Item | Value |
---|---|
gene id | LOC110520281 |
gene name | LOC106586425 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048567.1 |
NCBI id | CM023221.2 |
chromosome length | 85311031 |
location | 57416082 ~ 57427344 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A-like isoform X1 |
id | description |
---|---|
K13761 | PDE9; high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036974749.1 | False | 3092 | mRNA | 0.43 | 13 | 57416082 | 57426715 |
XM_036974747.1 | False | 2278 | mRNA | 0.45 | 14 | 57416082 | 57427276 |
XM_036974748.1 | False | 2272 | mRNA | 0.45 | 14 | 57416082 | 57427276 |
XM_036974746.1 | True | 2358 | mRNA | 0.45 | 14 | 57416082 | 57427344 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110505369 | LOC106586424 | coding | downstream | 1768 | 57409981 ~ 57414314 (-) |
LOC118963713 | NA | coding | downstream | 79784 | 57332568 ~ 57336298 (-) |
LOC110520278 | LOC106586422 | coding | downstream | 85686 | 57321238 ~ 57330396 (-) |
si:dkey-91i10.3 | LOC106586420 | coding | downstream | 124555 | 57270782 ~ 57297762 (-) |
LOC110520276 | LOC106586419 | coding | downstream | 155843 | 57232633 ~ 57260239 (-) |
LOC118964377 | NA | coding | upstream | 54252 | 57481596 ~ 57481720 (-) |
LOC110520284 | LOC106586429 | coding | upstream | 171202 | 57595333 ~ 57609026 (-) |
LOC110520285 | LOC106586430 | coding | upstream | 204796 | 57632140 ~ 57734917 (-) |
LOC110520286 | LOC106586431 | coding | upstream | 482263 | 57909607 ~ 57919306 (-) |
si:dkey-3d4.3 | LOC106586432 | coding | upstream | 506726 | 57934070 ~ 57943312 (-) |
G277676 | NA | non-coding | downstream | 11625 | 57404228 ~ 57404457 (-) |
G277675 | NA | non-coding | downstream | 14973 | 57400899 ~ 57401109 (-) |
G277671 | NA | non-coding | downstream | 18705 | 57396985 ~ 57397377 (-) |
G277666 | NA | non-coding | downstream | 24913 | 57390935 ~ 57391169 (-) |
G277662 | LOC106586423 | non-coding | downstream | 33321 | 57380911 ~ 57382761 (-) |
G277642 | NA | non-coding | upstream | 9362 | 57436706 ~ 57436977 (-) |
G277692 | NA | non-coding | upstream | 20392 | 57447736 ~ 57448421 (-) |
G277700 | NA | non-coding | upstream | 28042 | 57455386 ~ 57506250 (-) |
G277765 | LOC106586426 | non-coding | upstream | 92810 | 57520154 ~ 57522613 (-) |
G277773 | LOC106586426 | non-coding | upstream | 106475 | 57533819 ~ 57534557 (-) |
G277673 | LOC106586423 | other | downstream | 12507 | 57402984 ~ 57403575 (-) |
G275250 | NA | other | downstream | 2004595 | 55410143 ~ 55411487 (-) |
LOC110520227 | plekhm3 | other | downstream | 2296870 | 55068639 ~ 55122013 (-) |
G274344 | LOC106586294 | other | downstream | 2733277 | 54679918 ~ 54682805 (-) |
G277749 | LOC106586429 | other | upstream | 157042 | 57584386 ~ 57589183 (-) |
G284018 | NA | other | upstream | 5287231 | 62714575 ~ 62715177 (-) |
G286522 | NA | other | upstream | 7542205 | 64969549 ~ 64970755 (-) |
G286580 | marco | other | upstream | 7586915 | 65014259 ~ 65029736 (-) |
G286638 | NA | other | upstream | 7627356 | 65054700 ~ 65075985 (-) |