Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110505355 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 56439866 ~ 56440949 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002470740.2 | True | 859 | mRNA | 0.39 | 3 | 56439866 | 56440949 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| itgb5 | LOC106586391 | coding | upstream | 4940 | 56338028 ~ 56434926 (+) |
| LOC110520256 | rbm44 | coding | upstream | 103796 | 56329311 ~ 56336070 (+) |
| LOC118936648 | rbm44 | coding | upstream | 110514 | 56325002 ~ 56329352 (+) |
| etv5a | LOC106586388 | coding | upstream | 119148 | 56303426 ~ 56320718 (+) |
| LOC110504343 | LOC106586387 | coding | upstream | 150680 | 56139812 ~ 56289186 (+) |
| tnfaip6 | tsg6 | coding | downstream | 13055 | 56454004 ~ 56462796 (+) |
| rif1 | LOC106586392 | coding | downstream | 22439 | 56463388 ~ 56494844 (+) |
| LOC110520266 | phs1 | coding | downstream | 227184 | 56668133 ~ 56680567 (+) |
| adcy5 | LOC106586396 | coding | downstream | 242115 | 56683064 ~ 56818530 (+) |
| sema5ba | LOC106586418 | coding | downstream | 476503 | 56917452 ~ 57105517 (+) |
| G275846 | NA | non-coding | upstream | 14950 | 56424013 ~ 56424916 (+) |
| G275776 | NA | non-coding | upstream | 130203 | 56308307 ~ 56309663 (+) |
| G275673 | NA | non-coding | upstream | 144649 | 56292849 ~ 56295217 (+) |
| G275722 | NA | non-coding | upstream | 220010 | 56219643 ~ 56219856 (+) |
| G275720 | NA | non-coding | upstream | 221490 | 56217653 ~ 56218376 (+) |
| G275860 | NA | non-coding | downstream | 6647 | 56447596 ~ 56447865 (+) |
| G275863 | NA | non-coding | downstream | 10928 | 56451877 ~ 56452654 (+) |
| G275870 | NA | non-coding | downstream | 35419 | 56476368 ~ 56477171 (+) |
| G275871 | NA | non-coding | downstream | 36978 | 56477927 ~ 56478418 (+) |
| G275875 | LOC100194727 | non-coding | downstream | 59263 | 56500212 ~ 56509613 (+) |
| G275553 | LOC107595854 | other | upstream | 523733 | 55915329 ~ 55916133 (+) |
| G275542 | LOC106586374 | other | upstream | 539123 | 55900194 ~ 55900743 (+) |
| LOC110520231 | dbr1 | other | upstream | 1064340 | 55371759 ~ 55375526 (+) |
| G274592 | NA | other | upstream | 1564751 | 54874399 ~ 54875115 (+) |
| G273094 | LOC106586310 | other | upstream | 2598249 | 53841264 ~ 53841617 (+) |
| G277296 | NA | other | downstream | 823618 | 57264567 ~ 57264892 (+) |
| G277973 | NA | other | downstream | 1348785 | 57789734 ~ 57790332 (+) |
| G280315 | NA | other | downstream | 3611767 | 60052716 ~ 60054417 (+) |
| G281141 | NA | other | downstream | 3846439 | 60287388 ~ 60303967 (+) |
| G281591 | LOC106586456 | other | downstream | 4299290 | 60740239 ~ 60757350 (+) |
