Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964369 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 55843754 ~ 55843823 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005051418.1 | True | 70 | mRNA | 0.44 | 1 | 55843754 | 55843823 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964367 | NA | coding | upstream | 1411 | 55842205 ~ 55842343 (+) |
| LOC110520236 | LOC106586369 | coding | upstream | 43124 | 55792359 ~ 55800630 (+) |
| rftn2 | rftn2 | coding | upstream | 64440 | 55741697 ~ 55779314 (+) |
| LOC110504295 | LOC106586344 | coding | upstream | 347166 | 55430193 ~ 55496588 (+) |
| LOC110520234 | LOC106586346 | coding | upstream | 432199 | 55405871 ~ 55411555 (+) |
| ankrd44 | LOC106586375 | coding | downstream | 12496 | 55856319 ~ 55890098 (+) |
| LOC118962850 | NA | coding | downstream | 89740 | 55933563 ~ 55935062 (+) |
| si:dkey-57a22.11 | LOC106586378 | coding | downstream | 98484 | 55942307 ~ 55948120 (+) |
| LOC110520246 | LOC106586379 | coding | downstream | 104770 | 55948593 ~ 55953872 (+) |
| LOC110504321 | LOC106586380 | coding | downstream | 113508 | 55957331 ~ 55961495 (+) |
| G275495 | NA | non-coding | upstream | 52333 | 55788403 ~ 55791421 (+) |
| G275500 | NA | non-coding | upstream | 75341 | 55768059 ~ 55768413 (+) |
| G275498 | NA | non-coding | upstream | 75778 | 55766012 ~ 55767976 (+) |
| G275484 | NA | non-coding | upstream | 99495 | 55743985 ~ 55744259 (+) |
| G275480 | NA | non-coding | upstream | 105841 | 55737614 ~ 55737913 (+) |
| G275536 | NA | non-coding | downstream | 26875 | 55870698 ~ 55903415 (+) |
| G275544 | LOC106586374 | non-coding | downstream | 57154 | 55900977 ~ 55904490 (+) |
| G275545 | NA | non-coding | downstream | 60999 | 55904822 ~ 55905288 (+) |
| G275548 | LOC106586374 | non-coding | downstream | 65660 | 55909483 ~ 55910082 (+) |
| G275549 | NA | non-coding | downstream | 66349 | 55910172 ~ 55910394 (+) |
| LOC110520231 | dbr1 | other | upstream | 468228 | 55371759 ~ 55375526 (+) |
| G274592 | NA | other | upstream | 968639 | 54874399 ~ 54875115 (+) |
| G273094 | LOC106586310 | other | upstream | 2002137 | 53841264 ~ 53841617 (+) |
| G273004 | LOC106586313 | other | upstream | 2185071 | 53657461 ~ 53658683 (+) |
| G272965 | NA | other | upstream | 2191323 | 53648825 ~ 53652431 (+) |
| G275542 | LOC106586374 | other | downstream | 56371 | 55900194 ~ 55900743 (+) |
| G275553 | LOC107595854 | other | downstream | 71506 | 55915329 ~ 55916133 (+) |
| G277296 | NA | other | downstream | 1420744 | 57264567 ~ 57264892 (+) |
| G277973 | NA | other | downstream | 1945911 | 57789734 ~ 57790332 (+) |
| G280315 | NA | other | downstream | 4208893 | 60052716 ~ 60054417 (+) |
