LOC110520218


Basic Information

Item Value
gene id LOC110520218
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 54633738 ~ 54636478 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002472959.2
CCCCTAACATCTCCTACAGATCAGAGTAACCGCCCCCAACATGtcctacaggtcagagtcacCGCCACTAAcatctcctacaggtcagagtcacCGCCCATAAcatctcctacaggtcagagtcacCGCCCCTGACATCTCTTACAGGTCAGAGTTACCGCCCCTAACATCTCCTGCAGGTCAGAGTCACCGCCCCTAACTTCTCTTACAGGTCAGAGTCACCGCCCCTAACATCTCTTACAGGTCAGAGTCACCGCCCCTAACGTCTCCTACAGGTCTGAGTCACCGCCCCTAACATCTCTTACAGGTCAGAGTCACCGCCCCTAACATCTCCTACAGGTCAGTGCCACCACCCCTAAcatctcctacaggtcagagtcacCGCCCCTAACATCTCTTACAGGTCAGAGTCACAGCCCCTAACATCTCTTACAGGTCAGAGTTACCGCCCCTAACATCTCCTGCAGGTCAGAGTCACCGCCCCTAACATCTCTTACAGGTCAGAGTCACCGCCCCTAACATCTCTTACAGGTCATGGTCACCGCCCCTAACATCTCTTACAGGTCATAGTCACCGCCCCTAAcatctcctacaggtcagagtcacCGCCCCTAACATCTCTTACAGGTCAGAGCCACCGCCCCTAACATCTCTTACAGGTCAGAGTCTCCGCCCCTAACATCTCTTACAGGTCAGAGCCAACcccagagggaagaggagaaaggTGGACTGGACTGGAGGGTCATGTTTTGTTTTGAGTAACACTAACGTGGACTCAAACTCTCTTTACATTACAGTCATAGAATACAAAAGAGCAGAAACAGATCTGAGACTAGGCTAGCAAATATCTTTACAGATCTGAGACTAGGCTAGCAAATATCTTTACAGATCTGAGACTAGGCTAGCAAATATCTTTACAGATCTGAGACTAGGCTAGCAAATATCTTTACAGATCTGAGACTAGGCTAGCAAATATCTTTACAGATCTGAGACTAGGCTAGCAAATATCTTTACATATCTGAGACTAGGCTAGCAAATATCTTTACAGATCTGAGACTAGGCTAGCAAATTATCTTTACAGATCTGAGACTAGGCTAGCAAATAACTTCAGTATAGCCTGTATTATGTAGCCCTGATTTTTATGTCTCTGGTTTCTTTATAAACAGTGTCCGGCTGCTGATCATTGtgtctctcttgtctctgtctgtcagacaGTGTCCGGCTGAAGAGCTGCCCTTCGCAGCTCAGTGGAACTGGTGACGGCCATGACTGCCTGACCGGCCGCAGTTCCTCCAAGGAAGCCCATAGGATCCTGCATCCTAAAGGCCGTCTCTATCCGCTCAACTGTACCATGGACATGGAGATCCATCATGGCGACTGCTACCACACACTCAACAGTCCTCAAGTTTTATGCTGCCCTCCTGCCCTATCGTAACCTCTGTCTGGGCCCCAACTCTGTGGCTCTCTACAAACAGTCCTACAACTCCATCCCCTACACAGAGAAAGAATGacTGTTGGCTGTGATGGAGGTGACCTCCCCAGAGACTGAGGTTGTGGTCGGAGTCAGGTATTTCTACCTGCTAGCCTGCAAGCCAGAGGACTAGCTACAGATGACTGAGACTATGATGTTTCCCCTGTGGAAACTTAAATATTTAGTTAGTGATGAACAATTAAGGAAGTTGTTATTActgttgtcacgtcctgaccatagagagctgtttattctctatgttggttggggcgtgacagTGACTACGGTGGGTTATCGAGGTGATTAATgatttatgttggcctggtatggttcccaatcagaggcagctgtttatcgttgtctctgattggggatcatatttaggcagccattttccccattgtgctttgtgggatcttgactatgtatagttgcctgtgagcactattGTAGCGTCACGTTTTGTTCTTTTATTGTT

Function

NR:

description
YHR209W

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002472959.2 True 1949 mRNA 0.48 3 54633738 54636478

Neighbor

gene id symbol gene type direction distance location
LOC110520216 LOC106586300 coding downstream 9194 54617528 ~ 54624544 (-)
LOC110520213 ube2f coding downstream 39658 54504064 ~ 54594080 (-)
LOC110520212 NA coding downstream 204524 54425558 ~ 54429214 (-)
LOC110520207 LOC106586304 coding downstream 441909 54181672 ~ 54191829 (-)
LOC110520203 LOC106586308 coding downstream 739950 53883698 ~ 53893788 (-)
LOC110520214 LOC106586297 coding upstream 2752 54639230 ~ 54646342 (-)
LOC110520215 LOC106586297 coding upstream 10145 54646623 ~ 54659681 (-)
LOC110520226 LOC106582378 coding upstream 411040 55047518 ~ 55050859 (-)
LOC110520227 plekhm3 coding upstream 435315 55068639 ~ 55122013 (-)
idh1 LOC106586335 coding upstream 494916 55131394 ~ 55146388 (-)
G274412 NA non-coding downstream 26366 54607167 ~ 54607372 (-)
G274208 NA non-coding downstream 315952 54315329 ~ 54317786 (-)
G274198 NA non-coding downstream 344467 54281582 ~ 54289271 (-)
G274126 NA non-coding downstream 404561 54174850 ~ 54229177 (-)
G274339 LOC106586295 non-coding upstream 32884 54669362 ~ 54678112 (-)
G274531 NA non-coding upstream 172341 54808819 ~ 54809081 (-)
G274536 NA non-coding upstream 177824 54814302 ~ 54814543 (-)
G274538 NA non-coding upstream 182790 54819268 ~ 54819476 (-)
G274552 NA non-coding upstream 194127 54830605 ~ 54831374 (-)
G272713 LOC106586324 other downstream 1382654 53249926 ~ 53251084 (-)
LOC110520182 NA other downstream 1924922 52693956 ~ 52708816 (-)
il1rl1 il1rl1 other downstream 3033508 51596933 ~ 51619476 (-)
fgf9 NA other downstream 3159599 51471899 ~ 51478510 (-)
LOC110520160 LOC106586095 other downstream 3504428 51126600 ~ 51130404 (-)
G274344 LOC106586294 other upstream 43440 54679918 ~ 54682805 (-)
G275250 NA other upstream 773665 55410143 ~ 55411487 (-)
si:dkey-91i10.3 LOC106586420 other upstream 2634304 57270782 ~ 57297762 (-)
G277673 LOC106586423 other upstream 2766506 57402984 ~ 57403575 (-)

Expression


Co-expression Network