (-)
LOC110520227 plekhm3 other upstream 2394748 55068639 ~ 55122013 (-)
G275250 NA other upstream 2701397 55410143 ~ 55411487 (-)
si:dkey-91i10.3 LOC106586420 other upstream 4562036 57270782 ~ 57297762 (-)
LOC110520182 NA other upstream 761 52693956 ~ 52708816 (-)

Expression


Co-expression Network