LOC110520223 (klf7)


Basic Information

Item Value
gene id LOC110520223
gene name klf7
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 54859520 ~ 54931543 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021597385.2
CACTAGACAGCTAGCCCGAGCTAGTCGCCTGCTGAAGCCACGGCAGCCAGGGGAAAAGCAACCTGGAATTTATAGAGCGAAGATTGCAATCTGGTAATGCGGAAATAGATGGACGTTTCAAGTCACCGAGTTGGCATCCCACTCCTGGACTGAAGACCTGATAGTTAGCACCAGAGAAAAAGGATTGCAATTCAGTGACACAGTATTCAACTATTATTTTTATATTTCTTTATAGTGGTTATTGTGCGTATTATTTGGTTCCAGTGGCATATAGAGCTATACTTTCTGGTGCACGGACAGACGCACGAGGAGTATCTgaataacattttttttgttaaccCCTTAGACCTACCATACACAAGTAGGgttcttttttttctccagtgGATCAAAGTAAATTGTTTTCAAATCGCGCATCAACATGGACGTGTTGGCGAATTACAGTATTTTTCAGGAACTCCAACTCGTGCATGATACTGGCTATTTCTCTGCGATGCCTTCGCTGGAGGAGAACTGGCAGCAGACGTGTCTGGAGTTGGAGCGGTACCTGCAGACAGAACCCAAGCGTCTATCAGAGCTGTTTGACGAGGAGCTCGACTGTCTCCTGACGCCCACCTTCATGCAGGGTGCTGACAGTGACGAGGACCTGATGGACCCCCTCCTCCCCAGCCTCCCCgaccagcccagcccccctcccctcctcgtcTCCCTTCCCAAGGTGTTACAGGCCCCACAGCCCCACAACACCAAGGCCTCCGGAAAAGAGTCTGGAGCGAAGACCACCAAGGAGGGGGTCAACGGGGTCAACGCTGCTCAGCTGAGTGCCGTCACCTCCCTCACACCACCCTCCTCGCCTGAGCTGGGCCGCCACCTGGTCAAGCCCATGCAGACGCTCACCGCCACGGCCGACGGCACGCTCACTCTCAAACTGGTGGCCAAGAAGGTTGGTCTGAATGCGGCCAAGCTGGTGGCCACACACTCCACTCTACCCTCGCCGCCCAGCAGGGGGGGGCACAGTGACAGCGAGCAGGGGGCTGGGTCGCTGGGGGGAGATATCCCAGAGAACAAGAAGAGGGTCCATCGCTGTCAGTTCAACGGCTGCAGGAAGGTTTACACCAAGAGTTCCCACCTGAAGGCAcaccagaggacacacacagGTGAGAAACCGTACAAGTGCTCCTGGGAGGGCTGTGAGTGGCGTTTCGCCCGGAGCGACGAGCTGACGAGGCACTACCGCAAACACACCGGGGCCAAGCCCTTCAAGTGTACCCACTGCGACAGGTGTTTCTCCAGGTCAGACCACTTGGCCCTGCACATGAAGAGGCACATCTaagggagcaggaggaggattgtgaggaagaagagagggagaaggagagatagaaggagagaatAAGTAAGCAGGATGGAAGACGGCCCACACAGCAGCTTCGGCTCTCACCATCCAGAGGCTGACCCTGCCCTCAGAGACCCACCTAAGACCTGACACCAGGAGCAAAGCACTATGGGAGATGACACGCTGGATAGACGGACGCCACGACTCCAGACAGACGGCTGGTCGGCGAGGacggatggagtgatggagtgatggagtgaaaGAGTCGAGGAGCagcttgtttttttatttacacTTCCATGATTCACACTTCTACTCAACAGTCTACAACCAATTCTCTTTCATCGTGTCATCCGATTAGCCATGCCTTGTCCAATCAGGGTTGGGAACTCACACACTGCCAAACCAATCCGCTGATCCAGTTACGACCCATTTACAATCCAATGTTTCTTTTCTGTACATTTAAACTATGGAGCAACTTGGGAAAGGAAATGGTTCACCCAGAATTATGAACTGCTTTCCTTTGACACGCCAAACGTCCGTGACTTGCAGAAGTAACAATGGGCCACACAAACCAACAATAACTATTGGCCATTTTATTCTGGTGTGCTGTTTCCCAACCCCATCCCAATTTGTGTCTCTTGTATAGGAACCCACAAACTGCAGCTATATGTCAACCCTCAGCAAGCTATACCGTGTGAAATAACAACAATGCCAAAATAGCGAGACGAGGGAGACCAATGGAACTAGTGGGCAATCCGCCAGTGGCGCCGCCTGTCTGTGGGAGTAGGGTCTGACACTTCCAGAGAGTGAGCTCTGTGACCCACAGGCACCTTGCTGTGGATCTCTCAGGCTCTCCTGTAGGAGGCGCTCTGCTCTTCTCGCTCAGCTTCACTCCTGCCACCTCACAGGCAACAACTAACAAATGCGCAGCGACACTTTCTTGCCTTTGTTTTTTAAAGACAAttaattattactattattattaagaATGATGGTCTGTTTTCTTTCAGCTGAAATTTCTTAAAAATTCACTgaatgaaaaaaaacaaaaacattttaagtACAAACGAGAAAGAATGTGCACATATGGCAGGAAGGGAGGAACATCGAACGAACGCACCCCGGCCCGTAAACACAGGCTAAACTCAGTACCTGCTATTTAGCACTGACAGTTaaggagataaaaaaaaataaaaaagaaatcACAAGAAACTCTGAAAGAAAAAGGATTTGTATTGTTGGCCTGAAATGAAAGAGAAGGACCTCTGTTTTCCACTCTGTGTTTCTCCTGTGTGATACTAAAAGCAAACCTTGGCGTGACCTTCGAGGCATCAGCACCAAACCAGGGccaaaacacaacataaaacTGGAAATGGTATTTTTGCTTTGTTTGTGTGGATTCTGGAAATACACCTTGGAACCCCCTACCTCCTCCAGTATGGCGGGGGAGGGGCCTGGGAGGCTGGTCTGCTGTGACCACACACCCTATTTGGGAGACTAGGAACTTGATAGGCTACTGAACATGAACCTGGGACTAAAGACACCCAACTCTCTGGGTAGTAGAAAGGACAACATGGCCTCATCAGCCCAGAGAGACTTGCCTGTTTCGTATCCATTGTCTGCACTGACTTTTTCAATGTTATCTGTGCTTTTTTTTCATAAAGTAtacaacaaaaactgaaaaaaagaATACAAAGGAGAAAAAAAACCTGCATAAAAATactgaataaaaaatgtaaaaatctgtctctcacacactcacaccatacagacacaaatacaacgACACACAGAACAGTTTCTTTGCTCATGGCTCCACTTTGAGATAAGACTCAAATAATGATTTAGTTCATGAACAGAGTTGGAAAACGAAACACTGCATGGcagcctctcacacacactcagatcGCTTCCCGGAATTATTTGTTCTGCTCCAAATTTTTCTCTGTAAGATTTTTTTGCAATTGTTGTTTTGTAAAAGACTATCTTATTCCGCTGGAGGTAATGGCTTTGAAATGAGAAATCAAGCTTGTTCTCATGTTCAATCAATCACCACAAATCAGGCCTAGGTCTCTCAGTCTCTGTATGTTAACAATCAGCTTCTACACCATGGGACCAGATTCCTCACCTGTATGCCCCGGATCTATGAAGTCCTACATAGCCTTGCAATCAGGGCATTAATACCAACACCACTATCACTAATACTGTCACTATTACTGTACCACTTCCTTCCCCTCTCGCATACACACCCACTCTGGCCTCCTCACACCAATTGTAATGGCTGCTTTATCAGAGAAGATGCCattactgtctctatagtaacgTTCATGTATCAGCCATGCCAGAATCTCGCAGACGATCCCAGAGCTGCCCTCAGGTGGGCCGGTGGAGCTCCGAACAATCAATACCAAAAACGTCCAGCATGGAACTACCCTGGAGCCAGGCAGGGTCTGGAACAGAACACACCGGTATCTGGGAAGTGGACCGCCTCCACACCAGACCTATTGGCACCACTGGCGCAGCAACAGCTCTTTctctacaaacacaaacacagtgtctCGGCAACAAAAAGACGAAGTGAAACAAGAGATTAAGATGATCTTTGTGTTTTGCGTCCACTTTTTAGTTGGAACTTCTTtcttcttgttttgttttgttttaacgCTACAGTGATTATTTTTTTATTGCCATGGTGGATGATGCAAGGTAATGCCAAAATTAGAGAAATGCAGGGGGATTTGTTTCTATTacgcccccaccccccctccccctccccttcaaCGTACAATCATATGGGGTTTTTTTGTGGCACTTTTTGCCGGAATTGCAatggtatgtctgtgtgtgtcccaaTGCGAGCTATAGCACGGCACATCCTTAGGGTACATTGTGAATCTAATCTGCATTGTGAGAAAGAATACTACTACCAGTAGACTGGTTTGAAACTAACAGTGTGGGAGACTGggattgtactgtatgttggttgaTTCATTCACTTTAGGGGAGCTTATAATCTGTCTAATTTTAGCTGACAATAATGTATTTGTTTTAGTTTTGTTTCTGACATTTTATTTTCTTTACGAACCACACAAATCACATTCATTTGGGTTCATAGAGCTGAATGATGtaaaaacaaacactcaaactcaaAAAACCATACACCATGCACTTCACTGGCACTTCAAATAGGTTCAAAAACATGAAAACTCTTCAAGCACTCTTATGTTCTAGTAGACGTTCACTTCTGGTTGTAGCCGTTTCTACGGCTTCCACTGCAGCAAAGCCTGCTGGGTAACAGAAAATGGATACTATGGTCATGGTAATTTAGCCCGTAACAGGCCTGCATGCTAAAAAGATAGCAGCACACAGTTTAAATCCAAATTAGCCCAATTTTAGTCCTCTTGCGTACACACTGACAGGTCTAAAACCTCACTTCAAATGAAAAGTCCTATTCTATTTCAGTCCTGTGGCATTCTCACCAGAAGAAGCTAGCTAggcccctttccctttccctcgcCTGTTAAAACACTGCTTGCTGTCATGGAGATGCTCCTCTGTATAGTTTCCTGGCCACTAGTATCCCACAGCTCTGATTAGCATTAGCGCAGCAGGCTACTCTGTGGAGGCTCCTCTAGTCTCTCCAGTCGCACTCCACTAATGAGAAAGGCTTTTGGTCACAGGGAAACAGATCTGGGGGAAAAAACATCAGGGACCGCGAGCCAAAATGGTTTCATTTCAACGGTCCACAGTACTGTTATGAAACCAGTGTGGAATCTGCCACAGAACAAACAAGAGTACATTAGCAGCAGTTTATCGTAAAGCCAGAGAGATATATATTTATTTGAGAAAGTGATCGAAATTGAAGAGATATTTTTTGacaaagagaaaaaaaatgtttaccccaGGGATTAACCAAATGATGATGAAATTAGCCGTGCTTTTTATCTCATGGATTAGCGATTAAAATGAGATTATGATTAATCCTACAGGCCCTTATAGCTATTTACAACACAACCCCCCACTCCCCCTCCTTCTGCACTCTACAAGTGCCATTCTAATAgccctttatccctctctccatctctccctctctctataaccccACAGAAGCGATCCATGCACAACCAACTGCAGGAACGCTGAACGCACACGTATACACTTTCACCCAAAGATTTGCAGATTCACAAGTAAACTGCTGTGaatgaaaatagagagagagtaagagagagagagagcgagagaaagaaagaatgaactCGTTTTACTGTCCAGTACTATTCCACCATTATTCCCCCCCTTCCACAACCCTGACCCAACCCTGACCCAACTTCTTCCTGCATTACAATCTCTTGTCTGGTGTTCAGTGTGGCCGAACTCATGGTCCATTCATGGTTGTAAAATATGGTTGTGTAGTCTCTTTAGGGTGCCCAATTCAAGGGTGACTTAACTAGCAGCCTACCAATTCTAATGTAGACTTAGTTCAATTAGCTTCTTAGTACAGTGCAACATAGTACAGTGGAGTGTAATATTTCAAACTGTCATGTCTGAGGTGGACCGTCGAGTCTCTGTTAGGTTAACTGTTGCCTGCGAAAACCATCCCAAGAACGATTGCATCATACACCTACCTACCTTAAGCATTCCCGAAACTTGAAGCCTCACACGTTCGGTCCCCATGAGGTAGGGTTGTCACTTTGGTGAGGCTTCTGGCAGCTTTGTAGATAGATACATTAGTAGCTCTTCAACTCAATGAGCTCGTATGGGTAGTGACTGGTTTACAGTGGGTCTGATAACAGTTCTGTA

Function

symbol description
klf7 Enables DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in several processes, including negative regulation of adipose tissue development; negative regulation of insulin secretion involved in cellular response to glucose stimulus; and regulation of transcription by RNA polymerase II. Located in cytosol and nucleoplasm.

NR:

description
Krueppel-like factor 7

GO:

id name namespace
GO:0021634 optic nerve formation biological_process
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K09207 KLF6_7; krueppel-like factor 6/7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021597385.2 True 6139 mRNA 0.46 4 54859520 54931543

Neighbor

gene id symbol gene type direction distance location
LOC110520222 LOC106586294 coding upstream 170022 54673232 ~ 54689498 (+)
LOC110520220 LOC106586295 coding upstream 187121 54668850 ~ 54672399 (+)
LOC110520210 LOC106586303 coding upstream 422159 54365929 ~ 54437361 (+)
LOC110520209 e41l5 coding upstream 494123 54318683 ~ 54365397 (+)
LOC110520208 LOC106586301 coding upstream 541691 54208875 ~ 54317829 (+)
creb1b creb1 coding downstream 61901 54993444 ~ 55001733 (+)
LOC110520225 LOC106586338 coding downstream 90187 55021730 ~ 55045043 (+)
kcnh3 LOC103481844 coding downstream 225900 55157443 ~ 55355650 (+)
LOC110520231 dbr1 coding downstream 440216 55371759 ~ 55375526 (+)
lcmt2 NA coding downstream 449128 55380671 ~ 55388722 (+)
G274525 NA non-coding upstream 62025 54797278 ~ 54797495 (+)
G274459 NA non-coding upstream 71193 54734298 ~ 54788327 (+)
G274458 NA non-coding upstream 125836 54733369 ~ 54733684 (+)
G274449 NA non-coding upstream 132510 54726797 ~ 54727010 (+)
G274714 NA non-coding downstream 185705 55117248 ~ 55117567 (+)
G274715 NA non-coding downstream 187766 55119309 ~ 55119856 (+)
G274720 NA non-coding downstream 194658 55126201 ~ 55126515 (+)
G274723 LOC106582376 non-coding downstream 203908 55135451 ~ 55146403 (+)
G273094 LOC106586310 other upstream 1017903 53841264 ~ 53841617 (+)
G273004 LOC106586313 other upstream 1200837 53657461 ~ 53658683 (+)
G272965 NA other upstream 1207089 53648825 ~ 53652431 (+)
LOC110520190 LOC106586322 other upstream 1522994 53291284 ~ 53339392 (+)
LOC110520187 LOC106586325 other upstream 1636255 53174264 ~ 53235027 (+)
G275542 LOC106586374 other downstream 968651 55900194 ~ 55900743 (+)
G275553 LOC107595854 other downstream 983786 55915329 ~ 55916133 (+)
G277296 NA other downstream 2333024 57264567 ~ 57264892 (+)
G277973 NA other downstream 2858191 57789734 ~ 57790332 (+)

Expression


Co-expression Network