LOC110520240 (LOC106586372)


Basic Information

Item Value
gene id LOC110520240
gene name LOC106586372
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 55833743 ~ 55849324 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021597413.2
CCAGGACCACTGAGCTAAAGATTTGTACAactctcattgttctatctgtgactAGGATTTATCAATTTTTTGCTGAACGGATATGAATTAGTTCGGACTTCCGGTTTCAGTCTTACCGAACCACCAAAATGGCGAAAGTCGCCAAAACACACGAAGaCATTGAGGCCCAGATCCTGGAGATCCAGGGTATGAAGGCTGCCCTGGTGGAGGAGGGAGCAGATCAGGGTGTGGGCCTGGACTCAACTGGATATTACGACCAGGAGATCTATGGTGGCAGTGACAGCCGCTTCGCTGGATATGTCACCTCCATTGCTGCCAATGAACAGGAGGATGATGACGAGGAGGACTCTTCAACAAGTCTACTTGGACAGAAGAAACCGGGGTATCATGCTCCGGTGGCTATACTCAATGCGATACCACAGTCAGATGAACAGtacgACCCGTTCGCCGAGCACAGGCCCGCCAAGATTGCAGAGCGTGAGGACGAGTACAAGGCCAGACGACGACAGATGATCATCTCTCCGGAGCGACTCGACCCCTTTGCAGACGCAGTACTGCTTTGCCAGTCCTGTACTGCACTCTCTTAAGGGTGCAGCAACTCATCCTGTGTAGGTTATGGTGAACAGACAGAAGCGTGTGCTTGTCAGTTTTGTCAGGGTCCGCTGGTGGTCTGTCTGGGTGGGGGGCAGCTCTTACTCAATAAACCTCTACCATAAGAACCTTTTTAATTTTGTCTTCTACCCTAGACTTTATATCATTAcatttaaattacatttaaatttCATGGTAGTCTTTTGCTTTAGATTGATTTTGTAATTCGTAATGAATTTaaagaatatatatttttctaaaaaGGAAGCCAAGATCTACGTTTACGAAGTTGAAATAGTAATCGACTGATGTCAAACTACCAGCTGCTTAGTAGCAGGcagcctgtcccccccccccccctcctggaACTAATCGTAGCCTTCACGGCCCCTGATGTAAACGTGTAACTACATATAGATGCTCTCCCTACCCTGGGTTACATAAAGTAGCTACACATTTATCTCACAAGAAGATTCCTAGATTTGGGAACAATTTAGATTTTAATTTTATTAATCAATACTTCACAATCTAGAGGGTATTTTAcatattttcatttatttaagGTTTGAGCCCCAGGAGGATTTTTCTTTTGAGTGACGTAAAAAGAAATCACAGGTGGTATGCTTATGTGTGTGAGTTCCAACCCTTTTCCAAAGTGTTACTAATGGTAAAGAGACATTTTCTAGGCTTCTTTTCTGCCGGTTGAAGTCTGACTGCAGAAGGACCCTTGGCACTGAAAGTGTACGTATTCTGGAGAGCACAGCCCAGGACCCCTGCATCAGTGATGGCTTTATCCTCGCCTGTTATCTCcttaaaagaaagaaaaaacccACCTCAGCTCTTTCTCAATGTATCTGCCTGTTGttttttattcagctatgtttgTATGTAACGCAAGCAAGAGAGGACTGCCTGTATGTTGTGTATCTAGGGTTGTCTTGTTGTGATTCAGCTTAAGGAACTAATACAGTAAAAGTTTCTAAAGAAGTGAGGGCCTAGCTGAGCTGGCTGTGTTTTACTTGCTGTGTTTTATGAATCCGGGTCCTGGGGCGTGTTCTAATCGGCTGCCCTGTGTCTTGTTGGTGCTCTCTCGCGCAGGGGGCAAAACGCCGGACCCAAAGCTGCAGTCCAGGTCGTACATGGATGTCATGAAGGAGCAGCACCTGACCAAAGAGGAG
>XM_021597411.2
CAGGACCACTGAGCTAAAGATTTGTACAactctcattgttctatctgtgactAGGATTTATCAATTTTTTGCTGAACGGATATGAATTAGTTCGGACTTCCGGTTTCAGTCTTACCGAACCACCAAAATGGCGAAAGTCGCCAAAACACACGAAGaCATTGAGGCCCAGATCCTGGAGATCCAGGGTATGAAGGCTGCCCTGGTGGAGGAGGGAGCAGATCAGGGTGTGGGCCTGGACTCAACTGGATATTACGACCAGGAGATCTATGGTGGCAGTGACAGCCGCTTCGCTGGATATGTCACCTCCATTGCTGCCAATGAACAGGAGGATGATGACGAGGAGGACTCTTCAACAAGTCTACTTGGACAGAAGAAACCGGGGTATCATGCTCCGGTGGCTATACTCAATGCGATACCACAGTCAGATGAACAGtacgACCCGTTCGCCGAGCACAGGCCCGCCAAGATTGCAGAGCGTGAGGACGAGTACAAGGCCAGACGACGACAGATGATCATCTCTCCGGAGCGACTCGACCCCTTTGCAGACGGGGGCAAAACGCCGGACCCAAAGCTGCAGTCCAGGTCGTACATGGATGTCATGAAGGAGCAGCACCTGACCAAAGAGGAGAAAGAGATCCGTCAGCAGATGGCAGAAAAGGCCAAGACGGGAGACCTGAAGGCTGTCAACGGCTCTGCTGCCTCCCAGGCTGCCGCTGCCGCCGCCAAGCGCAAACGTCGCTGGGACCAGACGGCCGAGAAACAGGACCAATCAGGAACCCCCAGCAACACCGGCACACCCAAGAAGATGTCTAGCTGGGACCAGGCTGACCTGTCTGCTGAGACCCCAGGACACACCCCTGGCCACACCCCCTCCAACAGCCGCTGGGACGAGACCCCTGGCAGGAATAAGGGCAGCGAGACCCCAGGGGCCACTCCCAGCTCCCGGATGTGGGACCCAACCCCCAGCCACACCCCGGCCGGAGCAGCCACCCCAGGCAGGGGGGACACACCGGGACACACCACCCCCGGACATGGGGGAGCCACAGGCAGCGTGCGCAAAAACCGTTGGGATGAGACCCCCAAGACTGAGAGGGAGACCCCTGGTCATGGTAGTGGTTGGGCTGAGACTCCCCGTACAGACAGAGGAGACGAGTCTGTGGGAGAGACCCCCACCCCCGGGGCCAGTAAGAGGAAGTCCCGTTGGGACGAGACCCCTGCCAGCCAGATGGGCTCTTCCACTCCACTGATGACCCCTGGGAAGACCCCCATTGGAACCCCTGCCATGAATATGGCCACTCCCTCTCCAGGTCACCTGATGAGCATGACCCCAGAGCAGCTGCAGGCGTGGCGTTGGGAGAGGGAGATCGATGAGAGAAACCGACCTCTCACAGACGATGAGCTGGACGCCATGTTCCCAGAGGGATACAAGGTCCTTCCCCCACCAGCAGGCTATGTGCCCATCCGTACCCCGGCCCGGAAGCTGTCTGCCACACCCACCCCCATGGGGGGCATGACGGGCTTCCACATGCAGCAGGAGGACCGCTCCATGAAGCAGATCAACGACCAGCCCAGTGGGAACCTGCCCTTCCTCAAACCAGACGACATCCAGTACTTTGATAAACTGCTGGTTGAGGTAGATGAGTCCACTCTGAGCCCAGAGGAACAGAAGGAGCGTAAGATCATGAAACTGCTGCTGAAGATCAAGAACGGAACACCTCCCATGAGAAAGGCTGCCCTGCGTCAGATCACAGACAAGGCGAGGGAGTTTGGAGCAGGGCCCCTGTTCAACCAGATCCTGCCCCTGCTCATGTCTCCTACTCTGGAGGACCAGGAGCGTCACCTACTGGTCAAGGTCATTGACCGCATCCTCTACAAGCTGGACGATCTCGTCCGCCCATACGTACACAagATCCTGGTGGTGATTGAGCCCCTGCTGATTGATGAAGATTACTACGCCCGAGTGGAGGGCAGAGAGATCATCTCTAACTTGGCCAAGGCTGCCGGCCTGGCCACTATGATCTCCACCATGAGGCCTGATATTGACAACATGGACGAgtatgtcagaaatacaacagcCAGAGCTTTCGCTGTCGTAGCGTCCGCTCTGGGTATCCCATCCCTGCTGCCCTTCCTCAAGGCTGTGTGTAAGAGCAAGAAGTCATGGCAGGCCCGCCACACGGGCATCAAGATTGTCCAGCAGATCGCCATCCTCATGGGTTGTGCCATCCTGCCCCATCTGAGGAGTCTGGTGGAGATCATCGAGCATGGTCTGGTGGATGAGCAGCAGAAGGTGCGGACCATCAGTGCCCTTGCCATTGCTGCCCTGGCGGAGGCTGCCACTCCCTACGGTATCGAGTCCTTTGACTCCGTACTCAAACCCCTATGGAAGGGTATCAGACAGCACAGAGGAAAGGGTCTGGCTGCGTTCCTGAAGGCCATTGGCTACCTGATCCCTCTAATGGATGCTGAGTATGCTAACTACTACACCAGAGAGGTCATGCTGATCCTCATCAGAGAGTTCCAGTCCCCTGACGAGGAGATGAAGAAGATCGTGCTCAAGGTGGTGAAACAGTGCTGTGGTACTGACGGTGTGGAGGCCAACTACATCAAGACAGAGATCCTGCCCCCCTTCTTCAAGCACTTCTGGCAGCACAGGATGGCCCTGGACAGACGCAACTACAGACAGctGGTGGACACCACAGTAGAGCTGGCCAACAAGGTGGGAGCAGCAGAGATCATCTCTCGTATAGTAGATGACCTGAAGGACGAGGCAGAGCAGTACAGGAAGATGGTGATGGAGACCATAGAGAAGATCATGGGGAACCTGGGAGCTGCTGACATCGACCACAAGCTGGAGGAGCAGCTGATCGACGGCATCCTGTACGCCTTCCAGGAACAGACCACTGAGGACTCTGTAATGCTGAACGGGTTTGGCACGGTGGTGAATGCCCTGGGGAAGAGGGTGAAGCCCTACCTGCCTCAGATCTGTGGTACGGTACTGTGGCGTCTCAACAACAAGTCTGCCAAGGTCCGCCAGCAGGCAGCTGACCTCATCTCTCGTACCGCCGTGGTCATGAAGACCTGCCAGGAGGAGAAGCTGATGGGTCACCTGGGAGTGGTGTTATATGAGTACCTAGGAGAGGAGTATCCTGAAGTACTGGGAAGCATCCTCGGTGCTCTCAAGGCCATCGTCAACGTCATCGGCATGCATAAGATGACTCCACCAATCAAAGACCTGCTGCCGCGCCTGACGCCAATCTTGAAGAACAGACATGAGAAGGTGCAGGAGAACTGTATTGACCTGGTGGGCAGGATTGCTGACAGGGGTGCTGAGTACGTGTCGGCCAGGGAGTGGATGCGGATCTGTTTTGAGCTGCTGGAGCTCCTCAAGGCCCACAAGAAGGCCATCCGCAGAGCCACTGTCAACACCTTTGGATACATCGCCAAGGCTATCGGaccCCATGACGTGCTGGCCACACTACTAAACAACCTGAAGGTTCAGGAGCGTCAGAACAGAGTGTGTACCACTGTAGCCATCGCCATCGTGGCTGAGACCTGTTCTCCCTTCACCGTGCTCCCCGCGCTCATGAATGAGTACCGCGTGCCAGAGCTCAACGTGCAGAACGGCGTGCTCAAGTCCCTCTCCTTCCTGTTTGAGTACATTGGGGAGATGGGCAAGGACTACATTTACGCTGTCACGCCCCTGCTGGAGGATGCACTGATGGACAGAGACTTggtccacagacagacagccagtgcCGTGGTGCAGCACATGTCCCTGGGCGTCTACGGCTTCGGCTGTGAAGACTCGCTCAACCACCTGCTCAACTATGTGTGGCCCAACGTGTTTGAGACGTCGCCCCACGTCATCCAGGCTGTGATGGGGGCCTTGGAAGGCCTCAGGGTGGCCATCGGCCCCTGCCGCATGCTGCAGTATTGCCTACAGGGTCTGTTCCACCCAGCCAGGAAGGTGCGAGACGTCTACTGGAAGATCTACAACTCTATCTACATCGGCTCCCAGGATGCTCTCATTGCTCATTACCCACACGTCTACAACGATGAGAAGAACCCTTACCTCCGCTATGAGCTGGAGTACTTCTTGTGATTCTGCTCTTCTCACTCTGAcgatttctctccctcttctctttgtCCTATCTCTCTTTGTGTATAGGACTTGGtccattttttatattatttatctCCTCTGTCTTTGTAGTGGTTGTATCCAACACAGCCACAGTGGCTGTGGCCTGAGATTGATTTTTAATACAATAAAAACTGTGTATGATAGGGAAATGGAGTATAAAATGGAACAACTTCTTAGAGCTTGTAtgtattgttttgttttctcCTTTTTCTAATCATTTCTATAAGGAatgacagacagtacagtagatgGAGTGCAGGCTCTAAGTTAGCCTTGTTATGGAATGGAAAAGCAACTCAGTGAAACTCTTTAAAATATTGTCATGGTTTCTTTTTACCGGCCTTGACCATTCCTTCTCAATGCTTTGCTCGCTTATCAGTGATCACCCCCCTGTTCTTATCAGAATGTTGCTTTATTTGACTGAATAAACGTTTGTGTATAAAATAAAA
>XM_021597410.2
AGGACCACTGAGCTAAAGATTTGTACAactctcattgttctatctgtgactAGGATTTATCAATTTTTTGCTGAACGGATATGAATTAGTTCGGACTTCCGGTTTCAGTCTTACCGAACCACCAAAATGGCGAAAGTCGCCAAAACACACGAAGaCATTGAGGCCCAGATCCTGGAGATCCAGGGTATGAAGGCTGCCCTGGTGGAGGAGGGAGCAGATCAGGGTGTGGGCCTGGACTCAACTGGATATTACGACCAGGAGATCTATGGTGGCAGTGACAGCCGCTTCGCTGGATATGTCACCTCCATTGCTGCCAATGAACAGGAGGATGATGACGAGGAGGACTCTTCAACAAGTCTACTTGGACAGAAGAAACCGGGGTATCATGCTCCGGTGGCTATACTCAATGCGATACCACAGTCAGATGAACAGtacgACCCGTTCGCCGAGCACAGGCCCGCCAAGATTGCAGAGCGTGAGGACGAGTACAAGGCCAGACGACGACAGATGATCATCTCTCCGGAGCGACTCGACCCCTTTGCAGACGGGGGCAAAACGCCGGACCCAAAGCTGCAGTCCAGGTCGTACATGGATGTCATGAAGGAGCAGCACCTGACCAAAGAGGAGAAAGAGATCCGTCAGCAGATGGCAGAAAAGGCCAAGACGGGAGACCTGAAGGCTGTCAACGGCTCTGCTGCCTCCCAGGCTGCCGCTGCCGCCGCCAAGCGCAAACGTCGCTGGGACCAGACGGCCGAGAAACAGGACCAATCAGGAACCCCCAGCAACACCGGCACACCCAAGAAGATGTCTAGCTGGGACCAGGCTGACCTGTCTGCTGAGCAGACCCCAGGACACACCCCTGGCCACACCCCCTCCAACAGCCGCTGGGACGAGACCCCTGGCAGGAATAAGGGCAGCGAGACCCCAGGGGCCACTCCCAGCTCCCGGATGTGGGACCCAACCCCCAGCCACACCCCGGCCGGAGCAGCCACCCCAGGCAGGGGGGACACACCGGGACACACCACCCCCGGACATGGGGGAGCCACAGGCAGCGTGCGCAAAAACCGTTGGGATGAGACCCCCAAGACTGAGAGGGAGACCCCTGGTCATGGTAGTGGTTGGGCTGAGACTCCCCGTACAGACAGAGGAGACGAGTCTGTGGGAGAGACCCCCACCCCCGGGGCCAGTAAGAGGAAGTCCCGTTGGGACGAGACCCCTGCCAGCCAGATGGGCTCTTCCACTCCACTGATGACCCCTGGGAAGACCCCCATTGGAACCCCTGCCATGAATATGGCCACTCCCTCTCCAGGTCACCTGATGAGCATGACCCCAGAGCAGCTGCAGGCGTGGCGTTGGGAGAGGGAGATCGATGAGAGAAACCGACCTCTCACAGACGATGAGCTGGACGCCATGTTCCCAGAGGGATACAAGGTCCTTCCCCCACCAGCAGGCTATGTGCCCATCCGTACCCCGGCCCGGAAGCTGTCTGCCACACCCACCCCCATGGGGGGCATGACGGGCTTCCACATGCAGCAGGAGGACCGCTCCATGAAGCAGATCAACGACCAGCCCAGTGGGAACCTGCCCTTCCTCAAACCAGACGACATCCAGTACTTTGATAAACTGCTGGTTGAGGTAGATGAGTCCACTCTGAGCCCAGAGGAACAGAAGGAGCGTAAGATCATGAAACTGCTGCTGAAGATCAAGAACGGAACACCTCCCATGAGAAAGGCTGCCCTGCGTCAGATCACAGACAAGGCGAGGGAGTTTGGAGCAGGGCCCCTGTTCAACCAGATCCTGCCCCTGCTCATGTCTCCTACTCTGGAGGACCAGGAGCGTCACCTACTGGTCAAGGTCATTGACCGCATCCTCTACAAGCTGGACGATCTCGTCCGCCCATACGTACACAagATCCTGGTGGTGATTGAGCCCCTGCTGATTGATGAAGATTACTACGCCCGAGTGGAGGGCAGAGAGATCATCTCTAACTTGGCCAAGGCTGCCGGCCTGGCCACTATGATCTCCACCATGAGGCCTGATATTGACAACATGGACGAgtatgtcagaaatacaacagcCAGAGCTTTCGCTGTCGTAGCGTCCGCTCTGGGTATCCCATCCCTGCTGCCCTTCCTCAAGGCTGTGTGTAAGAGCAAGAAGTCATGGCAGGCCCGCCACACGGGCATCAAGATTGTCCAGCAGATCGCCATCCTCATGGGTTGTGCCATCCTGCCCCATCTGAGGAGTCTGGTGGAGATCATCGAGCATGGTCTGGTGGATGAGCAGCAGAAGGTGCGGACCATCAGTGCCCTTGCCATTGCTGCCCTGGCGGAGGCTGCCACTCCCTACGGTATCGAGTCCTTTGACTCCGTACTCAAACCCCTATGGAAGGGTATCAGACAGCACAGAGGAAAGGGTCTGGCTGCGTTCCTGAAGGCCATTGGCTACCTGATCCCTCTAATGGATGCTGAGTATGCTAACTACTACACCAGAGAGGTCATGCTGATCCTCATCAGAGAGTTCCAGTCCCCTGACGAGGAGATGAAGAAGATCGTGCTCAAGGTGGTGAAACAGTGCTGTGGTACTGACGGTGTGGAGGCCAACTACATCAAGACAGAGATCCTGCCCCCCTTCTTCAAGCACTTCTGGCAGCACAGGATGGCCCTGGACAGACGCAACTACAGACAGctGGTGGACACCACAGTAGAGCTGGCCAACAAGGTGGGAGCAGCAGAGATCATCTCTCGTATAGTAGATGACCTGAAGGACGAGGCAGAGCAGTACAGGAAGATGGTGATGGAGACCATAGAGAAGATCATGGGGAACCTGGGAGCTGCTGACATCGACCACAAGCTGGAGGAGCAGCTGATCGACGGCATCCTGTACGCCTTCCAGGAACAGACCACTGAGGACTCTGTAATGCTGAACGGGTTTGGCACGGTGGTGAATGCCCTGGGGAAGAGGGTGAAGCCCTACCTGCCTCAGATCTGTGGTACGGTACTGTGGCGTCTCAACAACAAGTCTGCCAAGGTCCGCCAGCAGGCAGCTGACCTCATCTCTCGTACCGCCGTGGTCATGAAGACCTGCCAGGAGGAGAAGCTGATGGGTCACCTGGGAGTGGTGTTATATGAGTACCTAGGAGAGGAGTATCCTGAAGTACTGGGAAGCATCCTCGGTGCTCTCAAGGCCATCGTCAACGTCATCGGCATGCATAAGATGACTCCACCAATCAAAGACCTGCTGCCGCGCCTGACGCCAATCTTGAAGAACAGACATGAGAAGGTGCAGGAGAACTGTATTGACCTGGTGGGCAGGATTGCTGACAGGGGTGCTGAGTACGTGTCGGCCAGGGAGTGGATGCGGATCTGTTTTGAGCTGCTGGAGCTCCTCAAGGCCCACAAGAAGGCCATCCGCAGAGCCACTGTCAACACCTTTGGATACATCGCCAAGGCTATCGGaccCCATGACGTGCTGGCCACACTACTAAACAACCTGAAGGTTCAGGAGCGTCAGAACAGAGTGTGTACCACTGTAGCCATCGCCATCGTGGCTGAGACCTGTTCTCCCTTCACCGTGCTCCCCGCGCTCATGAATGAGTACCGCGTGCCAGAGCTCAACGTGCAGAACGGCGTGCTCAAGTCCCTCTCCTTCCTGTTTGAGTACATTGGGGAGATGGGCAAGGACTACATTTACGCTGTCACGCCCCTGCTGGAGGATGCACTGATGGACAGAGACTTggtccacagacagacagccagtgcCGTGGTGCAGCACATGTCCCTGGGCGTCTACGGCTTCGGCTGTGAAGACTCGCTCAACCACCTGCTCAACTATGTGTGGCCCAACGTGTTTGAGACGTCGCCCCACGTCATCCAGGCTGTGATGGGGGCCTTGGAAGGCCTCAGGGTGGCCATCGGCCCCTGCCGCATGCTGCAGTATTGCCTACAGGGTCTGTTCCACCCAGCCAGGAAGGTGCGAGACGTCTACTGGAAGATCTACAACTCTATCTACATCGGCTCCCAGGATGCTCTCATTGCTCATTACCCACACGTCTACAACGATGAGAAGAACCCTTACCTCCGCTATGAGCTGGAGTACTTCTTGTGATTCTGCTCTTCTCACTCTGAcgatttctctccctcttctctttgtCCTATCTCTCTTTGTGTATAGGACTTGGtccattttttatattatttatctCCTCTGTCTTTGTAGTGGTTGTATCCAACACAGCCACAGTGGCTGTGGCCTGAGATTGATTTTTAATACAATAAAAACTGTGTATGATAGGGAAATGGAGTATAAAATGGAACAACTTCTTAGAGCTTGTAtgtattgttttgttttctcCTTTTTCTAATCATTTCTATAAGGAatgacagacagtacagtagatgGAGTGCAGGCTCTAAGTTAGCCTTGTTATGGAATGGAAAAGCAACTCAGTGAAACTCTTTAAAATATTGTCATGGTTTCTTTTTACCGGCCTTGACCATTCCTTCTCAATGCTTTGCTCGCTTATCAGTGATCACCCCCCTGTTCTTATCAGAATGTTGCTTTATTTGACTGAATAAACGTTTGTGTATAAAATAAAA
>XM_021597412.2
CCCTCTCTCCCTTATCCCATGGCTGCCTTTCAAGAGTTTCAACCCACCTCTTGTTGCTTAGCCCTTCGAGCACTGTGCAACGGCTTGCTCCCCAGACTAAGACCTTCCCGTGGTAATCTTTCCTGGCCCGAGGGCGGTTGGTTCTCTTGTCACTGCGCCTTTTATCACTCATCATTTTCTCTCAATAAAATCTCTTTGCTTTGAGGCAAACGGTCTGCGATGCAGATACAAGGTTTTTTTCTTCTTGGAAAATGACAATAATTGTAAACAGGATTTAAGTAGCATAAAATAAATGTCTGCCAGTGAGGGGTTCCATTTTGTTTTAGGGAGAGGTGGTTTGCGGTTGTCTTGGTTAGACTTTCGTACCGAACACTacatgggtggcaggtagcttgtGTGTGTCTCGAAGGGTTAACATACCCATGTGGCTATCTCATGTACTGATGGTGGAAAGAACTGTCTTACTCTTAAGAAAGGTATTAAGTAATGTGAGTAGCAAAGAAAATAAACTTCTATATGGGGTTGATGGTCAACTTTGGGGTAATTCACCTGCTCGTGCAATATGCTGCACCCTACTGTGCCCAGTAGGCGGGAACACAATGACCCCATACACACCACCCCAGAAACGTGCTGGCTGTATGAAGCTTGGCTCCAAGTCACTGAAAGCCCCTAGATGGCAGACCACCTGGGTACAGATCTGAAGTATTTCTGTGTAGAACAAGAACACATAAAATGAGCAATGCAATCAGACCACCCCTTTTCTTCCAAGTGGCCCTTCCTTCACTACAGTATCATTGTGCAGGCTTATGGTCAGTTACCACCACTGTTGGCTTGTCAGATTTCTAGGGGTTGGGGAACTTCCATTAGAAAAGGACAGGACGTCACAAATTATGTGTATGTCATCAACATTACTGAGTTATGGTCTCAGATTTCAACACACATTTAATTGGCTTTTGGTCCAAGTCGGTTCAGGCGTCGTAACTTGGACTCCAAGTGTGTGATTTAATAGAGTGAATTACAATTGCGGTTTAATCTTTGGCAATGGGCTTGTCTTGCCCCTTACCCCTCACAGGGGCAAGGAGCCGTCAACTAGCTATATTCACATTCCTCAAAGCCTAAATGAACTGAATAGTCCATCAGTTAACAAGGAGGGCCTGTCTCTCAAAATACGGCTTGACTAGCCATTGAGCATTTGATTAACTAAGCACACACATTCTAGAATAGGATTAAGGTATTTATCTACACAATGCAACAATTTGTTTGTAGCGACTGAAGCACCCATGTCTCTTTTCTGAGATGAAGTGGCCTCAGTGCCTCTATGTAGTCTGGGTAGGCCTGTATCAAGCCTGCATGTAGACAGCTCTGTCATATACAAAGATGTTGTGTAAATATATTTCTATTTTACATCTTTGTAAAATAGAAACATATCAAGAAATCTGTGTGCCGCAATTCCACAGGCCCATACTAACTGTCCTTAATTTCTCTCCTACAGCAGTACTGCTTTGCCAGTCCTGTACTGCACTCTCTTAAGGGTGCAGCAACTCATCCTGTGTAGGTTATGGTGAACAGACAGAAGCGTGTGCTTGTCAGTTTTGTCAGGGTCCGCTGGTGGTCTGTCTGGGTGGGGGGCAGCTCTTACTCAATAAACCTCTACCATAAGAACCTTTTTAATTTTGTCTTCTACCCTAGACTTTATATCATTAcatttaaattacatttaaatttCATGGTAGTCTTTTGCTTTAGATTGATTTTGTAATTCGTAATGAATTTaaagaatatatatttttctaaaaaGGAAGCCAAGATCTACGTTTACGAAGTTGAAATAGTAATCGACTGATGTCAAACTACCAGCTGCTTAGTAGCAGGcagcctgtcccccccccccccctcctggaACTAATCGTAGCCTTCACGGCCCCTGATGTAAACGTGTAACTACATATAGATGCTCTCCCTACCCTGGGTTACATAAAGTAGCTACACATTTATCTCACAAGAAGATTCCTAGATTTGGGAACAATTTAGATTTTAATTTTATTAATCAATACTTCACAATCTAGAGGGTATTTTAcatattttcatttatttaagGTTTGAGCCCCAGGAGGATTTTTCTTTTGAGTGACGTAAAAAGAAATCACAGGTGGTATGCTTATGTGTGTGAGTTCCAACCCTTTTCCAAAGTGTTACTAATGGTAAAGAGACATTTTCTAGGCTTCTTTTCTGCCGGTTGAAGTCTGACTGCAGAAGGACCCTTGGCACTGAAAGTGGGGCAAAACGCCGGACCCAAAGCTGCAGTCCAGGTCGTACATGGATGTCATGAAGGAGCAGCACCTGACCAAAGAGGAGAAAGAGATCCGTCAGCAGATGGCAGAAAAGGCCAAGACGGGAGACCTGAAGGCTGTCAACGGCTCTGCTGCCTCCCAGGCTGCCGCTGCCGCCGCCAAGCGCAAACGTCGCTGGGACCAGACGGCCGAGAAACAGGACCAATCAGGAACCCCCAGCAACACCGGCACACCCAAGAAGATGTCTAGCTGGGACCAGGCTGACCTGTCTGCTGAGCAGACCCCAGGACACACCCCTGGCCACACCCCCTCCAACAGCCGCTGGGACGAGACCCCTGGCAGGAATAAGGGCAGCGAGACCCCAGGGGCCACTCCCAGCTCCCGGATGTGGGACCCAACCCCCAGCCACACCCCGGCCGGAGCAGCCACCCCAGGCAGGGGGGACACACCGGGACACACCACCCCCGGACATGGGGGAGCCACAGGCAGCGTGCGCAAAAACCGTTGGGATGAGACCCCCAAGACTGAGAGGGAGACCCCTGGTCATGGTAGTGGTTGGGCTGAGACTCCCCGTACAGACAGAGGAGACGAGTCTGTGGGAGAGACCCCCACCCCCGGGGCCAGTAAGAGGAAGTCCCGTTGGGACGAGACCCCTGCCAGCCAGATGGGCTCTTCCACTCCACTGATGACCCCTGGGAAGACCCCCATTGGAACCCCTGCCATGAATATGGCCACTCCCTCTCCAGGTCACCTGATGAGCATGACCCCAGAGCAGCTGCAGGCGTGGCGTTGGGAGAGGGAGATCGATGAGAGAAACCGACCTCTCACAGACGATGAGCTGGACGCCATGTTCCCAGAGGGATACAAGGTCCTTCCCCCACCAGCAGGCTATGTGCCCATCCGTACCCCGGCCCGGAAGCTGTCTGCCACACCCACCCCCATGGGGGGCATGACGGGCTTCCACATGCAGCAGGAGGACCGCTCCATGAAGCAGATCAACGACCAGCCCAGTGGGAACCTGCCCTTCCTCAAACCAGACGACATCCAGTACTTTGATAAACTGCTGGTTGAGGTAGATGAGTCCACTCTGAGCCCAGAGGAACAGAAGGAGCGTAAGATCATGAAACTGCTGCTGAAGATCAAGAACGGAACACCTCCCATGAGAAAGGCTGCCCTGCGTCAGATCACAGACAAGGCGAGGGAGTTTGGAGCAGGGCCCCTGTTCAACCAGATCCTGCCCCTGCTCATGTCTCCTACTCTGGAGGACCAGGAGCGTCACCTACTGGTCAAGGTCATTGACCGCATCCTCTACAAGCTGGACGATCTCGTCCGCCCATACGTACACAagATCCTGGTGGTGATTGAGCCCCTGCTGATTGATGAAGATTACTACGCCCGAGTGGAGGGCAGAGAGATCATCTCTAACTTGGCCAAGGCTGCCGGCCTGGCCACTATGATCTCCACCATGAGGCCTGATATTGACAACATGGACGAgtatgtcagaaatacaacagcCAGAGCTTTCGCTGTCGTAGCGTCCGCTCTGGGTATCCCATCCCTGCTGCCCTTCCTCAAGGCTGTGTGTAAGAGCAAGAAGTCATGGCAGGCCCGCCACACGGGCATCAAGATTGTCCAGCAGATCGCCATCCTCATGGGTTGTGCCATCCTGCCCCATCTGAGGAGTCTGGTGGAGATCATCGAGCATGGTCTGGTGGATGAGCAGCAGAAGGTGCGGACCATCAGTGCCCTTGCCATTGCTGCCCTGGCGGAGGCTGCCACTCCCTACGGTATCGAGTCCTTTGACTCCGTACTCAAACCCCTATGGAAGGGTATCAGACAGCACAGAGGAAAGGGTCTGGCTGCGTTCCTGAAGGCCATTGGCTACCTGATCCCTCTAATGGATGCTGAGTATGCTAACTACTACACCAGAGAGGTCATGCTGATCCTCATCAGAGAGTTCCAGTCCCCTGACGAGGAGATGAAGAAGATCGTGCTCAAGGTGGTGAAACAGTGCTGTGGTACTGACGGTGTGGAGGCCAACTACATCAAGACAGAGATCCTGCCCCCCTTCTTCAAGCACTTCTGGCAGCACAGGATGGCCCTGGACAGACGCAACTACAGACAGctGGTGGACACCACAGTAGAGCTGGCCAACAAGGTGGGAGCAGCAGAGATCATCTCTCGTATAGTAGATGACCTGAAGGACGAGGCAGAGCAGTACAGGAAGATGGTGATGGAGACCATAGAGAAGATCATGGGGAACCTGGGAGCTGCTGACATCGACCACAAGCTGGAGGAGCAGCTGATCGACGGCATCCTGTACGCCTTCCAGGAACAGACCACTGAGGACTCTGTAATGCTGAACGGGTTTGGCACGGTGGTGAATGCCCTGGGGAAGAGGGTGAAGCCCTACCTGCCTCAGATCTGTGGTACGGTACTGTGGCGTCTCAACAACAAGTCTGCCAAGGTCCGCCAGCAGGCAGCTGACCTCATCTCTCGTACCGCCGTGGTCATGAAGACCTGCCAGGAGGAGAAGCTGATGGGTCACCTGGGAGTGGTGTTATATGAGTACCTAGGAGAGGAGTATCCTGAAGTACTGGGAAGCATCCTCGGTGCTCTCAAGGCCATCGTCAACGTCATCGGCATGCATAAGATGACTCCACCAATCAAAGACCTGCTGCCGCGCCTGACGCCAATCTTGAAGAACAGACATGAGAAGGTGCAGGAGAACTGTATTGACCTGGTGGGCAGGATTGCTGACAGGGGTGCTGAGTACGTGTCGGCCAGGGAGTGGATGCGGATCTGTTTTGAGCTGCTGGAGCTCCTCAAGGCCCACAAGAAGGCCATCCGCAGAGCCACTGTCAACACCTTTGGATACATCGCCAAGGCTATCGGaccCCATGACGTGCTGGCCACACTACTAAACAACCTGAAGGTTCAGGAGCGTCAGAACAGAGTGTGTACCACTGTAGCCATCGCCATCGTGGCTGAGACCTGTTCTCCCTTCACCGTGCTCCCCGCGCTCATGAATGAGTACCGCGTGCCAGAGCTCAACGTGCAGAACGGCGTGCTCAAGTCCCTCTCCTTCCTGTTTGAGTACATTGGGGAGATGGGCAAGGACTACATTTACGCTGTCACGCCCCTGCTGGAGGATGCACTGATGGACAGAGACTTggtccacagacagacagccagtgcCGTGGTGCAGCACATGTCCCTGGGCGTCTACGGCTTCGGCTGTGAAGACTCGCTCAACCACCTGCTCAACTATGTGTGGCCCAACGTGTTTGAGACGTCGCCCCACGTCATCCAGGCTGTGATGGGGGCCTTGGAAGGCCTCAGGGTGGCCATCGGCCCCTGCCGCATGCTGCAGTATTGCCTACAGGGTCTGTTCCACCCAGCCAGGAAGGTGCGAGACGTCTACTGGAAGATCTACAACTCTATCTACATCGGCTCCCAGGATGCTCTCATTGCTCATTACCCACACGTCTACAACGATGAGAAGAACCCTTACCTCCGCTATGAGCTGGAGTACTTCTTGTGATTCTGCTCTTCTCACTCTGAcgatttctctccctcttctctttgtCCTATCTCTCTTTGTGTATAGGACTTGGtccattttttatattatttatctCCTCTGTCTTTGTAGTGGTTGTATCCAACACAGCCACAGTGGCTGTGGCCTGAGATTGATTTTTAATACAATAAAAACTGTGTATGATAGGGAAATGGAGTATAAAATGGAACAACTTCTTAGAGCTTGTAtgtattgttttgttttctcCTTTTTCTAATCATTTCTATAAGGAatgacagacagtacagtagatgGAGTGCAGGCTCTAAGTTAGCCTTGTTATGGAATGGAAAAGCAACTCAGTGAAACTCTTTAAAATATTGTCATGGTTTCTTTTTACCGGCCTTGACCATTCCTTCTCAATGCTTTGCTCGCTTATCAGTGATCACCCCCCTGTTCTTATCAGAATGTTGCTTTATTTGACTGAATAAACGTTTGTGTATAAAATAAAA

Function

NR:

description
splicing factor 3B subunit 1 isoform X1

GO: NA

KEGG:

id description
K12828 SF3B1, SAP155; splicing factor 3B subunit 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021597413.2 False 1769 mRNA 0.45 5 55833743 55838543
XM_021597411.2 False 4596 mRNA 0.55 23 55833744 55849324
XM_021597410.2 False 4598 mRNA 0.55 23 55833745 55849324
XM_021597412.2 True 6326 mRNA 0.51 20 55835832 55849324

Neighbor

gene id symbol gene type direction distance location
LOC110520236 LOC106586369 coding upstream 33113 55792359 ~ 55800630 (+)
rftn2 rftn2 coding upstream 54429 55741697 ~ 55779314 (+)
LOC110504295 LOC106586344 coding upstream 337155 55430193 ~ 55496588 (+)
LOC110520234 LOC106586346 coding upstream 422188 55405871 ~ 55411555 (+)
lcmt2 NA coding upstream 445021 55380671 ~ 55388722 (+)
ankrd44 LOC106586375 coding downstream 6995 55856319 ~ 55890098 (+)
LOC118962850 NA coding downstream 84239 55933563 ~ 55935062 (+)
si:dkey-57a22.11 LOC106586378 coding downstream 92983 55942307 ~ 55948120 (+)
LOC110520246 LOC106586379 coding downstream 99269 55948593 ~ 55953872 (+)
LOC110504321 LOC106586380 coding downstream 108007 55957331 ~ 55961495 (+)
G275495 NA non-coding upstream 42322 55788403 ~ 55791421 (+)
G275500 NA non-coding upstream 65330 55768059 ~ 55768413 (+)
G275498 NA non-coding upstream 65767 55766012 ~ 55767976 (+)
G275484 NA non-coding upstream 89484 55743985 ~ 55744259 (+)
G275480 NA non-coding upstream 95830 55737614 ~ 55737913 (+)
G275536 NA non-coding downstream 21374 55870698 ~ 55903415 (+)
G275544 LOC106586374 non-coding downstream 51653 55900977 ~ 55904490 (+)
G275545 NA non-coding downstream 55498 55904822 ~ 55905288 (+)
G275548 LOC106586374 non-coding downstream 60159 55909483 ~ 55910082 (+)
G275549 NA non-coding downstream 60848 55910172 ~ 55910394 (+)
LOC110520231 dbr1 other upstream 458217 55371759 ~ 55375526 (+)
G274592 NA other upstream 958628 54874399 ~ 54875115 (+)
G273094 LOC106586310 other upstream 1992126 53841264 ~ 53841617 (+)
G273004 LOC106586313 other upstream 2175060 53657461 ~ 53658683 (+)
G272965 NA other upstream 2181312 53648825 ~ 53652431 (+)
G275542 LOC106586374 other downstream 50870 55900194 ~ 55900743 (+)
G275553 LOC107595854 other downstream 66005 55915329 ~ 55916133 (+)
G277296 NA other downstream 1415243 57264567 ~ 57264892 (+)
G277973 NA other downstream 1940410 57789734 ~ 57790332 (+)
G280315 NA other downstream 4203392 60052716 ~ 60054417 (+)

Expression


Co-expression Network