kif5c (LOC106586321)


Basic Information

Item Value
gene id kif5c
gene name LOC106586321
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 53255416 ~ 53288980 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036974574.1
CCAACCCACTAGAGGGGAACGTCGAGTTGAGTGATTAGCTTCCATGGAATATTGGCCCATCCATTCCATTTTACACAGAAATATTTGTTCTTATGGTGATGTTTAAAAATGTAACCTACCCGTGTAACACTTATTTACAACACATGCAAAGTAAAATTCTTTACAATCTCTTGTTTTATATCGTTTATCAATATGATTTGAATACTCCTCCCAGAATACCATAGAAGTCGCGTTCGGGCTGCAAGCGTGTTAGGCTACCGCAACATCAACATCCTCACCATCACTGAGGTGGACCAAAGTGGGATTGACAGCATTAGAGCAAGGAGCTTCAAATTGGTCGATGCTGGTCCTGATGCAAGACGCATCGGTGAATACGGGAAGTCTTTAACCAATGTTTGACCACGAAAAGGGGAACTCACATTCAAATCGACGCTATCAAACGATAGCAGCCAGACCATTCGTCAATCTATTGTTTTCCTTTTAAGCAGGTAACGTTAGACTAGGATTCAGCCTAGCGCCAATCGTTTCATTGACAGGGATGTCGATCGAGATTGAATTTCAGCGAATGACAAAGGAAAGAAGTGCTTAATTCCATCTCAGTAAAATTGCAGTAAACTTCGCGATAGTTAGCCTAGAGAAAGTTATTTGGGTTATCTGGTTGGAAATAACCTAGTGCTGTGGACATGGCGGATGCTGCTGAGTGCGGTGTAAAAGTGATGTGCCGATTTAGGCCTTTGAATGAATCGGAAACCAACAGAGGAGACAAATACATCCCGAAATTCAAAGGCGAAGACACGGTGGTAATAACGGGCAAGCCTTATGTGTTTGATCGAGTCCTGCCACCCAACACAGCCCAGGAGCAGGTCTATGATGCCTGTGCCAAgcagatcgtcaaagATGTGTTGGGTGGGTACAATGGAACCATCTTTGCCTATGGCCAGACCTCATCGGGCAAGACTCACACCATGGAGGGCAAGCTCCATGACTCCCAGCTGATGGGTATCATCCCCCGTATCGCCAGGGACATCTTTGACCACATCTACTCCATGGACGAGAACCTGGAGTTCCACATcaagGTCTCCTATTTTGAAATCTACTTAGACAAGATCAGAGACTTATTGGATGTGTCAAAGACCAACCTAGCAGTGCATGAGGACAAAAACAAGGTGCCCTATGTTAAGGGCTGTACGGAGCGCTTTGTGTCCAGTCCAGAAGAGGTTATGGATGTCATCGATGAAGGAAAATCCAATCGTCACGTGGCTGTTACAAACATGAATGAGCACAGTTCTCGCAGTCACAGCATCTTCCTGATCAACATCAAGCAGGAGAATGTAGAGACAGAACTGAAGCTGTCAGGAAAACTCTACTTGGTGGATCTGGCTGGCAGTGAGAAGGTCAGTAAAACTGGGGCAGAGGGATCTGTGTTGGACGAGGCCAAGAATATCAATAAGTCCCTCTCCGCCCTGGGGAACGTCATATCAGCTCTGGCCGAGGGAACTAAAACCCACGTGCCCTACAGAGACAGTAAGATGACCCGTATCCTGCAAGACTCTCTGGGGGGAAACTGTAGGACCACCATCATCATCTGTGCATCCCCCTCTGTCTACAATGAGGCTGAGACCAAGTCCACCCTCATGTTTGGACAGAGAGCTAAGACCATTAAGAACACAGTGTCAGTGAACCAAGAGCTGACAGCTGAGGAGTGGAAGAAGAAGtatgagaaggagaaagagaagactaAAGGCTTGAAATACGTGATCCAGAAGCTTGAGACCGAGCTCAAACGCTGGAGGAAAGGTGAGGCTGTTCCAGTGGAGGAACAGCTGAGCAGTAAGGAGAAGAAGAGCAACAGTTGTGACGCCATGGCCACGCCCATGATTGACACCATCGCCCCACCCCCTATCCCGCTATTGGACGAGGAGAAGACCCGATACGAGGGGCTCATCACCGACTTGTACCAGCAGCTGGATGACAAGGATGATGAGATCAACCAACACAGTCAGCTGGCAGAGAAGTTCAAAGAGCAGATGATCGATCAAGATGAGCTGCTGGTTTCGGCCCGTAAGGACTATGAGAAGCTGCAGGAGGACCTGTCCAGGCTGCAGAGGGAGAACGAGGCGGCCaaagaggaggtgaaggaggtgCTGCAGGCCCTGGAGGAGCTGGCTGTTAACTACGACCACAAGAGCCAGGAAGTGAAGAACAAGAACCGCTCCAACACCCAGCTCAGTGAGGAACTCAACCACAAGAGCACCACTCTGGAGGGGGTGCAGAGGGAGCTGTCCAGTCTACAGGAGCTCAGCAGTCACCATAAGAAGAGAGCAGCAGAGATCCTCAGTCTACTGCTCCGAGACCTCAGTGAGATAGGAGGCATCATCGGCACCAGTGACCTCAAGTCTaTGATGGAGGTGAATGAGGTCATCGAGGAGGAGTTCACCATGGCCCGTCTTTACATCAGCAAGATGAAGTCGGAGGTCAAGTCTCTGGTGAACCGCAGCAAACAGCTGGAGAGCTCCCTTGTCGACACCTCCCGCAAGATGCAGGCCAATGAGAAGGAGCTGGCCTCCTGTCAGTTACTCATCTCCCAGCACCAGGCTAAGATCAAGTCTCTGACAGACTACATGCAGAACATGGAGCAGAAGAAGAGGCAGCTGGAGGAGAGCCAGGACTCCCTGATGGAAGAGCTACACGCACTACATGCACAGGAGAAAATGAAAGAGGTACATGTGATGGATAAGCAGAAGGAGCACCTGACCAAACTGCAGGATGCAGTGGAGATGAAGAAAACCCTAGAGGAGCAGATGGAGAACCACAGAGAGGTGCATCAGAAGCAGCTGTCTCGCCTGCGGGATGAGATCGACCACAAGCAGAGGGTCCTGGACGAGCTCAAGGATCTGAACCAGGGGCTGCAGCTGGAACAGAGCAAGCTGCGGTCAGACAATGACAAACTGAAGGCCGAGGAGCTGGAGAAGGACGAGCAACTGCAGAAGCTTGTCTTCTTGAATGAGAAGAGAGAGCAGGCCAAGGAGGACCTGAAGGGGCTGGAAGAAACTGTGGCCAAGGAGCTTCAGACCCTGCACAACCTGCGCAGGCTTTTCATCCAAGAGCTCACCTCCCGCGTCAGCATGAGTGCAGAGATGGATAATGAGGAGGCTGGGGGCAGTCTGGCTCAGAGACAGAGGATCACCTTCCTGGAGAACAACCTGGAGCAGCTCACCAAGGTCCACAAACAGttGGTGCGTGATAACGCCGACCTGCGCTGTGAGCTGCCCAAGCTGGAGAAACGTCTGCGGGCTACGGCTGAGAGAGTCAAGGCCTTGGAAACAGCCCTGAGGGAGGCCAAAGAGAGTGCCATGAGGGACCGCAAACGCTACCTGCAGGAGGTGGACCGCATCAAAGAGGCCATGCTCTCCAAGAATGCCTCCAGGAGGGGGCACTCTGCACAAATAGctaAGCCCATCCGTGCAGGACATCAGCAGCAGTCCACATCCACTCCCTCAGCGGGTCATTCCATCCGTGGAGGCTCTATCCGCGGGGGTGGAGGGGTGTCCAGCCCTCACCACCACCGCCACCCGGCCTCTCCATCACCCTAccgccagcagcagcagcagcagcagcagcagcagcagcgcaGCAAATAAAGCACAGCTGCAGGTGGAAGCTGGATTTTCCAGCTGGATGTACAGACCAGATCTCCTCTCCCTTTAGGACCGGACCCCACTCCAGGACTGTCTGGGATATTCTCTTCCCCCATGGAccttgctatctctctctctaaccactgggaccaatcctcctctccttctctcaccacTCTGCCTTTACTGGGACTCCAGACTCCTCATTCCTGAAAAAAACACACTCTGGCTCATATCTTTATTAATAGGTCTCCTATCCTCATGGTCAAGAGGAAAGAGAGGCTCCGTAATGTTGAACAAGTGTTTTTCATCTTTCGCCTTCTTgaatctctctcactctgcctctgttTCTGGTGCTCTATCgatatgcctctctctctctctctctctctctctctctctctctctcgctctctcgctctccctctctctctcagactgaaaTGTGTAATGAGCTCCTTCCTATATGTTGTTGAGGGTGATGTCTCTCTGGTGCTTGTTCAGTGTTGTATCTTGTGAAACAGGCTGGTTTTCCTTGAAGATAAATTATGAGAAAAGGGTGGTTTAGAGGGTAACATTGAATATGgttgtttaggggtttccgtctAACACCAATACCCTCAGAAACAATAGAAGGGACACGGATGTTGTTAA

Function

NR:

description
PREDICTED: kinesin heavy chain isoform 5C-like

GO:

id name namespace
GO:0007018 microtubule-based movement biological_process
GO:0005871 kinesin complex cellular_component
GO:0005874 microtubule cellular_component
GO:0005524 ATP binding molecular_function
GO:0003777 microtubule motor activity molecular_function
GO:0008017 microtubule binding molecular_function

KEGG:

id description
K10396 KIF5; kinesin family member 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036974574.1 True 4292 mRNA 0.51 26 53255416 53288980

Neighbor

gene id symbol gene type direction distance location
LOC110520189 LOC106586324 coding upstream 1923 53235543 ~ 53253493 (+)
LOC110520187 LOC106586325 coding upstream 20389 53174264 ~ 53235027 (+)
acvr2aa LOC106586327 coding upstream 82990 53124656 ~ 53172428 (+)
LOC110520185 NA coding upstream 312643 52874928 ~ 52942773 (+)
LOC110520180 LOC106586330 coding upstream 495040 52708371 ~ 52760376 (+)
LOC110520190 LOC106586322 coding downstream 2304 53291284 ~ 53339392 (+)
LOC110520191 LOC106586320 coding downstream 58676 53347656 ~ 53375674 (+)
LOC110520194 LOC106586317 coding downstream 147048 53436028 ~ 53449882 (+)
LOC110520196 NA coding downstream 311192 53600172 ~ 53629285 (+)
parp14rs3 LOC106586314 coding downstream 342789 53631769 ~ 53646425 (+)
G272308 NA non-coding upstream 38388 53216713 ~ 53217028 (+)
G272290 NA non-coding upstream 69639 53185564 ~ 53185777 (+)
G272283 NA non-coding upstream 82245 53172836 ~ 53173171 (+)
G272258 NA non-coding upstream 135921 53119173 ~ 53119495 (+)
G272257 NA non-coding upstream 137051 53117965 ~ 53118365 (+)
G272837 NA non-coding downstream 90430 53379410 ~ 53379650 (+)
G272867 NA non-coding downstream 134890 53423870 ~ 53478570 (+)
G272982 NA non-coding downstream 297672 53586652 ~ 53586931 (+)
LOC110520169 il1rl1 other upstream 1676733 51573980 ~ 51582567 (+)
G269291 rap2a other upstream 2355139 50898589 ~ 50900277 (+)
LOC110520146 ino80d other upstream 2650600 50601983 ~ 50618761 (+)
G272965 NA other downstream 359845 53648825 ~ 53652431 (+)
G273004 LOC106586313 other downstream 368481 53657461 ~ 53658683 (+)
G273094 LOC106586310 other downstream 552284 53841264 ~ 53841617 (+)
G274592 NA other downstream 1585419 54874399 ~ 54875115 (+)

Expression


Co-expression Network