Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110520218 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 54633738 ~ 54636478 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| YHR209W |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002472959.2 | True | 1949 | mRNA | 0.48 | 3 | 54633738 | 54636478 |
54,631,000
54,632,000
54,633,000
54,634,000
54,635,000
54,636,000
54,637,000
54,638,000
54,639,000
54,640,000
NC_048567.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520216 | LOC106586300 | coding | downstream | 9194 | 54617528 ~ 54624544 (-) |
| LOC110520213 | ube2f | coding | downstream | 39658 | 54504064 ~ 54594080 (-) |
| LOC110520212 | NA | coding | downstream | 204524 | 54425558 ~ 54429214 (-) |
| LOC110520207 | LOC106586304 | coding | downstream | 441909 | 54181672 ~ 54191829 (-) |
| LOC110520203 | LOC106586308 | coding | downstream | 739950 | 53883698 ~ 53893788 (-) |
| LOC110520214 | LOC106586297 | coding | upstream | 2752 | 54639230 ~ 54646342 (-) |
| LOC110520215 | LOC106586297 | coding | upstream | 10145 | 54646623 ~ 54659681 (-) |
| LOC110520226 | LOC106582378 | coding | upstream | 411040 | 55047518 ~ 55050859 (-) |
| LOC110520227 | plekhm3 | coding | upstream | 435315 | 55068639 ~ 55122013 (-) |
| idh1 | LOC106586335 | coding | upstream | 494916 | 55131394 ~ 55146388 (-) |
| G274412 | NA | non-coding | downstream | 26366 | 54607167 ~ 54607372 (-) |
| G274208 | NA | non-coding | downstream | 315952 | 54315329 ~ 54317786 (-) |
| G274198 | NA | non-coding | downstream | 344467 | 54281582 ~ 54289271 (-) |
| G274126 | NA | non-coding | downstream | 404561 | 54174850 ~ 54229177 (-) |
| G274339 | LOC106586295 | non-coding | upstream | 32884 | 54669362 ~ 54678112 (-) |
| G274531 | NA | non-coding | upstream | 172341 | 54808819 ~ 54809081 (-) |
| G274536 | NA | non-coding | upstream | 177824 | 54814302 ~ 54814543 (-) |
| G274538 | NA | non-coding | upstream | 182790 | 54819268 ~ 54819476 (-) |
| G274552 | NA | non-coding | upstream | 194127 | 54830605 ~ 54831374 (-) |
| G272713 | LOC106586324 | other | downstream | 1382654 | 53249926 ~ 53251084 (-) |
| LOC110520182 | NA | other | downstream | 1924922 | 52693956 ~ 52708816 (-) |
| il1rl1 | il1rl1 | other | downstream | 3033508 | 51596933 ~ 51619476 (-) |
| fgf9 | NA | other | downstream | 3159599 | 51471899 ~ 51478510 (-) |
| LOC110520160 | LOC106586095 | other | downstream | 3504428 | 51126600 ~ 51130404 (-) |
| G274344 | LOC106586294 | other | upstream | 43440 | 54679918 ~ 54682805 (-) |
| G275250 | NA | other | upstream | 773665 | 55410143 ~ 55411487 (-) |
| si:dkey-91i10.3 | LOC106586420 | other | upstream | 2634304 | 57270782 ~ 57297762 (-) |
| G277673 | LOC106586423 | other | upstream | 2766506 | 57402984 ~ 57403575 (-) |
