Gene
RNA
| Item | Value |
|---|---|
| gene id | lcmt2 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 55380671 ~ 55388722 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: LOW QUALITY PROTEIN: tRNA wybutosine-synthesizing protein 4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036964963.1 | True | 1074 | mRNA | 0.53 | 11 | 55380671 | 55388722 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520231 | dbr1 | coding | upstream | 5813 | 55371759 ~ 55375526 (+) |
| kcnh3 | LOC103481844 | coding | upstream | 25021 | 55157443 ~ 55355650 (+) |
| LOC110520225 | LOC106586338 | coding | upstream | 335628 | 55021730 ~ 55045043 (+) |
| creb1b | creb1 | coding | upstream | 378938 | 54993444 ~ 55001733 (+) |
| LOC110520223 | klf7 | coding | upstream | 449128 | 54859520 ~ 54931543 (+) |
| LOC110520234 | LOC106586346 | coding | downstream | 17149 | 55405871 ~ 55411555 (+) |
| LOC110504295 | LOC106586344 | coding | downstream | 41471 | 55430193 ~ 55496588 (+) |
| rftn2 | rftn2 | coding | downstream | 352975 | 55741697 ~ 55779314 (+) |
| LOC110520236 | LOC106586369 | coding | downstream | 403637 | 55792359 ~ 55800630 (+) |
| LOC110520240 | LOC106586372 | coding | downstream | 445021 | 55833743 ~ 55849324 (+) |
| G274876 | NA | non-coding | upstream | 1677 | 55375913 ~ 55378994 (+) |
| G274828 | NA | non-coding | upstream | 22978 | 55356782 ~ 55357693 (+) |
| G274865 | NA | non-coding | upstream | 32530 | 55347885 ~ 55348141 (+) |
| G274892 | NA | non-coding | downstream | 9168 | 55397890 ~ 55398203 (+) |
| G274895 | NA | non-coding | downstream | 25379 | 55414101 ~ 55414384 (+) |
| G274913 | NA | non-coding | downstream | 51020 | 55439742 ~ 55440949 (+) |
| G274914 | NA | non-coding | downstream | 54867 | 55443589 ~ 55444242 (+) |
| G274916 | NA | non-coding | downstream | 58185 | 55446907 ~ 55447994 (+) |
| G274592 | NA | other | upstream | 505556 | 54874399 ~ 54875115 (+) |
| G273094 | LOC106586310 | other | upstream | 1539054 | 53841264 ~ 53841617 (+) |
| G273004 | LOC106586313 | other | upstream | 1721988 | 53657461 ~ 53658683 (+) |
| G272965 | NA | other | upstream | 1728240 | 53648825 ~ 53652431 (+) |
| G275542 | LOC106586374 | other | downstream | 511472 | 55900194 ~ 55900743 (+) |
| G275553 | LOC107595854 | other | downstream | 526607 | 55915329 ~ 55916133 (+) |
| G277296 | NA | other | downstream | 1875845 | 57264567 ~ 57264892 (+) |
| G277973 | NA | other | downstream | 2401012 | 57789734 ~ 57790332 (+) |
| G280315 | NA | other | downstream | 4663994 | 60052716 ~ 60054417 (+) |
